FFCP PHASE1:Hg19::chr12:56881909..56881935,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:56881909..56881935,- to FFCP PHASE1:Hg19::chr12:56881909..56881935,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27165 | |EntrezGene=27165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |HGNC=29570 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0A6,C9J3Q2,F8WBL8 | |UniProt=A8K0A6,C9J3Q2,F8WBL8 | ||
|association_with_transcript=0bp_to_ENST00000424141,ENST00000461077,ENST00000479952_5end | |||
|cluster_id=chr12:56881909..56881935,- | |||
|coexpression_cluster_id=C1364 | |||
|description=CAGE_peak_3_at_GLS2_5end | |||
|id=chr12:56881909..56881935,- | |||
|ontology_enrichment_celltype=CL:0000223!6.90e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.93e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.69e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.40e-11;82 | |||
|ontology_enrichment_disease=DOID:305!2.67e-10!106;DOID:0050687!5.47e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.12e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.20e-31!82;UBERON:0001049!1.14e-30!57;UBERON:0005068!1.14e-30!57;UBERON:0006241!1.14e-30!57;UBERON:0007135!1.14e-30!57;UBERON:0005743!1.51e-30!86;UBERON:0007023!9.33e-28!115;UBERON:0000073!1.22e-27!94;UBERON:0001016!1.22e-27!94;UBERON:0000955!3.80e-26!69;UBERON:0006238!3.80e-26!69;UBERON:0002780!7.28e-26!41;UBERON:0001890!7.28e-26!41;UBERON:0006240!7.28e-26!41;UBERON:0003080!7.43e-25!42;UBERON:0002616!9.37e-25!59;UBERON:0003075!1.30e-22!86;UBERON:0007284!1.30e-22!86;UBERON:0002020!1.11e-21!34;UBERON:0003528!1.11e-21!34;UBERON:0002346!3.21e-21!90;UBERON:0001893!3.66e-21!34;UBERON:0001869!6.55e-21!32;UBERON:0002791!2.33e-20!33;UBERON:0004121!2.71e-20!169;UBERON:0000153!3.26e-20!129;UBERON:0007811!3.26e-20!129;UBERON:0000033!3.70e-20!123;UBERON:0000924!1.49e-19!173;UBERON:0006601!1.49e-19!173;UBERON:0003056!2.44e-19!61;UBERON:0002619!5.16e-19!22;UBERON:0001950!1.58e-17!20;UBERON:0000956!1.24e-15!25;UBERON:0000203!1.24e-15!25;UBERON:0000475!8.83e-10!365;UBERON:0004111!1.56e-08!241;UBERON:0001871!1.31e-07!7;UBERON:0002308!1.51e-07!9;UBERON:0000125!1.51e-07!9;UBERON:0002420!1.55e-07!9;UBERON:0007245!1.55e-07!9;UBERON:0010009!1.55e-07!9;UBERON:0010011!1.55e-07!9;UBERON:0000454!1.55e-07!9;UBERON:0000481!2.29e-07!347;UBERON:0000025!2.30e-07!194;UBERON:0004921!3.06e-07!129;UBERON:0004185!3.06e-07!129;UBERON:0003076!4.31e-07!15;UBERON:0003057!4.31e-07!15;UBERON:0002530!4.68e-07!59;UBERON:0000062!8.43e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.34e-29;32!UBERON:0002619;8.90e-29;22!UBERON:0003528;6.08e-28;34!UBERON:0002020;6.08e-28;34!UBERON:0002780;3.77e-27;41!UBERON:0001890;3.77e-27;41!UBERON:0002791;6.27e-27;32!UBERON:0001893;2.87e-26;34!UBERON:0001950;3.97e-26;20!UBERON:0000073;7.47e-25;53!UBERON:0002616;7.47e-25;53!UBERON:0000956;1.20e-24;25!UBERON:0000203;1.20e-24;25!UBERON:0000955;4.32e-20;68!UBERON:0001017;1.87e-18;75!UBERON:0001016;8.40e-14;83!UBERON:0001871;5.56e-11;6!UBERON:0000200;6.69e-11;6!UBERON:0004733;7.05e-10;12!UBERON:0002028;7.05e-10;12!UBERON:0001894;7.22e-10;7!UBERON:0002298;3.31e-09;6!UBERON:0004732;5.83e-09;13!UBERON:0000125;6.92e-09;9!UBERON:0002308;6.92e-09;9!UBERON:0002420;7.68e-09;9!UBERON:0007245;7.68e-09;9!UBERON:0010009;7.68e-09;9!UBERON:0010011;7.68e-09;9!UBERON:0000454;7.68e-09;9!UBERON:0000349;1.71e-08;5!UBERON:0000369;8.13e-08;4!UBERON:0002435;8.13e-08;4!UBERON:0000204;8.13e-08;4!UBERON:0007023;9.40e-08;114!UBERON:0011216;1.04e-07;132!UBERON:0002365;7.81e-07;31!UBERON:0002330;7.81e-07;31!UBERON:0002680;9.48e-07;9!UBERON:0001895;9.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.24e-48,56;UBERON:0005068,4.24e-48,56;UBERON:0006241,4.24e-48,56;UBERON:0007135,4.24e-48,56;UBERON:0000073,5.35e-47,53;UBERON:0002616,5.35e-47,53;UBERON:0001017,1.34e-44,81;UBERON:0000955,6.07e-41,68;UBERON:0006238,6.07e-41,68;UBERON:0001016,1.61e-38,89;UBERON:0002780,4.32e-38,41;UBERON:0001890,4.32e-38,41;UBERON:0003080,4.32e-38,41;UBERON:0006240,4.32e-38,41;UBERON:0003075,5.00e-33,82;UBERON:0007284,5.00e-33,82;UBERON:0003528,3.45e-32,34;UBERON:0002020,3.45e-32,34;UBERON:0001869,4.16e-32,32;UBERON:0002346,8.40e-31,86;UBERON:0001893,9.59e-30,34;UBERON:0002791,1.80e-29,32;UBERON:0010371,2.86e-29,104;UBERON:0002619,7.44e-29,22;UBERON:0003056,7.01e-27,61;UBERON:0001950,3.65e-26,20;UBERON:0011216,3.87e-26,223;UBERON:0000956,1.03e-24,25;UBERON:0000203,1.03e-24,25;UBERON:0007023,4.87e-22,114;UBERON:0004121,1.10e-21,171;UBERON:0000924,1.10e-21,171;UBERON:0006601,1.10e-21,171;UBERON:0010314,5.32e-17,132;UBERON:0000025,2.09e-14,192;UBERON:0004111,1.23e-11,240;UBERON:0001871,4.66e-11,6;UBERON:0003076,5.34e-11,15;UBERON:0003057,5.34e-11,15;UBERON:0000200,6.78e-11,6;UBERON:0000483,2.54e-10,306;UBERON:0000119,4.83e-10,309;UBERON:0004733,6.13e-10,12;UBERON:0002028,6.13e-10,12;UBERON:0007277,6.13e-10,12;UBERON:0001894,7.09e-10,7;UBERON:0006222,7.09e-10,7;UBERON:0002298,2.80e-09,6;UBERON:0004732,5.14e-09,13;UBERON:0000125,7.30e-09,9;UBERON:0002308,7.30e-09,9;UBERON:0002420,7.57e-09,9;UBERON:0007245,7.57e-09,9;UBERON:0010009,7.57e-09,9;UBERON:0010011,7.57e-09,9;UBERON:0000454,7.57e-09,9;UBERON:0000349,1.54e-08,5;UBERON:0000369,8.73e-08,4;UBERON:0002435,8.73e-08,4;UBERON:0000204,8.73e-08,4;UBERON:0010082,8.73e-08,4;UBERON:0002365,4.97e-07,31;UBERON:0002330,4.97e-07,31;UBERON:0002530,5.78e-07,59;UBERON:0002680,9.40e-07,9;UBERON:0001895,9.40e-07,9;UBERON:0010092,9.40e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0,0,0,0,0,0,1.84877005083394,9.29606406963619,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0.977766799900771,0.473447805734733,0,0,0,0,0,0.25618263945135,0,0,0.552700035571697,0.289803085735052,0.889719378972363,0.267540828089713,2.09071047609954,0.113309342697566,0,0,0.253019692019503,0,0,0,1.20460095262218,0.511946444617674,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.30979075497713,1.45718115317017,0.741568885568859,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02513230227665,1.59035721985782,2.78865462886844,2.69518743039963,2.52320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.939128553901,1.96565443335525,25.9947558939818,0,3.32068784066407,0,0.548751427043128,2.24803506515239,0.301586917234893,1.01847289674383,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,2.61570544662566,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0.200506470303285,1.10497186723076,0,0,0,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,35.240025983521,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,32.7620426703191,0.43050537267123,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.427296284509893,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79560539918633,0.146508179271894,1.33496573924465,0,0,0,0,0,4.97073823883149,4.22008249231538,0,0,5.91151142758382,0,0,6.2983186963569,0.715880777515084,0.369254416383208,0,0.359473404589307,0,0,0.295930216910801,0,0,4.84666373047609,5.38054969338737,5.98841394003583,0.520855522170466,1.92411999991631,0,5.80346586256048,1.27126825146383,0,2.06846023944879,0,0.173624994933292,8.85741385813839,7.95936494927692,4.5774520895125,11.831980812641,9.75307142546707,8.11725969469698,0,2.92789862985067,0.384751292518985,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,3.95788600015034,0.432777279484182,0,0,0,0,0,0,0.337005664903385,0,3.74823113160543,0,1.9566461893209,0,0,1.20990716048664,1.83643656978294,0.063186579628488,4.81034942126376,1.34794648816421,0,0,0,0,0,0,3.64475450503775,0.0979923974143777,2.08942095792966,0.873633341210151,0.171986032471617,0,0,0,0.678923115418936,0.970817393606503,0.451961481561065,0,0,6.26776879963199,0.586654148204409,0.400794101257669,0.213452994739353,0.39961921916426,4.8990741832396,0.458146384663663,0.343189995723929,0,0.124252535565433,0.942776138467182,0,0,0,0,3.60252173225874,0.821432273351958,0,0,0,0,0,0,0.998395002494955,0.429226048136571,0,0.0671834724867263,0,3.49487848582361,3.46646002151784,3.37905019362782,1.95470277177136,0.295282444544246,0,3.97614844904652,4.35850899557042,2.57205037544031,7.97728732263956,4.15440338029185,0.674921674654501,2.32140586367385,5.77120788251234,0.335434687599266,0.315222829196793,0.472091293214983,0,0,3.07064315711112,0,0,0.5085370753095,0,0,0,0,0,0,0,44.2587745707809,84.8044089038216,6.20558190535443,3.57028024705263,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0,0.197611631897944,3.16660755790329,0,0,0,0,0,0.314108192500469,6.2024772597689,6.9554970994119,6.00916467391199,1.72022758707021,2.21858103073705,2.91853093824502,0.691743174681154,0.74988244777264,0,0,0,0.468334905806882,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.926404341482917,0.219284049578707,0.176689145945881,0.578742114812744,0,0,0,0,9.26331522216596,0,0.930053882193542,0.327130788511688,0.327609848846413,0,0,0.19998739585493,0,0,0,0,1.67855409263333,0,0,0.215649622793364,0.786329709279482,0,0,0,0.123935764259002,0,0,0.157723490002507,4.80342448971282,0,0,6.03754715906719,8.5017945795351,7.34315751662896,8.61488729811171,0.504143392443436,10.5810596270253,8.07378228159256,0,0.588886311006154,4.12894031717091,0,0.346576998451015,0,0.690359926060101,0,0.225630985047772,0,20.3193642920604,0,0,0.887136517302272,5.87576986180033,4.68646859168308,7.02735108104026,6.65866007036022,0.546974809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| ||
|short_description=p3@GLS2 | |||
}} | }} |
Latest revision as of 11:08, 19 September 2015
Short description: | p3@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLS2_5end |
Coexpression cluster: | C1364_Hepatocyte_liver_occipital_cerebellum_somatostatinoma_small_pancreas |
Association with transcript: | 0bp_to_ENST00000424141, ENST00000461077, ENST00000479952_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | A8K0A6C9J3Q2F8WBL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.12e-07 | 106 |