FFCP PHASE1:Hg19::chr10:4720273..4720297,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:4720273..4720297,- to FFCP PHASE1:Hg19::chr10:4720273..4720297,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100216001 | |EntrezGene=100216001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_NR_024475,uc001ihe.3,uc001ihf.3_5end | |||
|cluster_id=chr10:4720273..4720297,- | |||
|coexpression_cluster_id=C1584 | |||
|description=CAGE_peak_1_at_LOC100216001_5end | |||
|id=chr10:4720273..4720297,- | |||
|ontology_enrichment_celltype=CL:0002139!9.56e-31!24;CL:0000071!1.54e-25!18;CL:0002546!1.54e-25!18;CL:0000115!5.12e-25!35;CL:0000066!1.54e-23!254;CL:0002078!1.81e-21!44;CL:0000076!9.96e-17!62;CL:0000213!1.36e-15!57;CL:0000215!1.36e-15!57;CL:1000413!1.69e-15!9;CL:0000220!4.83e-14!246;CL:0002321!9.00e-14!248;CL:0002076!4.23e-11!43;CL:0002544!6.76e-11!6;CL:0000223!1.10e-10!59;CL:0000222!2.80e-08!119;CL:0002368!5.16e-08!13;CL:0002543!9.79e-08!6;CL:0005020!6.35e-07!6;CL:0002138!6.35e-07!6;CL:0005022!6.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.55e-59;24!CL:0000071;3.13e-55;18!CL:0000115;9.03e-52;36!CL:1000413;9.16e-41;9!CL:0002078;5.43e-31;45!CL:0002544;1.10e-27;6!CL:0000213;1.05e-22;58!CL:0000215;1.05e-22;58!CL:0002543;1.52e-19;6!CL:0002621;1.48e-15;3!CL:0002618;1.33e-14;3!CL:0002188;1.42e-14;5!CL:0000076;1.89e-12;63!CL:1000746;1.90e-10;7!CL:1000612;1.90e-10;7!CL:0002545;3.20e-10;2!CL:0002138;9.31e-08;6!CL:0002166;3.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.37e-59,24;CL:0000115,1.43e-57,36;CL:0000071,1.94e-55,18;CL:0002546,1.94e-55,18;CL:0002078,2.94e-49,45;CL:1000413,8.19e-41,9;CL:0000213,9.72e-34,58;CL:0000215,9.72e-34,58;CL:0002544,8.54e-28,6;CL:0000066,1.95e-21,253;CL:0002543,1.04e-19,6;CL:0000076,1.34e-19,63;CL:0002621,1.38e-15,3;CL:0000222,6.43e-15,121;CL:0002618,8.76e-15,3;CL:0002188,1.97e-14,5;CL:0002321,5.36e-14,250;CL:1000746,2.39e-10,7;CL:1000612,2.39e-10,7;CL:0002545,2.92e-10,2;CL:0005020,8.22e-08,6;CL:0002138,8.22e-08,6;CL:0005022,8.22e-08,6;CL:0002166,3.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.13e-55;18!CL:0005022;9.31e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.54e-25!18;UBERON:0004638!1.54e-25!18;UBERON:0004852!1.54e-25!18;UBERON:0000487!7.28e-25!22;UBERON:0006914!4.36e-21!25;UBERON:0003915!1.69e-15!9;UBERON:0004700!1.69e-15!9;UBERON:0001917!1.69e-15!9;UBERON:0000055!2.54e-14!69;UBERON:0001981!1.76e-11!60;UBERON:0007500!1.76e-11!60;UBERON:0004537!1.76e-11!60;UBERON:0006965!1.76e-11!60;UBERON:0002049!2.49e-11!79;UBERON:0007798!2.49e-11!79;UBERON:0003914!4.15e-11!118;UBERON:0004872!1.21e-09!84;UBERON:0004119!1.80e-09!169;UBERON:0000925!1.80e-09!169;UBERON:0006595!1.80e-09!169;UBERON:0004111!1.89e-09!241;UBERON:0000477!1.04e-08!286;UBERON:0000490!1.25e-08!138;UBERON:0000467!2.42e-08!625;UBERON:0000480!2.79e-08!626;UBERON:0001637!6.77e-08!42;UBERON:0003509!6.77e-08!42;UBERON:0004572!6.77e-08!42;UBERON:0000119!8.75e-08!312;UBERON:0000483!1.21e-07!309;UBERON:0004535!1.40e-07!110;UBERON:0000947!2.36e-07!21;UBERON:0010191!2.36e-07!21;UBERON:0001009!3.76e-07!113;UBERON:0005911!3.93e-07!82;UBERON:0001007!4.75e-07!155;UBERON:0001555!4.75e-07!155;UBERON:0007026!4.75e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.13e-55;18!UBERON:0001986;3.13e-55;18!UBERON:0004852;3.13e-55;18!UBERON:0000487;1.26e-50;22!UBERON:0006914;4.19e-44;25!UBERON:0003915;9.16e-41;9!UBERON:0004700;9.16e-41;9!UBERON:0001917;9.16e-41;9!UBERON:0000490;5.81e-30;33!UBERON:0001949;1.48e-15;3!UBERON:0001638;6.02e-13;9!UBERON:0003920;6.02e-13;9!UBERON:0004582;6.02e-13;9!UBERON:0000055;1.01e-11;65!UBERON:0007500;4.09e-11;56!UBERON:0001981;4.09e-11;56!UBERON:0004537;4.09e-11;56!UBERON:0000074;1.90e-10;7!UBERON:0001229;1.90e-10;7!UBERON:0005800;3.20e-10;2!UBERON:0001515;3.20e-10;2!UBERON:0002066;6.00e-09;5!UBERON:0003914;7.91e-09;74!UBERON:0004111;2.98e-08;130!UBERON:0002049;8.38e-08;75!UBERON:0007798;8.38e-08;75!UBERON:0000947;1.80e-07;21!UBERON:0010191;1.80e-07;21!UBERON:0001637;1.80e-07;42!UBERON:0003509;1.80e-07;42!UBERON:0004572;1.80e-07;42!UBERON:0000483;2.48e-07;136!UBERON:0000025;6.16e-07;93!UBERON:0003929;6.74e-07;7!UBERON:0000119;6.89e-07;139 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.94e-55,18;UBERON:0001986,1.94e-55,18;UBERON:0004852,1.94e-55,18;UBERON:0000487,8.74e-51,22;UBERON:0006914,3.05e-44,25;UBERON:0003915,8.19e-41,9;UBERON:0004700,8.19e-41,9;UBERON:0001917,8.19e-41,9;UBERON:0000055,2.91e-18,68;UBERON:0001949,1.38e-15,3;UBERON:0002049,2.21e-15,78;UBERON:0007798,2.21e-15,78;UBERON:0007500,1.60e-14,59;UBERON:0001981,1.60e-14,59;UBERON:0004537,1.60e-14,59;UBERON:0006965,1.60e-14,59;UBERON:0003914,7.53e-14,117;UBERON:0001638,4.69e-13,9;UBERON:0003920,4.69e-13,9;UBERON:0004582,4.69e-13,9;UBERON:0004111,9.68e-13,240;UBERON:0000058,1.88e-10,19;UBERON:0010532,2.39e-10,7;UBERON:0000074,2.39e-10,7;UBERON:0001229,2.39e-10,7;UBERON:0001230,2.39e-10,7;UBERON:0003220,2.39e-10,7;UBERON:0005749,2.39e-10,7;UBERON:0004199,2.39e-10,7;UBERON:0004209,2.39e-10,7;UBERON:0004198,2.39e-10,7;UBERON:0005800,2.92e-10,2;UBERON:0001515,2.92e-10,2;UBERON:0004535,7.60e-10,109;UBERON:0001009,1.78e-09,112;UBERON:0004872,2.27e-09,83;UBERON:0005103,4.56e-09,8;UBERON:0000083,4.56e-09,8;UBERON:0009201,4.56e-09,8;UBERON:0006553,4.56e-09,8;UBERON:0003074,4.56e-09,8;UBERON:0003060,4.56e-09,8;UBERON:0002066,4.69e-09,5;UBERON:0000025,3.75e-08,192;UBERON:0000080,4.53e-08,9;UBERON:0002120,4.53e-08,9;UBERON:0004875,4.53e-08,9;UBERON:0005721,4.53e-08,9;UBERON:0005754,4.53e-08,9;UBERON:0007297,4.53e-08,9;UBERON:0000490,5.43e-08,148;UBERON:0000483,1.24e-07,306;UBERON:0000947,1.68e-07,21;UBERON:0010191,1.68e-07,21;UBERON:0000119,1.70e-07,309;UBERON:0001637,1.71e-07,42;UBERON:0003509,1.71e-07,42;UBERON:0004572,1.71e-07,42 | |||
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| ||
|short_description=p1@LOC100216001 | |||
}} | }} |
Latest revision as of 07:58, 18 September 2015
Short description: | p1@LOC100216001 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100216001_5end |
Coexpression cluster: | C1584_Endothelial_prostate_Gingival_Prostate_lens_Urothelial_Mallassezderived |
Association with transcript: | -11bp_to_NR_024475, uc001ihe.3, uc001ihf.3_5end |
EntrezGene: | LOC100216001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.37e-59 | 24 |
endothelial cell | 1.43e-57 | 36 |
blood vessel endothelial cell | 1.94e-55 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.94e-55 | 18 |
meso-epithelial cell | 2.94e-49 | 45 |
endothelial cell of artery | 8.19e-41 | 9 |
lining cell | 9.72e-34 | 58 |
barrier cell | 9.72e-34 | 58 |
aortic endothelial cell | 8.54e-28 | 6 |
epithelial cell | 1.95e-21 | 253 |
vein endothelial cell | 1.04e-19 | 6 |
squamous epithelial cell | 1.34e-19 | 63 |
gingival epithelial cell | 1.38e-15 | 3 |
mesodermal cell | 6.43e-15 | 121 |
endothelial cell of umbilical vein | 8.76e-15 | 3 |
glomerular endothelial cell | 1.97e-14 | 5 |
embryonic cell | 5.36e-14 | 250 |
glomerular cell | 2.39e-10 | 7 |
kidney corpuscule cell | 2.39e-10 | 7 |
thoracic aorta endothelial cell | 2.92e-10 | 2 |
lymphangioblast | 8.22e-08 | 6 |
endothelial cell of lymphatic vessel | 8.22e-08 | 6 |
vascular lymphangioblast | 8.22e-08 | 6 |
epithelial cell of Malassez | 3.77e-07 | 3 |