FFCP PHASE1:Hg19::chr11:61583772..61583837,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61583772..61583837,+ to FFCP PHASE1:Hg19::chr11:61583772..61583837,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9415 | |EntrezGene=9415 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3575 | |HGNC=3575 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZU2 | |UniProt=F5GZU2 | ||
|association_with_transcript=-37bp_to_ENST00000522639_5end | |||
|cluster_id=chr11:61583772..61583837,+ | |||
|description=CAGE_peak_2_at_FADS2_5end | |||
|id=chr11:61583772..61583837,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.21e-29!248;CL:0000220!2.69e-28!246;CL:0000055!1.24e-22!180;CL:0000066!6.58e-21!254;CL:0000222!1.12e-17!119;CL:0000548!1.92e-16!679;CL:0000004!1.92e-16!679;CL:0000255!1.92e-16!679;CL:0000012!4.80e-16!682;CL:0000133!7.60e-12!59;CL:0000144!2.34e-11!625;CL:0000183!1.71e-10!59;CL:0000221!2.44e-10!71;CL:1000497!2.77e-10!18;CL:0002518!2.77e-10!18;CL:0000393!3.23e-10!60;CL:0000211!3.23e-10!60;CL:1000449!1.02e-09!16;CL:0000333!1.23e-09!41;CL:0000213!1.45e-09!57;CL:0000215!1.45e-09!57;CL:0002078!1.57e-09!44;CL:0000115!2.31e-09!35;CL:0002371!3.47e-08!591;CL:0000187!3.96e-08!54;CL:0000680!4.42e-08!57;CL:0000056!4.42e-08!57;CL:0000355!4.42e-08!57;CL:0002681!5.41e-08!13;CL:0002584!5.41e-08!13;CL:0002139!7.28e-08!24;CL:0000147!1.50e-07!14;CL:0000003!1.74e-07!722;CL:1000507!1.85e-07!12;CL:1000494!1.85e-07!12;CL:0000057!3.54e-07!75;CL:0000075!3.94e-07!27;CL:0002319!7.71e-07!25;CL:0000071!9.70e-07!18;CL:0002546!9.70e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.77e-10;17!CL:0002518;2.77e-10;17!CL:1000449;1.10e-09;15!CL:0000115;5.60e-09;36!CL:0002139;4.09e-08;24!CL:0002681;6.56e-08;12!CL:0002584;6.56e-08;12!CL:0000147;1.18e-07;14!CL:0000075;2.43e-07;27!CL:0000071;5.68e-07;18!CL:0002078;6.87e-07;45!CL:0002319;7.31e-07;25!CL:1000507;9.68e-07;10!CL:1000494;9.68e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.63e-31,250;CL:0000066,4.40e-21,253;CL:0000222,5.78e-19,121;CL:0000133,3.99e-12,59;CL:0000393,1.20e-10,61;CL:0000211,1.20e-10,61;CL:0000221,1.77e-10,72;CL:0002078,2.07e-10,45;CL:0000213,2.19e-10,58;CL:0000215,2.19e-10,58;CL:0000115,2.75e-10,36;CL:1000497,3.06e-10,17;CL:0002518,3.06e-10,17;CL:0000333,8.48e-10,41;CL:1000449,1.13e-09,15;CL:0000187,1.67e-08,55;CL:0000680,1.87e-08,58;CL:0000056,1.87e-08,58;CL:0000355,1.87e-08,58;CL:0002139,5.43e-08,24;CL:0002681,6.53e-08,12;CL:0002584,6.53e-08,12;CL:0000147,1.13e-07,14;CL:0000057,2.25e-07,76;CL:0000075,2.54e-07,27;CL:0002319,6.02e-07,25;CL:0000071,7.61e-07,18;CL:0002546,7.61e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;5.68e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.87e-16!312;UBERON:0000483!2.32e-15!309;UBERON:0003914!3.23e-15!118;UBERON:0002100!4.93e-15!216;UBERON:0005256!1.87e-14!143;UBERON:0000481!6.08e-14!347;UBERON:0002049!9.53e-13!79;UBERON:0007798!9.53e-13!79;UBERON:0003104!1.23e-12!238;UBERON:0009142!1.23e-12!238;UBERON:0000475!2.02e-12!365;UBERON:0000490!3.79e-12!138;UBERON:0000468!1.17e-11!659;UBERON:0000477!2.65e-11!286;UBERON:0000922!5.10e-10!612;UBERON:0009569!6.98e-10!113;UBERON:0004211!1.02e-09!16;UBERON:0001285!1.02e-09!16;UBERON:0007684!1.02e-09!16;UBERON:0003220!1.02e-09!16;UBERON:0004208!1.02e-09!16;UBERON:0006555!4.30e-09!17;UBERON:0005103!4.30e-09!17;UBERON:0000083!4.30e-09!17;UBERON:0009201!4.30e-09!17;UBERON:0004819!4.30e-09!17;UBERON:0006553!4.30e-09!17;UBERON:0003074!4.30e-09!17;UBERON:0003060!4.30e-09!17;UBERON:0002417!4.54e-09!61;UBERON:0000916!4.54e-09!61;UBERON:0000080!5.42e-09!18;UBERON:0002120!5.42e-09!18;UBERON:0004875!5.42e-09!18;UBERON:0005721!5.42e-09!18;UBERON:0005754!5.42e-09!18;UBERON:0007297!5.42e-09!18;UBERON:0000353!6.74e-09!17;UBERON:0002113!6.88e-09!27;UBERON:0003918!6.88e-09!27;UBERON:0005095!6.88e-09!27;UBERON:0007687!6.88e-09!27;UBERON:0002050!1.23e-08!605;UBERON:0005423!1.23e-08!605;UBERON:0001048!1.33e-08!168;UBERON:0000486!1.77e-08!82;UBERON:0000923!1.89e-08!604;UBERON:0005291!1.89e-08!604;UBERON:0006598!1.89e-08!604;UBERON:0002532!1.89e-08!604;UBERON:0004535!1.98e-08!110;UBERON:0004290!2.36e-08!70;UBERON:0000914!2.84e-08!83;UBERON:0002329!2.84e-08!83;UBERON:0003077!2.84e-08!83;UBERON:0003059!2.84e-08!83;UBERON:0007282!2.84e-08!83;UBERON:0009618!2.84e-08!83;UBERON:0007285!2.84e-08!83;UBERON:0000064!4.06e-08!219;UBERON:0004111!4.09e-08!241;UBERON:0000055!4.13e-08!69;UBERON:0006554!5.07e-08!44;UBERON:0005172!5.11e-08!55;UBERON:0005173!5.11e-08!55;UBERON:0001225!5.41e-08!13;UBERON:0008987!5.41e-08!13;UBERON:0004876!6.19e-08!20;UBERON:0004872!8.23e-08!84;UBERON:0003103!8.52e-08!69;UBERON:0000489!8.95e-08!32;UBERON:0001009!8.95e-08!113;UBERON:0001008!1.11e-07!45;UBERON:0000025!1.23e-07!194;UBERON:0005177!1.45e-07!107;UBERON:0000467!1.51e-07!625;UBERON:0009773!1.85e-07!12;UBERON:0001231!1.85e-07!12;UBERON:0004810!1.85e-07!12;UBERON:0000063!1.99e-07!97;UBERON:0000480!2.61e-07!626;UBERON:0001134!2.97e-07!61;UBERON:0002036!2.97e-07!61;UBERON:0003082!2.97e-07!61;UBERON:0001851!3.40e-07!16;UBERON:0000058!5.31e-07!26;UBERON:0000466!8.75e-07!126;UBERON:0001986!9.70e-07!18;UBERON:0004638!9.70e-07!18;UBERON:0004852!9.70e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.10e-09;15!UBERON:0004819;1.10e-09;15!UBERON:0001285;1.10e-09;15!UBERON:0007684;1.10e-09;15!UBERON:0002113;3.30e-09;24!UBERON:0011143;3.30e-09;24!UBERON:0000353;6.03e-09;15!UBERON:0006554;1.58e-08;30!UBERON:0001008;1.58e-08;30!UBERON:0001225;6.56e-08;12!UBERON:0008987;6.56e-08;12!UBERON:0000489;8.88e-08;29!UBERON:0000490;3.43e-07;33!UBERON:0001851;5.28e-07;15!UBERON:0004638;5.68e-07;18!UBERON:0001986;5.68e-07;18!UBERON:0004852;5.68e-07;18!UBERON:0003914;8.01e-07;74!UBERON:0004211;9.68e-07;10!UBERON:0009773;9.68e-07;10!UBERON:0001231;9.68e-07;10!UBERON:0004810;9.68e-07;10 | |||
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| ||
|short_description=p2@FADS2 | |||
}} | }} |
Latest revision as of 17:03, 18 September 2015
Short description: | p2@FADS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FADS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENST00000522639_5end |
EntrezGene: | FADS2 |
HGNC: | 3575 |
UniProt: | F5GZU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.63e-31 | 250 |
epithelial cell | 4.40e-21 | 253 |
mesodermal cell | 5.78e-19 | 121 |
neurectodermal cell | 3.99e-12 | 59 |
electrically responsive cell | 1.20e-10 | 61 |
electrically active cell | 1.20e-10 | 61 |
ectodermal cell | 1.77e-10 | 72 |
meso-epithelial cell | 2.07e-10 | 45 |
lining cell | 2.19e-10 | 58 |
barrier cell | 2.19e-10 | 58 |
endothelial cell | 2.75e-10 | 36 |
kidney cell | 3.06e-10 | 17 |
kidney epithelial cell | 3.06e-10 | 17 |
migratory neural crest cell | 8.48e-10 | 41 |
epithelial cell of nephron | 1.13e-09 | 15 |
muscle cell | 1.67e-08 | 55 |
muscle precursor cell | 1.87e-08 | 58 |
myoblast | 1.87e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-08 | 58 |
endothelial cell of vascular tree | 5.43e-08 | 24 |
kidney cortical cell | 6.53e-08 | 12 |
renal cortical epithelial cell | 6.53e-08 | 12 |
pigment cell | 1.13e-07 | 14 |
fibroblast | 2.25e-07 | 76 |
columnar/cuboidal epithelial cell | 2.54e-07 | 27 |
neural cell | 6.02e-07 | 25 |
blood vessel endothelial cell | 7.61e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.61e-07 | 18 |