FFCP PHASE1:Hg19::chr12:6485371..6485382,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6485371..6485382,- to FFCP PHASE1:Hg19::chr12:6485371..6485382,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_ENST00000536411_5end | |||
|cluster_id=chr12:6485371..6485382,- | |||
|coexpression_cluster_id=C2229 | |||
|description=CAGE_peak_11_at_SCNN1A_5end | |||
|id=chr12:6485371..6485382,- | |||
|ontology_enrichment_celltype=CL:0000066!1.61e-23!254;CL:0000223!3.54e-18!59;CL:0002076!5.80e-18!43;CL:0002368!8.33e-12!13;CL:0002202!3.38e-08!9;CL:0002632!3.38e-08!9;CL:1000449!4.32e-07!16;CL:1000507!7.80e-07!12;CL:1000494!7.80e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.86e-17;3!CL:0000349;2.15e-13;19!CL:0002536;1.77e-12;2!CL:0002076;3.41e-09;42!CL:1000449;1.12e-08;15!CL:1000507;1.33e-08;10!CL:1000494;1.33e-08;10!CL:0002623;1.92e-08;3!CL:0000239;4.31e-08;3!CL:1000615;4.31e-08;3!CL:0002306;4.31e-08;3!CL:0002231;7.71e-08;3!CL:1000497;1.26e-07;17!CL:0002518;1.26e-07;17!CL:0002681;2.66e-07;12!CL:0002584;2.66e-07;12!CL:0002368;9.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.31e-17,3;CL:0000349,1.72e-13,19;CL:0002076,3.67e-13,42;CL:0002536,1.83e-12,2;CL:0000066,1.28e-09,253;CL:0000223,5.86e-09,58;CL:1000449,1.05e-08,15;CL:1000507,1.34e-08,10;CL:1000494,1.34e-08,10;CL:0002623,2.22e-08,3;CL:0000239,3.08e-08,3;CL:1000615,3.08e-08,3;CL:0002306,3.08e-08,3;CL:1000497,1.19e-07,17;CL:0002518,1.19e-07,17;CL:0002231,1.21e-07,3;CL:0002681,2.53e-07,12;CL:0002584,2.53e-07,12;CL:0002368,9.34e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.98e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.79e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.08e-15!104;UBERON:0000466!1.89e-15!126;UBERON:0004119!6.58e-14!169;UBERON:0000925!6.58e-14!169;UBERON:0006595!6.58e-14!169;UBERON:0005177!3.48e-13!107;UBERON:0006554!5.51e-13!44;UBERON:0001008!1.67e-12!45;UBERON:0000077!8.74e-11!130;UBERON:0001004!1.76e-10!72;UBERON:0002553!1.13e-09!70;UBERON:0005153!1.23e-09!37;UBERON:0000058!1.67e-09!26;UBERON:0004921!3.56e-09!129;UBERON:0004185!3.56e-09!129;UBERON:0009569!4.56e-09!113;UBERON:0002113!5.58e-09!27;UBERON:0003918!5.58e-09!27;UBERON:0005095!5.58e-09!27;UBERON:0007687!5.58e-09!27;UBERON:0000080!6.94e-09!18;UBERON:0002120!6.94e-09!18;UBERON:0004875!6.94e-09!18;UBERON:0005721!6.94e-09!18;UBERON:0005754!6.94e-09!18;UBERON:0007297!6.94e-09!18;UBERON:0001007!9.53e-09!155;UBERON:0001555!9.53e-09!155;UBERON:0007026!9.53e-09!155;UBERON:0005911!1.00e-08!82;UBERON:0000489!1.17e-08!32;UBERON:0000481!1.20e-08!347;UBERON:0000065!1.97e-08!53;UBERON:0001041!4.07e-08!98;UBERON:0003064!4.07e-08!37;UBERON:0003101!4.11e-08!22;UBERON:0000079!4.11e-08!22;UBERON:0005631!6.30e-08!14;UBERON:0000158!6.30e-08!14;UBERON:0006555!7.27e-08!17;UBERON:0005103!7.27e-08!17;UBERON:0000083!7.27e-08!17;UBERON:0009201!7.27e-08!17;UBERON:0004819!7.27e-08!17;UBERON:0006553!7.27e-08!17;UBERON:0003074!7.27e-08!17;UBERON:0003060!7.27e-08!17;UBERON:0004876!1.27e-07!20;UBERON:0003135!1.32e-07!11;UBERON:0003104!2.20e-07!238;UBERON:0009142!2.20e-07!238;UBERON:0008947!2.91e-07!38;UBERON:0003258!2.91e-07!38;UBERON:0004211!4.32e-07!16;UBERON:0001285!4.32e-07!16;UBERON:0007684!4.32e-07!16;UBERON:0003220!4.32e-07!16;UBERON:0004208!4.32e-07!16;UBERON:0003887!4.35e-07!21;UBERON:0005178!4.89e-07!34;UBERON:0002224!4.89e-07!34;UBERON:0001048!5.38e-07!168;UBERON:0005172!5.81e-07!55;UBERON:0005173!5.81e-07!55;UBERON:0000922!7.22e-07!612;UBERON:0009773!7.80e-07!12;UBERON:0001231!7.80e-07!12;UBERON:0004810!7.80e-07!12;UBERON:0003124!7.80e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.41e-13;4!UBERON:0000478;2.09e-10;24!UBERON:0006555;1.12e-08;15!UBERON:0004819;1.12e-08;15!UBERON:0001285;1.12e-08;15!UBERON:0007684;1.12e-08;15!UBERON:0004211;1.33e-08;10!UBERON:0009773;1.33e-08;10!UBERON:0001231;1.33e-08;10!UBERON:0004810;1.33e-08;10!UBERON:0006853;4.31e-08;3!UBERON:0007685;4.31e-08;3!UBERON:0004134;4.31e-08;3!UBERON:0006947;4.31e-08;3!UBERON:0004054;4.31e-08;3!UBERON:0006554;8.09e-08;30!UBERON:0001008;8.09e-08;30!UBERON:0002113;1.76e-07;24!UBERON:0011143;1.76e-07;24!UBERON:0001225;2.66e-07;12!UBERON:0008987;2.66e-07;12!UBERON:0000998;6.98e-07;1!UBERON:0006868;6.98e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.44e-16,47;UBERON:0001008,3.63e-16,48;UBERON:0005631,6.30e-14,14;UBERON:0000158,6.30e-14,14;UBERON:0001987,3.76e-13,4;UBERON:0004340,3.76e-13,4;UBERON:0003124,5.75e-13,7;UBERON:0000478,1.76e-10,24;UBERON:0004175,9.34e-10,25;UBERON:0002113,2.64e-09,26;UBERON:0003918,2.64e-09,26;UBERON:0011143,2.64e-09,26;UBERON:0005095,2.64e-09,26;UBERON:0007687,2.64e-09,26;UBERON:0004211,1.05e-08,15;UBERON:0009773,1.05e-08,15;UBERON:0001231,1.05e-08,15;UBERON:0001285,1.05e-08,15;UBERON:0007684,1.05e-08,15;UBERON:0004208,1.05e-08,15;UBERON:0004810,1.34e-08,10;UBERON:0006853,3.08e-08,3;UBERON:0007685,3.08e-08,3;UBERON:0004134,3.08e-08,3;UBERON:0006555,3.82e-08,16;UBERON:0004819,3.82e-08,16;UBERON:0006947,4.89e-08,3;UBERON:0004054,4.89e-08,3;UBERON:0005153,7.68e-08,37;UBERON:0004119,1.04e-07,160;UBERON:0000925,1.04e-07,160;UBERON:0006595,1.04e-07,160;UBERON:0000489,1.18e-07,31;UBERON:0001225,2.53e-07,12;UBERON:0008987,2.53e-07,12;UBERON:0005177,2.62e-07,101;UBERON:0000998,6.43e-07,1;UBERON:0006868,6.43e-07,1 | |||
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| ||
|short_description=p11@SCNN1A | |||
}} | }} |
Latest revision as of 20:59, 19 September 2015
Short description: | p11@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SCNN1A_5end |
Coexpression cluster: | C2229_Amniotic_Placental_lung_thyroid_kidney_Small_testicular |
Association with transcript: | -177bp_to_ENST00000536411_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.31e-17 | 3 |
extraembryonic cell | 1.72e-13 | 19 |
endo-epithelial cell | 3.67e-13 | 42 |
amniotic epithelial cell | 1.83e-12 | 2 |
epithelial cell | 1.28e-09 | 253 |
endodermal cell | 5.86e-09 | 58 |
epithelial cell of nephron | 1.05e-08 | 15 |
kidney tubule cell | 1.34e-08 | 10 |
nephron tubule epithelial cell | 1.34e-08 | 10 |
acinar cell of salivary gland | 2.22e-08 | 3 |
brush border epithelial cell | 3.08e-08 | 3 |
kidney cortex tubule cell | 3.08e-08 | 3 |
epithelial cell of proximal tubule | 3.08e-08 | 3 |
kidney cell | 1.19e-07 | 17 |
kidney epithelial cell | 1.19e-07 | 17 |
epithelial cell of prostate | 1.21e-07 | 3 |
kidney cortical cell | 2.53e-07 | 12 |
renal cortical epithelial cell | 2.53e-07 | 12 |
respiratory epithelial cell | 9.34e-07 | 13 |