FFCP PHASE1:Hg19::chr13:110958091..110958117,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:110958091..110958117,+ to FFCP PHASE1:Hg19::chr13:110958091..110958117,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1284 | |EntrezGene=1284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2203 | |HGNC=2203 | ||
|TSSclassifier=strong | |||
|UniProt=A2A352 | |UniProt=A2A352 | ||
|association_with_transcript=-41bp_to_ENST00000400163_5end | |||
|cluster_id=chr13:110958091..110958117,+ | |||
|description=CAGE_peak_7_at_COL4A2_5end | |||
|id=chr13:110958091..110958117,+ | |||
|ontology_enrichment_celltype=CL:1000449!6.59e-10!16;CL:0002681!8.39e-09!13;CL:0002584!8.39e-09!13;CL:1000497!2.53e-08!18;CL:0002518!2.53e-08!18;CL:1000612!1.06e-07!7;CL:1000746!1.06e-07!7;CL:0000222!5.61e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.64e-14;15!CL:1000507;8.73e-14;10!CL:1000494;8.73e-14;10!CL:1000497;1.38e-12;17!CL:0002518;1.38e-12;17!CL:0002681;4.73e-11;12!CL:0002584;4.73e-11;12!CL:0000708;1.69e-09;3!CL:0002144;1.09e-08;3!CL:0002138;1.00e-07;6!CL:0000669;2.48e-07;4!CL:0002262;5.11e-07;2!CL:1000398;5.11e-07;2!CL:0002554;6.10e-07;2!CL:1000746;7.98e-07;7!CL:1000612;7.98e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.83e-14,15;CL:1000507,8.01e-14,10;CL:1000494,8.01e-14,10;CL:1000497,1.52e-12,17;CL:0002518,1.52e-12,17;CL:0002681,5.54e-11,12;CL:0002584,5.54e-11,12;CL:0000708,1.39e-09,3;CL:0002144,7.45e-09,3;CL:0000213,1.40e-08,58;CL:0000215,1.40e-08,58;CL:0005020,1.06e-07,6;CL:0002138,1.06e-07,6;CL:0005022,1.06e-07,6;CL:0000669,2.55e-07,4;CL:0000115,2.77e-07,36;CL:0002262,3.49e-07,2;CL:1000398,3.49e-07,2;CL:0002554,5.96e-07,2;CL:0002195,6.90e-07,2;CL:0002571,6.90e-07,2;CL:1000746,9.59e-07,7;CL:1000612,9.59e-07,7 | |||
|ontology_enrichment_development_v019=CL:0005022;1.00e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000353!4.23e-12!17;UBERON:0003887!8.88e-11!21;UBERON:0002417!9.75e-11!61;UBERON:0000916!9.75e-11!61;UBERON:0006555!1.55e-10!17;UBERON:0005103!1.55e-10!17;UBERON:0000083!1.55e-10!17;UBERON:0009201!1.55e-10!17;UBERON:0004819!1.55e-10!17;UBERON:0006553!1.55e-10!17;UBERON:0003074!1.55e-10!17;UBERON:0003060!1.55e-10!17;UBERON:0004211!6.59e-10!16;UBERON:0001285!6.59e-10!16;UBERON:0007684!6.59e-10!16;UBERON:0003220!6.59e-10!16;UBERON:0004208!6.59e-10!16;UBERON:0000080!1.10e-09!18;UBERON:0002120!1.10e-09!18;UBERON:0004875!1.10e-09!18;UBERON:0005721!1.10e-09!18;UBERON:0005754!1.10e-09!18;UBERON:0007297!1.10e-09!18;UBERON:0001009!3.88e-09!113;UBERON:0001225!8.39e-09!13;UBERON:0008987!8.39e-09!13;UBERON:0003886!1.49e-08!63;UBERON:0005172!1.53e-08!55;UBERON:0005173!1.53e-08!55;UBERON:0003914!2.63e-08!118;UBERON:0004876!2.98e-08!20;UBERON:0004535!4.29e-08!110;UBERON:0002553!4.98e-08!70;UBERON:0000489!5.24e-08!32;UBERON:0003103!5.43e-08!69;UBERON:0009569!5.62e-08!113;UBERON:0002049!5.65e-08!79;UBERON:0007798!5.65e-08!79;UBERON:0002113!9.68e-08!27;UBERON:0003918!9.68e-08!27;UBERON:0005095!9.68e-08!27;UBERON:0007687!9.68e-08!27;UBERON:0000074!1.06e-07!7;UBERON:0001229!1.06e-07!7;UBERON:0001230!1.06e-07!7;UBERON:0005749!1.06e-07!7;UBERON:0004199!1.06e-07!7;UBERON:0004209!1.06e-07!7;UBERON:0004198!1.06e-07!7;UBERON:0000466!1.32e-07!126;UBERON:0001851!1.42e-07!16;UBERON:0000464!6.19e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.64e-14;15!UBERON:0004819;1.64e-14;15!UBERON:0001285;1.64e-14;15!UBERON:0007684;1.64e-14;15!UBERON:0000353;2.67e-14;15!UBERON:0004211;8.73e-14;10!UBERON:0009773;8.73e-14;10!UBERON:0001231;8.73e-14;10!UBERON:0004810;8.73e-14;10!UBERON:0001473;1.91e-12;8!UBERON:0004536;1.91e-12;8!UBERON:0006558;1.91e-12;8!UBERON:0001225;4.73e-11;12!UBERON:0008987;4.73e-11;12!UBERON:0002113;2.72e-10;24!UBERON:0011143;2.72e-10;24!UBERON:0002331;6.26e-10;10!UBERON:0002465;8.26e-10;10!UBERON:0003210;1.69e-09;3!UBERON:0005172;1.88e-09;52!UBERON:0005173;1.88e-09;52!UBERON:0010523;1.09e-08;3!UBERON:0001915;1.09e-08;3!UBERON:0001982;1.09e-08;3!UBERON:0001851;1.27e-08;15!UBERON:0002417;3.04e-08;58!UBERON:0000916;3.04e-08;58!UBERON:0000489;3.68e-08;29!UBERON:0000478;6.43e-08;24!UBERON:0006554;8.03e-08;30!UBERON:0001008;8.03e-08;30!UBERON:0001281;5.11e-07;2!UBERON:0003497;5.11e-07;2!UBERON:0003909;5.11e-07;2!UBERON:0003835;5.11e-07;2!UBERON:0000074;7.98e-07;7!UBERON:0001229;7.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.83e-14,15;UBERON:0009773,1.83e-14,15;UBERON:0001231,1.83e-14,15;UBERON:0001285,1.83e-14,15;UBERON:0007684,1.83e-14,15;UBERON:0004208,1.83e-14,15;UBERON:0002417,2.35e-14,60;UBERON:0000916,2.35e-14,60;UBERON:0000353,2.55e-14,15;UBERON:0004810,8.01e-14,10;UBERON:0006555,1.92e-13,16;UBERON:0004819,1.92e-13,16;UBERON:0005172,3.35e-13,54;UBERON:0005173,3.35e-13,54;UBERON:0001473,2.02e-12,8;UBERON:0004536,2.02e-12,8;UBERON:0006558,2.02e-12,8;UBERON:0001225,5.54e-11,12;UBERON:0008987,5.54e-11,12;UBERON:0002465,8.59e-10,10;UBERON:0002331,9.62e-10,10;UBERON:0000358,9.62e-10,10;UBERON:0000307,9.62e-10,10;UBERON:0000091,9.62e-10,10;UBERON:0000087,9.62e-10,10;UBERON:0007010,9.62e-10,10;UBERON:0007806,9.62e-10,10;UBERON:0008780,9.62e-10,10;UBERON:0005728,9.62e-10,10;UBERON:0003210,1.39e-09,3;UBERON:0002113,2.31e-09,26;UBERON:0003918,2.31e-09,26;UBERON:0011143,2.31e-09,26;UBERON:0005095,2.31e-09,26;UBERON:0007687,2.31e-09,26;UBERON:0010523,7.45e-09,3;UBERON:0001915,7.45e-09,3;UBERON:0001982,7.45e-09,3;UBERON:0001851,1.44e-08,15;UBERON:0003887,2.71e-08,12;UBERON:0000478,6.23e-08,24;UBERON:0000489,1.60e-07,31;UBERON:0001281,3.49e-07,2;UBERON:0003497,3.49e-07,2;UBERON:0003909,3.49e-07,2;UBERON:0003835,3.49e-07,2;UBERON:0010532,9.59e-07,7;UBERON:0000074,9.59e-07,7;UBERON:0001229,9.59e-07,7;UBERON:0001230,9.59e-07,7;UBERON:0003220,9.59e-07,7;UBERON:0005749,9.59e-07,7;UBERON:0004199,9.59e-07,7;UBERON:0004209,9.59e-07,7;UBERON:0004198,9.59e-07,7 | |||
|phase1_expression=0,0.642301571672949,1.83240725324762,1.0007329835313,0.446961094427288,0,2.53299878168311,0.631719873426831,0.783556884599516,0.737201809504527,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,0.50133791063589,0,0,0,0,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,1.00416183829401,1.61131726843659,1.52054421143703,1.70843440283719,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0,0.354668382198357,0,2.1349799145941,2.22000793575444,0,0.808264032418128,0,7.87058623753643,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,6.37112953356618,1.43723628363248,0,0,0,0,0,0,0.567160915800105,1.07633781413317,0.427114777637135,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,0.757301322732344,0.0920498986422993,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,2.80483547606892,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,1.62302566965108,4.10930429825376,5.34155856715973,1.38895653772983,1.90254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,3.4214489204541,0,0.300343057843917,0,3.58819469905154,2.1798003441664,1.7601188597028,0.904902010304444,0,1.690605505112,1.86156681609409,0,0,0,0,2.85955987316295,1.08524321078289,0,3.25736184293735,1.77695974371273,0.791951872933429,2.1100756394171,0,1.79951384127703,0,0,0,1.19812427745791,1.14861935834114,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,0,1.03985430765404,0.535286966391485,0.157702415033935,0.35142424497814,0,2.27407504055985,0,0,0,0,7.44044398358414,0.686286847621712,0,0,0,0,0,0,0,0.767309866440312,0,0.256278298511402,0,0.804269605718038,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,3.60959690325929,2.69553679865452,5.49044838423799,0,3.79985864014353,1.13733384070897,0.850468526382578,0.647747748306418,6.16909010761157,1.62567862526312,2.00675909541941,0.254876273045038,0,1.34324852833307,0.219259876645935,0,0.256450125116389,0.984043937099117,0.325378394664303,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,2.21465597303108,0.762520775695299,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0,0.404364963146632,0,0,1.95053495635836,0.487426979262569,0,0.818999468447914,0,0,0,0,0,0.578775534266688,0,0.608731130888112,0,0.281695602532241,0,0.392996164052485,0.7133421029625,0,0,0,0,0.349934720244983,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,1.6156375993759,0,0.638002319463839,1.28236630762607,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0,0,5.33738031625119,2.71840665682306,3.55034628318548,0,0,0,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0.446342914883745,0.403100834920358,4.68389848605125,0,0,0,0,0.196854963029498,0,0,0.408610218334727,0,0,0,0,0,0,0,0.630445658393585,1.78345599658994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0.320362237703084,0.78602152549833,0,0,0,0,0,0,0.5013797880454,1.22538230705385,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,1.06336685823198,0,0,0,0.406870733204662,0.545545977607678,0.214821114084977,0,2.78667122089031,0,0,0,6.30924491143255,0,0.214441591374926,1.04397716786085,0,0,0,0.179088841081487,1.54400723580486,0,0,0.192914038270915,0,2.04993214870357,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,1.95145214357805,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,1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| ||
|short_description=p7@COL4A2 | |||
}} | }} |
Latest revision as of 12:35, 16 September 2015
Short description: | p7@COL4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COL4A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000400163_5end |
EntrezGene: | COL4A2 |
HGNC: | 2203 |
UniProt: | A2A352 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.83e-14 | 15 |
kidney tubule cell | 8.01e-14 | 10 |
nephron tubule epithelial cell | 8.01e-14 | 10 |
kidney cell | 1.52e-12 | 17 |
kidney epithelial cell | 1.52e-12 | 17 |
kidney cortical cell | 5.54e-11 | 12 |
renal cortical epithelial cell | 5.54e-11 | 12 |
leptomeningeal cell | 1.39e-09 | 3 |
capillary endothelial cell | 7.45e-09 | 3 |
lining cell | 1.40e-08 | 58 |
barrier cell | 1.40e-08 | 58 |
lymphangioblast | 1.06e-07 | 6 |
endothelial cell of lymphatic vessel | 1.06e-07 | 6 |
vascular lymphangioblast | 1.06e-07 | 6 |
pericyte cell | 2.55e-07 | 4 |
endothelial cell | 2.77e-07 | 36 |
endothelial cell of sinusoid | 3.49e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.49e-07 | 2 |
fibroblast of lymphatic vessel | 5.96e-07 | 2 |
hepatic stem cell | 6.90e-07 | 2 |
hepatic mesenchymal stem cell | 6.90e-07 | 2 |
glomerular cell | 9.59e-07 | 7 |
kidney corpuscule cell | 9.59e-07 | 7 |