FFCP PHASE1:Hg19::chr10:18240899..18240911,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:18240899..18240911,+ to FFCP PHASE1:Hg19::chr10:18240899..18240911,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221074 | |EntrezGene=221074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20860 | |HGNC=20860 | ||
|TSSclassifier=strong | |||
|UniProt=F5GX72 | |UniProt=F5GX72 | ||
|association_with_transcript=7bp_to_ENST00000539911_5end | |||
|cluster_id=chr10:18240899..18240911,+ | |||
|coexpression_cluster_id=C1305 | |||
|description=CAGE_peak_3_at_SLC39A12_5end | |||
|id=chr10:18240899..18240911,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.54e-24;82!UBERON:0010122;2.89e-10;2!UBERON:0006241;6.46e-07;3!UBERON:0003057;6.46e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.33e-117!57;UBERON:0005068!5.33e-117!57;UBERON:0006241!5.33e-117!57;UBERON:0007135!5.33e-117!57;UBERON:0002616!9.77e-98!59;UBERON:0001017!1.45e-93!82;UBERON:0005743!4.96e-93!86;UBERON:0002780!1.12e-92!41;UBERON:0001890!1.12e-92!41;UBERON:0006240!1.12e-92!41;UBERON:0003080!2.56e-90!42;UBERON:0000955!6.93e-90!69;UBERON:0006238!6.93e-90!69;UBERON:0000073!6.45e-87!94;UBERON:0001016!6.45e-87!94;UBERON:0003075!2.79e-82!86;UBERON:0007284!2.79e-82!86;UBERON:0001893!1.43e-81!34;UBERON:0002020!2.71e-81!34;UBERON:0003528!2.71e-81!34;UBERON:0002791!3.25e-78!33;UBERON:0002346!3.36e-78!90;UBERON:0001869!3.09e-75!32;UBERON:0003056!5.01e-64!61;UBERON:0007023!4.65e-63!115;UBERON:0002619!5.40e-60!22;UBERON:0001950!3.42e-53!20;UBERON:0000956!1.88e-52!25;UBERON:0000203!1.88e-52!25;UBERON:0000033!7.48e-52!123;UBERON:0000153!5.39e-49!129;UBERON:0007811!5.39e-49!129;UBERON:0004121!2.97e-44!169;UBERON:0000924!5.36e-43!173;UBERON:0006601!5.36e-43!173;UBERON:0002420!1.22e-31!9;UBERON:0007245!1.22e-31!9;UBERON:0010009!1.22e-31!9;UBERON:0010011!1.22e-31!9;UBERON:0000454!1.22e-31!9;UBERON:0002308!1.20e-30!9;UBERON:0000125!1.20e-30!9;UBERON:0000025!1.68e-27!194;UBERON:0003076!3.58e-26!15;UBERON:0003057!3.58e-26!15;UBERON:0009663!1.77e-24!7;UBERON:0000200!1.22e-22!6;UBERON:0002298!2.10e-21!8;UBERON:0004111!3.87e-20!241;UBERON:0000349!6.55e-19!5;UBERON:0004733!8.26e-18!12;UBERON:0002028!8.26e-18!12;UBERON:0007277!8.26e-18!12;UBERON:0001872!1.01e-17!5;UBERON:0001871!4.35e-17!7;UBERON:0000477!2.03e-16!286;UBERON:0000483!2.26e-16!309;UBERON:0004732!2.46e-16!13;UBERON:0000119!4.11e-16!312;UBERON:0000369!6.50e-15!4;UBERON:0002435!6.50e-15!4;UBERON:0000204!6.50e-15!4;UBERON:0010082!6.50e-15!4;UBERON:0000475!5.65e-14!365;UBERON:0000064!7.62e-14!219;UBERON:0002771!1.68e-12!3;UBERON:0001896!2.10e-12!3;UBERON:0005290!2.10e-12!3;UBERON:0010096!2.10e-12!3;UBERON:0001894!2.24e-12!7;UBERON:0006222!2.24e-12!7;UBERON:0002021!6.05e-12!5;UBERON:0005383!1.06e-11!3;UBERON:0005382!1.06e-11!3;UBERON:0006331!6.09e-11!3;UBERON:0000988!6.31e-11!3;UBERON:0002240!7.25e-11!3;UBERON:0002680!3.31e-09!9;UBERON:0001895!3.31e-09!9;UBERON:0010092!3.31e-09!9;UBERON:0001876!6.81e-09!2;UBERON:0001870!1.15e-08!2;UBERON:0001954!1.61e-08!2;UBERON:0003022!1.61e-08!2;UBERON:0002421!1.61e-08!2;UBERON:0002600!1.61e-08!2;UBERON:0001873!2.42e-08!2;UBERON:0010122!2.42e-08!2;UBERON:0001875!3.01e-08!2;UBERON:0006514!3.01e-08!2;UBERON:0003296!3.32e-08!4;UBERON:0010133!3.32e-08!4;UBERON:0002148!7.10e-08!2;UBERON:0009662!7.10e-08!2;UBERON:0001905!7.36e-08!2;UBERON:0002757!7.36e-08!2;UBERON:0010134!7.36e-08!2;UBERON:0002784!7.36e-08!2;UBERON:0005408!7.36e-08!2;UBERON:0001899!7.36e-08!2;UBERON:0000062!1.99e-07!511;UBERON:0000481!2.54e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.12e-72;34!UBERON:0003528;1.49e-72;34!UBERON:0002020;1.49e-72;34!UBERON:0002791;8.40e-69;32!UBERON:0001869;1.24e-67;32!UBERON:0002780;1.20e-61;41!UBERON:0001890;1.20e-61;41!UBERON:0002619;9.60e-57;22!UBERON:0000073;8.60e-56;53!UBERON:0002616;8.60e-56;53!UBERON:0000956;9.79e-50;25!UBERON:0000203;9.79e-50;25!UBERON:0001950;1.97e-48;20!UBERON:0002420;2.11e-40;9!UBERON:0007245;2.11e-40;9!UBERON:0010009;2.11e-40;9!UBERON:0010011;2.11e-40;9!UBERON:0000454;2.11e-40;9!UBERON:0000125;2.42e-39;9!UBERON:0002308;2.42e-39;9!UBERON:0001017;1.65e-37;75!UBERON:0000955;4.64e-37;68!UBERON:0009663;4.13e-31;7!UBERON:0000200;6.76e-29;6!UBERON:0002298;4.87e-28;6!UBERON:0001016;1.38e-25;83!UBERON:0000349;5.44e-24;5!UBERON:0000369;8.52e-19;4!UBERON:0002435;8.52e-19;4!UBERON:0000204;8.52e-19;4!UBERON:0001871;1.30e-17;6!UBERON:0007023;8.37e-17;114!UBERON:0001896;9.40e-16;3!UBERON:0005290;9.40e-16;3!UBERON:0001870;1.61e-15;3!UBERON:0005383;1.09e-14;3!UBERON:0005382;1.09e-14;3!UBERON:0000988;4.38e-14;3!UBERON:0004733;9.78e-14;12!UBERON:0002028;9.78e-14;12!UBERON:0004732;1.24e-12;13!UBERON:0002702;4.21e-11;2!UBERON:0002771;4.76e-11;2!UBERON:0001876;4.76e-11;2!UBERON:0011216;1.23e-10;132!UBERON:0001954;1.35e-10;2!UBERON:0003022;1.35e-10;2!UBERON:0002421;1.35e-10;2!UBERON:0002600;1.35e-10;2!UBERON:0001873;2.89e-10;2!UBERON:0002148;5.83e-10;2!UBERON:0001875;5.83e-10;2!UBERON:0006331;5.83e-10;2!UBERON:0009662;5.83e-10;2!UBERON:0006514;5.83e-10;2!UBERON:0002021;4.09e-09;5!UBERON:0001872;5.47e-09;5!UBERON:0010314;6.67e-09;132!UBERON:0002240;6.46e-07;3!UBERON:0005174;6.46e-07;3!UBERON:0001137;6.46e-07;3 | |||
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|short_description=p3@SLC39A12 | |||
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Latest revision as of 11:46, 17 September 2015
Short description: | p3@SLC39A12 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC39A12_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | 7bp_to_ENST00000539911_5end |
EntrezGene: | SLC39A12 |
HGNC: | 20860 |
UniProt: | F5GX72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data