FFCP PHASE1:Hg19::chr10:26505290..26505312,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:26505290..26505312,+ to FFCP PHASE1:Hg19::chr10:26505290..26505312,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2572 | |EntrezGene=2572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |HGNC=4093 | ||
|TSSclassifier=strong | |||
|UniProt=Q05329,Q5VZ30 | |UniProt=Q05329,Q5VZ30 | ||
|association_with_transcript=54bp_to_ENST00000376261,NM_000818,NM_001134366,uc001isp.2,uc001isq.2,uc009xkr.2_5end | |||
|cluster_id=chr10:26505290..26505312,+ | |||
|coexpression_cluster_id=C3010 | |||
|description=CAGE_peak_4_at_GAD2_5end | |||
|id=chr10:26505290..26505312,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.48e-16!8;CL:0000540!1.47e-12!6;CL:0000031!1.47e-12!6;CL:0000404!1.47e-12!6;CL:0002322!2.03e-11!5;CL:0002319!5.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.09e-16;5!CL:0000047;3.72e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.09e-16,5;CL:0000047,6.55e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.92e-14;82!UBERON:0010122;4.19e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.22e-75;32!UBERON:0003528;3.27e-72;34!UBERON:0002020;3.27e-72;34!UBERON:0002791;4.12e-71;32!UBERON:0001893;1.27e-67;34!UBERON:0002619;9.73e-66;22!UBERON:0000956;1.94e-62;25!UBERON:0000203;1.94e-62;25!UBERON:0001950;1.19e-60;20!UBERON:0002780;9.70e-59;41!UBERON:0001890;9.70e-59;41!UBERON:0000073;2.01e-46;53!UBERON:0002616;2.01e-46;53!UBERON:0001017;1.94e-35;75!UBERON:0000955;7.54e-33;68!UBERON:0001016;8.53e-28;83!UBERON:0000125;4.14e-22;9!UBERON:0002308;4.14e-22;9!UBERON:0002420;4.75e-22;9!UBERON:0007245;4.75e-22;9!UBERON:0010009;4.75e-22;9!UBERON:0010011;4.75e-22;9!UBERON:0000454;4.75e-22;9!UBERON:0001871;5.74e-21;6!UBERON:0000200;2.11e-18;6!UBERON:0009663;5.11e-17;7!UBERON:0001872;6.50e-16;5!UBERON:0002021;1.33e-15;5!UBERON:0000349;1.05e-14;5!UBERON:0000369;2.60e-14;4!UBERON:0002435;2.60e-14;4!UBERON:0000204;2.60e-14;4!UBERON:0005383;2.55e-11;3!UBERON:0005382;2.55e-11;3!UBERON:0011216;3.09e-11;132!UBERON:0007023;7.29e-11;114!UBERON:0001870;3.33e-10;3!UBERON:0000922;1.65e-09;49!UBERON:0001873;4.19e-08;2!UBERON:0004733;4.97e-08;12!UBERON:0002028;4.97e-08;12!UBERON:0002298;7.87e-08;6!UBERON:0010314;1.01e-07;132!UBERON:0002702;1.53e-07;2!UBERON:0001897;2.01e-07;2!UBERON:0010225;2.01e-07;2!UBERON:0001875;2.18e-07;2!UBERON:0006514;2.18e-07;2!UBERON:0004732;2.29e-07;13!UBERON:0001894;2.31e-07;7!UBERON:0002771;3.04e-07;2!UBERON:0002148;8.52e-07;2!UBERON:0006331;8.52e-07;2!UBERON:0009662;8.52e-07;2!UBERON:0001876;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.14e-90,56;UBERON:0005068,6.14e-90,56;UBERON:0006241,6.14e-90,56;UBERON:0007135,6.14e-90,56;UBERON:0001017,1.03e-89,81;UBERON:0000073,1.47e-86,53;UBERON:0002616,1.47e-86,53;UBERON:0001869,6.72e-84,32;UBERON:0003528,9.25e-84,34;UBERON:0002020,9.25e-84,34;UBERON:0002780,4.86e-83,41;UBERON:0001890,4.86e-83,41;UBERON:0003080,4.86e-83,41;UBERON:0006240,4.86e-83,41;UBERON:0001016,1.01e-79,89;UBERON:0001893,1.30e-78,34;UBERON:0002791,2.22e-78,32;UBERON:0000955,2.86e-75,68;UBERON:0006238,2.86e-75,68;UBERON:0002619,9.60e-66,22;UBERON:0000956,1.97e-62,25;UBERON:0000203,1.97e-62,25;UBERON:0003075,3.24e-61,82;UBERON:0007284,3.24e-61,82;UBERON:0001950,1.29e-60,20;UBERON:0002346,6.93e-58,86;UBERON:0003056,2.31e-56,61;UBERON:0010371,4.79e-46,104;UBERON:0004121,5.71e-38,171;UBERON:0000924,5.71e-38,171;UBERON:0006601,5.71e-38,171;UBERON:0010314,6.18e-36,132;UBERON:0007023,3.81e-33,114;UBERON:0011216,3.66e-29,223;UBERON:0000125,3.97e-22,9;UBERON:0002308,3.97e-22,9;UBERON:0002420,5.10e-22,9;UBERON:0007245,5.10e-22,9;UBERON:0010009,5.10e-22,9;UBERON:0010011,5.10e-22,9;UBERON:0000454,5.10e-22,9;UBERON:0001871,6.39e-21,6;UBERON:0000025,6.86e-19,192;UBERON:0000200,2.28e-18,6;UBERON:0009663,5.26e-17,7;UBERON:0001872,7.84e-16,5;UBERON:0002021,1.10e-15,5;UBERON:0000349,1.02e-14,5;UBERON:0000369,2.64e-14,4;UBERON:0002435,2.64e-14,4;UBERON:0000204,2.64e-14,4;UBERON:0010082,2.64e-14,4;UBERON:0004111,4.76e-13,240;UBERON:0005383,2.55e-11,3;UBERON:0005382,2.55e-11,3;UBERON:0003076,6.05e-11,15;UBERON:0003057,6.05e-11,15;UBERON:0001870,3.27e-10,3;UBERON:0000922,1.87e-09,592;UBERON:0000483,1.87e-09,306;UBERON:0000119,2.90e-09,309;UBERON:0001873,4.19e-08,2;UBERON:0010122,4.19e-08,2;UBERON:0004733,5.32e-08,12;UBERON:0002028,5.32e-08,12;UBERON:0007277,5.32e-08,12;UBERON:0002298,8.26e-08,6;UBERON:0002702,1.61e-07,2;UBERON:0001897,2.08e-07,2;UBERON:0010225,2.08e-07,2;UBERON:0001875,2.22e-07,2;UBERON:0006514,2.22e-07,2;UBERON:0000923,2.25e-07,560;UBERON:0010316,2.25e-07,560;UBERON:0005291,2.25e-07,560;UBERON:0006598,2.25e-07,560;UBERON:0010317,2.25e-07,560;UBERON:0002532,2.25e-07,560;UBERON:0001894,2.44e-07,7;UBERON:0006222,2.44e-07,7;UBERON:0004732,2.44e-07,13;UBERON:0002771,3.14e-07,2;UBERON:0002050,3.16e-07,564;UBERON:0002148,7.90e-07,2;UBERON:0006331,7.90e-07,2;UBERON:0009662,7.90e-07,2 | |||
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| ||
|short_description=p4@GAD2 | |||
}} | }} |
Latest revision as of 17:37, 17 September 2015
Short description: | p4@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GAD2_5end |
Coexpression cluster: | C3010_caudate_putamen_argyrophil_temporal_parietal_globus_duodenum |
Association with transcript: | 54bp_to_ENST00000376261, NM_000818, NM_001134366, uc001isp.2, uc001isq.2, uc009xkr.2_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q05329Q5VZ30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.09e-16 | 5 |
neuronal stem cell | 6.55e-10 | 8 |