FFCP PHASE1:Hg19::chr11:13011081..13011102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:13011081..13011102,- to FFCP PHASE1:Hg19::chr11:13011081..13011102,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100506305 | |EntrezGene=100506305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504230,ENST00000526388,ENST00000527945,ENST00000531402,ENST00000532541,ENST00000534477,NR_038904,uc001mkl.1,uc001mkm.1_5end | |||
|cluster_id=chr11:13011081..13011102,- | |||
|description=CAGE_peak_1_at_LOC100506305_5end | |||
|id=chr11:13011081..13011102,- | |||
|ontology_enrichment_celltype=CL:0000066!4.64e-17!254;CL:0002076!2.74e-12!43;CL:0000223!2.83e-11!59;CL:1000497!8.80e-09!18;CL:0002518!8.80e-09!18;CL:1000449!2.21e-07!16;CL:1000507!4.27e-07!12;CL:1000494!4.27e-07!12;CL:0002159!4.75e-07!13;CL:0002368!4.88e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;8.79e-12;17!CL:0002518;8.79e-12;17!CL:0002076;1.10e-11;42!CL:1000507;1.37e-10;10!CL:1000494;1.37e-10;10!CL:1000449;7.15e-10;15!CL:0002368;2.48e-09;13!CL:0002159;2.13e-07;14!CL:0002681;2.60e-07;12!CL:0002584;2.60e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.86e-25,253;CL:0002076,1.41e-15,42;CL:0000223,7.52e-15,58;CL:1000497,1.01e-11,17;CL:0002518,1.01e-11,17;CL:1000507,1.38e-10,10;CL:1000494,1.38e-10,10;CL:1000449,8.12e-10,15;CL:0002368,2.49e-09,13;CL:0002159,2.16e-07,14;CL:0002681,2.92e-07,12;CL:0002584,2.92e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000223;5.77e-09;58 | |||
|ontology_enrichment_disease=DOID:0050687!3.70e-12!143;DOID:305!1.98e-11!106;DOID:162!1.75e-08!235;DOID:14566!1.08e-07!239;DOID:1749!8.36e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.20e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.64e-14,106;DOID:0050687,1.22e-12,143;DOID:1749,3.22e-09,14;DOID:162,2.09e-07,235;DOID:14566,7.53e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000064!4.73e-15!219;UBERON:0000153!8.92e-14!129;UBERON:0007811!8.92e-14!129;UBERON:0000033!2.99e-13!123;UBERON:0001444!8.41e-13!48;UBERON:0000062!3.44e-12!511;UBERON:0000924!8.49e-12!173;UBERON:0006601!8.49e-12!173;UBERON:0004121!2.85e-11!169;UBERON:0001004!3.40e-11!72;UBERON:0004119!6.41e-10!169;UBERON:0000925!6.41e-10!169;UBERON:0006595!6.41e-10!169;UBERON:0002113!1.76e-09!27;UBERON:0003918!1.76e-09!27;UBERON:0005095!1.76e-09!27;UBERON:0007687!1.76e-09!27;UBERON:0001008!4.54e-09!45;UBERON:0006554!6.96e-09!44;UBERON:0000165!7.14e-09!28;UBERON:0000930!7.14e-09!28;UBERON:0000489!1.16e-08!32;UBERON:0000481!2.28e-08!347;UBERON:0000080!2.60e-08!18;UBERON:0002120!2.60e-08!18;UBERON:0004875!2.60e-08!18;UBERON:0005721!2.60e-08!18;UBERON:0005754!2.60e-08!18;UBERON:0007297!2.60e-08!18;UBERON:0003887!3.81e-08!21;UBERON:0001032!5.22e-08!24;UBERON:0004456!5.22e-08!24;UBERON:0000922!7.14e-08!612;UBERON:0006555!7.47e-08!17;UBERON:0005103!7.47e-08!17;UBERON:0000083!7.47e-08!17;UBERON:0009201!7.47e-08!17;UBERON:0004819!7.47e-08!17;UBERON:0006553!7.47e-08!17;UBERON:0003074!7.47e-08!17;UBERON:0003060!7.47e-08!17;UBERON:0000065!8.98e-08!53;UBERON:0004876!9.29e-08!20;UBERON:0000020!9.56e-08!23;UBERON:0001007!1.31e-07!155;UBERON:0001555!1.31e-07!155;UBERON:0007026!1.31e-07!155;UBERON:0004211!2.21e-07!16;UBERON:0001285!2.21e-07!16;UBERON:0007684!2.21e-07!16;UBERON:0003220!2.21e-07!16;UBERON:0004208!2.21e-07!16;UBERON:0002346!2.47e-07!90;UBERON:0000063!2.82e-07!97;UBERON:0003056!3.43e-07!61;UBERON:0009773!4.27e-07!12;UBERON:0001231!4.27e-07!12;UBERON:0004810!4.27e-07!12;UBERON:0002050!5.29e-07!605;UBERON:0005423!5.29e-07!605;UBERON:0000058!5.68e-07!26;UBERON:0003075!7.38e-07!86;UBERON:0007284!7.38e-07!86;UBERON:0000923!8.58e-07!604;UBERON:0005291!8.58e-07!604;UBERON:0006598!8.58e-07!604;UBERON:0002532!8.58e-07!604;UBERON:0000475!9.77e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.84e-14;30!UBERON:0001008;4.84e-14;30!UBERON:0002113;6.32e-12;24!UBERON:0011143;6.32e-12;24!UBERON:0004211;1.37e-10;10!UBERON:0009773;1.37e-10;10!UBERON:0001231;1.37e-10;10!UBERON:0004810;1.37e-10;10!UBERON:0003729;3.06e-10;13!UBERON:0006555;7.15e-10;15!UBERON:0004819;7.15e-10;15!UBERON:0001285;7.15e-10;15!UBERON:0007684;7.15e-10;15!UBERON:0000489;1.14e-09;29!UBERON:0007811;2.61e-09;52!UBERON:0000033;2.73e-09;50!UBERON:0000165;3.72e-09;28!UBERON:0001444;7.11e-09;48!UBERON:0000153;1.06e-08;54!UBERON:0001032;3.75e-08;24!UBERON:0004456;3.75e-08;24!UBERON:0010371;4.50e-08;31!UBERON:0001737;7.42e-08;9!UBERON:0001557;7.42e-08;9!UBERON:0000020;8.30e-08;23!UBERON:0001828;2.21e-07;8!UBERON:0001225;2.60e-07;12!UBERON:0008987;2.60e-07;12!UBERON:0001851;9.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.83e-16,62;UBERON:0007811,2.83e-16,62;UBERON:0000033,1.52e-15,56;UBERON:0001444,3.89e-13,49;UBERON:0002113,4.20e-13,26;UBERON:0003918,4.20e-13,26;UBERON:0011143,4.20e-13,26;UBERON:0005095,4.20e-13,26;UBERON:0007687,4.20e-13,26;UBERON:0001004,3.58e-12,74;UBERON:0004119,3.37e-11,160;UBERON:0000925,3.37e-11,160;UBERON:0006595,3.37e-11,160;UBERON:0006554,5.58e-11,47;UBERON:0000489,9.29e-11,31;UBERON:0004810,1.38e-10,10;UBERON:0001008,1.47e-10,48;UBERON:0006555,1.89e-10,16;UBERON:0004819,1.89e-10,16;UBERON:0003729,3.35e-10,13;UBERON:0004211,8.12e-10,15;UBERON:0009773,8.12e-10,15;UBERON:0001231,8.12e-10,15;UBERON:0001285,8.12e-10,15;UBERON:0007684,8.12e-10,15;UBERON:0004208,8.12e-10,15;UBERON:0000065,4.53e-09,54;UBERON:0000165,1.47e-08,29;UBERON:0000930,1.47e-08,29;UBERON:0000020,3.20e-08,24;UBERON:0001032,3.20e-08,24;UBERON:0004456,3.20e-08,24;UBERON:0001007,3.74e-08,145;UBERON:0001555,3.74e-08,145;UBERON:0007026,3.74e-08,145;UBERON:0001557,4.36e-08,19;UBERON:0001737,7.24e-08,9;UBERON:0000072,1.31e-07,47;UBERON:0005177,2.07e-07,101;UBERON:0005172,2.41e-07,54;UBERON:0005173,2.41e-07,54;UBERON:0001828,2.43e-07,8;UBERON:0001225,2.92e-07,12;UBERON:0008987,2.92e-07,12;UBERON:0008814,5.37e-07,18;UBERON:0001851,9.96e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.408001382488506,0.940364164434263,1.43117993565528,1.91624195102038,1.50651167513763,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,46.8904824484253,53.3134476237503,27.3617967523423,0.232401601740905,0,0,0,0.200544447470142,0,0,0,0,0.726991193897824,0,0,2.32429036905685,0.411167888021826,0,2.01384674625505,0,0,6.89491361473237,0,0,0.564727018627814,0,0,2.75475503133812,0,0,0.329851300186716,0,0,1.16083695451434,0,0,2.26123798731069,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,5.95569348133627,18.4035399893928,13.965730925207,10.8057737285613,87.4308691902101,126.066710546706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,28.7822074414073,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.454072282934794,0,0,0,0.570471821544449,0,0,0,0.421352420106746,5.30800845262722,2.08818339430006,7.33613046347935,14.2560342873846,3.4617370098998,0,0,0.168336113954066,1.00094815897571,8.03485934904131,5.26773145057006,3.98434134538726,2.25357088359895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.9832525537915,155.738034857367,92.6378843106482,0.243947412259191,0.132529768321485,0.69716365721711,3.00617059544574,0,0,0,0.643240938192885,1.38134921352481,0,0,19.5206220065742,16.3527149375759,18.5578493010281,17.8676235826478,16.9945966392077,18.5071082906655,16.1797569792197,13.7355025587742,13.4661504931237,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,25.9067393550774,114.798798537422,75.3091746826051,51.9734787368131,54.719771088691,0,0,2.88662684050547,3.36198174427723,10.4493737869881,0,0,0,0,0,0,0,0.148631162288728,89.9844806273059,51.402531228851,69.4697976487694,0,0.871901815541886,0.766765358330422,0,0,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,2.51274398001523,0,6.74106321552464,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.872931723673,12.0626095506024,0,0,0.131124414959424,39.7055659358522,66.4642359211099,43.9235870739039,29.2278449306521,101.435115366054,1.13733384070897,0.170093705276516,29.364564589891,3.08454505380579,42.5385906943849,43.6470103253722,69.5812225412955,39.8916484285788,90.8931504172044,0,0,0.769350375349168,2.29610251989794,2.60302715731442,1.33953315142039,0,0,76.3773165534909,137.162711913706,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,106.608770407831,77.4525971481378,56.149593497617,61.2004574176077,0,0,0,0,0,0,0,0,0,3.16379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0.699869440489966,118.930531328733,45.5805547364335,60.9789515223407,2.44773882019626,4.73555909938353,30.3248656201726,10.1988935313435,13.0942338117967,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,10.0253790836027,0,0.481764225311099,13.1169809674181,2.12923118845163,0.687010689511529,0,0,0,1.75849285861836,0.556812347790485,0,0,0,0,0,0,115.535216705537,18.3881584057839,0,0.47748896947538,0,0,0,0.562677665642051,49.5323737351931,0,0,1.19548792950642,0,0,0,0,0,0,0,0,1.38100767891707,0,0,0,2.41197055220813,0,0,0,2.17499872630438,126.652107941761,27.205140581326,0.236387681767936,58.2616300778075,0,14.7581245693298,1.77148277162768,0.844175070377856,0,0.331737779793674,0.295547618953547,1.09692698576986,85.5166938624073,0,5.1556673197544,3.19037756371603,64.0967654198807,52.6877372685362,32.5942115766024,1.91400695839152,2.28993983504656,4.79731298416771,0,0,0.166211681900156,96.7805384047705,97.0509544872811,99.5182010766747,230.550785259885,0.476809736941136,48.5295548414462,0,0,0.216388639742091,0,0,0,0,0,0,0.606610196826093,0,0.468528891450678,0,58.1123918228306,0,6.31335044559025,0,0,0.063186579628488,14.8820185220348,12.1315183934779,0,0,0.313932918407225,0,27.6071259648899,109.691666353393,68.2089771657064,65.4589214728043,76.6121017907543,11.1825067674899,0,25.8339404541857,28.8702802490433,24.2240598306967,20.2707044460797,0,2.48578814858586,0.548167698587004,1.9871461170299,0.886351143382302,0,39.197663103,0,41.360589183501,0,0,38.4372795210801,0,0,87.6781808774479,0,0.104602846312333,0.101998217636322,0,0,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0,0,9.31967596219631,6.30265458457789,6.34602109534982,7.95361817479382,0,0.169346664131569,0,0.681017030557878,0.321506296930038,0,0.415440338029185,1.1248694577575,5.41661368190565,1.27574068981852,6.37325906438606,21.6715695072795,21.4539265472142,0,0,98.0686658302365,0,0,0,0,0,0,15.5649249031234,1.06720276974141,0,0,0,0,0.258565912723101,2.38018683136842,0,0,0.320362237703084,0,0.828478110694391,0,92.8774669920338,0,151.925219349303,0,0,0,0,111.351354241416,0.88606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| ||
|short_description=p1@LOC100506305 | |||
}} | }} |
Latest revision as of 18:23, 16 September 2015
Short description: | p1@LOC100506305 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100506305_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504230, ENST00000526388, ENST00000527945, ENST00000531402, ENST00000532541, ENST00000534477, NR_038904, uc001mkl.1, uc001mkm.1_5end |
EntrezGene: | LOC100506305 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.86e-25 | 253 |
endo-epithelial cell | 1.41e-15 | 42 |
endodermal cell | 7.52e-15 | 58 |
kidney cell | 1.01e-11 | 17 |
kidney epithelial cell | 1.01e-11 | 17 |
kidney tubule cell | 1.38e-10 | 10 |
nephron tubule epithelial cell | 1.38e-10 | 10 |
epithelial cell of nephron | 8.12e-10 | 15 |
respiratory epithelial cell | 2.49e-09 | 13 |
general ecto-epithelial cell | 2.16e-07 | 14 |
kidney cortical cell | 2.92e-07 | 12 |
renal cortical epithelial cell | 2.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.64e-14 | 106 |
cell type cancer | 1.22e-12 | 143 |
squamous cell carcinoma | 3.22e-09 | 14 |
cancer | 2.09e-07 | 235 |
disease of cellular proliferation | 7.53e-07 | 239 |