FF:11423-118G1: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005433 | ||
| | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005433 | ||
|accession_numbers=CAGE;DRX008340;DRR009212;DRZ000637;DRZ002022;DRZ011987;DRZ013372 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037144;DRR041510;DRZ007152 | |||
| | |||
| | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000710,CL:0000255,CL:0002077,CL:0000148,CL:0002567 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000090 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr22:38380543..38380569,-!p1@SOX10!2.70!496.11!SOX10;;chr19:3574330..3574393,+!p2@HMG20B!2.07!116.33!HMG20B;;chr2:223163706..223163730,-!p1@PAX3!1.98!94.09!PAX3;;chr6:391743..391759,+!p1@IRF4!1.90!78.69!IRF4;;chr6:10415276..10415341,-!p2@TFAP2A!1.76!68.43!TFAP2A;;chr19:3574400..3574430,+!p6@HMG20B!1.73!53.03!HMG20B;;chr3:69985734..69985749,+!p2@MITF!1.72!51.32!MITF;;chr6:10412600..10412637,-!p1@TFAP2A!1.66!73.56!TFAP2A;;chr6:10415484..10415508,-!p3@TFAP2A!1.66!44.48!TFAP2A;;chr19:3574157..3574180,+!p4@HMG20B!1.66!44.48!HMG20B;;chr1:25256756..25256774,-!p1@RUNX3!1.64!78.69!RUNX3;;chr8:72756637..72756664,-!p3@MSC!1.55!39.35!MSC;;chr2:5832508..5832524,+!p1@SOX11!1.55!34.21!SOX11;;chr2:239148671..239148686,-!p1@HES6!1.42!90.67!HES6;;chr17:59477233..59477263,+!p1@TBX2!1.38!70.14!TBX2;;chr14:29235961..29236008,+!p1@FOXG1!1.37!22.24!FOXG1;;chr20:62680984..62680999,-!p1@SOX18!1.34!27.37!SOX18;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.33!20.53!HOXC5;;chr17:59477275..59477286,+!p3@TBX2!1.28!23.95!TBX2;;chr11:47279504..47279563,+!p1@NR1H3!1.23!35.93!NR1H3;;chr20:55204351..55204377,+!p1@TFAP2C!1.20!18.82!TFAP2C;;chr17:46688334..46688385,-!p1@HOXB7!1.18!20.53!HOXB7;;chr1:209979467..209979494,-!p1@IRF6!1.17!15.40!IRF6;;chr1:25256439..25256476,-!p3@RUNX3!1.17!13.69!RUNX3;;chr17:46806067..46806097,-!p1@HOXB13!1.17!13.69!HOXB13;;chr17:7493405..7493419,-!p1@SOX15!1.17!13.69!SOX15;;chr5:2751762..2751784,-!p1@IRX2!1.17!13.69!IRX2;;chr5:321810..321877,+!p1@AHRR!1.16!42.77!AHRR;;chr6:10412392..10412409,-!p4@TFAP2A!1.11!13.69!TFAP2A;;chr5:3595961..3595975,+!p3@IRX1!1.11!11.98!IRX1;;chr6:10412576..10412599,-!p5@TFAP2A!1.11!11.98!TFAP2A;;chr7:31380292..31380351,-!p1@NEUROD6!1.11!11.98!NEUROD6;;chr17:46806035..46806059,-!p2@HOXB13!1.11!11.98!HOXB13;;chr11:34642612..34642646,+!p1@EHF!1.11!11.98!EHF;;chr12:54447637..54447659,+!p4@HOXC4!1.11!11.98!HOXC4;;chr9:102584262..102584276,+!p1@NR4A3!1.07!23.95!NR4A3;;chr2:239756671..239756732,+!p1@TWIST2!1.06!34.21!TWIST2;;chr15:42749722..42749739,-!p2@ZFP106!1.06!18.82!ZFP106;;chr8:72756267..72756296,-!p4@MSC!1.06!15.40!MSC;;chr6:10415263..10415274,-!p8@TFAP2A!1.05!10.26!TFAP2A;;chr8:72756380..72756427,-!p8@MSC!1.05!10.26!MSC;;chr2:119605214..119605230,-!p1@EN1!1.05!10.26!EN1;;chr1:63788229..63788250,+!p1@FOXD3!1.05!10.26!FOXD3;;chr1:6479968..6479986,-!p1@HES2!1.05!10.26!HES2;;chr16:67198683..67198698,+!p2@HSF4!1.05!10.26!HSF4;;chr8:72756063..72756125,-!p1@MSC!1.04!20.53!MSC;;chr7:19157248..19157268,-!p1@TWIST1!1.03!27.37!TWIST1;;chr11:65667884..65667895,-!p2@FOSL1!1.02!37.64!FOSL1;;chr8:22550982..22550999,-!p1@EGR3!1.00!25.66!EGR3;;chr12:54380404..54380433,+!p3@HOXC10!0.98!8.55!HOXC10;;chr2:176994408..176994492,+!p1@HOXD8!0.98!8.55!HOXD8;;chr17:8027418..8027432,-!p1@HES7!0.98!8.55!HES7;;chr20:50179368..50179392,-!p2@NFATC2!0.95!10.26!NFATC2;;chr19:33793430..33793447,-!p1@CEBPA!0.93!32.50!CEBPA;;chr12:54785054..54785072,-!p4@ZNF385A!0.93!8.55!ZNF385A;;chr1:170632285..170632309,+!p1@PRRX1!0.93!8.55!PRRX1;;chr6:1389789..1389821,+!p1@FOXF2!0.92!10.26!FOXF2;;chr6:34204973..34204990,+!p4@HMGA1!0.90!97.51!HMGA1;;chr1:204042233..204042249,+!p1@SOX13!0.90!46.19!SOX13;;chr19:38720294..38720348,-!p1@DPF1!0.89!8.55!DPF1;;chr5:172662197..172662216,-!p1@NKX2-5!0.89!6.84!NKX2-5;;chr8:55370487..55370503,+!p1@SOX17!0.89!6.84!SOX17;;chr8:72756522..72756533,-!p13@MSC!0.89!6.84!MSC;;chr16:29819122..29819141,+!p34@MAZ!0.89!6.84!MAZ;;chr16:67198633..67198671,+!p1@HSF4!0.89!6.84!HSF4;;chr17:37764128..37764258,-!p1@NEUROD2!0.89!6.84!NEUROD2;;chr17:46682321..46682362,-!p1@HOXB6!0.89!6.84!HOXB6;;chr2:5832493..5832507,+!p2@SOX11!0.89!6.84!SOX11;;chr3:189507432..189507459,+!p1@TP63!0.89!6.84!TP63;;chr12:54393880..54393962,+!p1@HOXC9!0.89!6.84!HOXC9;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.82!OSR1;;chr17:41623692..41623715,-!p1@ETV4!0.87!29.08!ETV4;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.87!6.84!GLIS1;;chr19:3572925..3573014,+!p1@HMG20B!0.85!188.18!HMG20B;;chr11:65667846..65667868,-!p1@FOSL1!0.85!171.07!FOSL1;;chr2:74730430..74730451,-!p1@LBX2!0.85!10.26!LBX2;;chr8:37553292..37553317,+!p1@ZNF703!0.83!145.41!ZNF703;;chr20:32274179..32274213,-!p1@E2F1!0.83!41.06!E2F1;;chr17:59477197..59477212,+!p2@TBX2!0.83!10.26!TBX2;;chr2:71127699..71127744,+!p1@VAX2!0.82!11.98!VAX2;;chr17:7492684..7492778,-!p2@SOX15!0.81!11.98!SOX15;;chr9:102584159..102584174,+!p2@NR4A3!0.81!10.26!NR4A3;;chr19:35759824..35759891,+!p1@USF2!0.80!177.92!USF2;;chr12:2986275..2986363,-!p1@FOXM1!0.80!58.16!FOXM1;;chr8:128748308..128748324,+!p2@MYC!0.79!157.39!MYC;;chr19:42788611..42788634,+!p2@CIC!0.79!8.55!CIC;;chr11:62369806..62369837,-!p8@MTA2!0.79!6.84!MTA2;;chr8:72756213..72756243,-!p5@MSC!0.79!6.84!MSC;;chr5:134369879..134369898,-!p2@PITX1!0.79!5.13!PITX1;;chr7:27205136..27205164,-!p1@HOXA9!0.79!5.13!HOXA9;;chr19:46801639..46801699,+!p1@HIF3A!0.79!5.13!HIF3A;;chr19:57946675..57946680,+!p2@ZNF749!0.79!5.13!ZNF749;;chr1:203055129..203055147,-!p1@MYOG!0.79!5.13!MYOG;;chr2:145271342..145271377,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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000147;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000148;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000710;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002077;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002567 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 66: | Line 43: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|top_motifs= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor3.CNhs12033.11423-118G1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor3.CNhs12033.11423-118G1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor3.CNhs12033.11423-118G1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor3.CNhs12033.11423-118G1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520light%252c%2520donor3.CNhs12033.11423-118G1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11423-118G1 | |||
|is_a=EFO:0002091;;FF:0000090 | |||
|is_obsolete= | |||
|library_id=CNhs12033 | |||
|library_id_phase_based=2:CNhs12033 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11423 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.GTTTCG.11423 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11423 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.GTTTCG.11423 | |||
|name=Melanocyte - light, donor3 | |||
|namespace=FANTOM5 | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs12033,LSID837,release011,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=SRhi10009,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.705334769411622,0.324972282853373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898383000965605,0,0,0,0.216542687324989,0,0.33512747838192,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,1.48607602449179,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.140899892649225,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433085374649978,0,0,0,0,0,0,0,0,0,0.0288189193702153,0.182875792505784,0,0,0,0.167420599488967,0.111584903363507,0.216542687324989,0,0,0,0.547529260881044,0.0780654865240935,0,0,0,0,0,0,0.433085374649978,0,0,0,0,0,0,0,0,0,0,0.120169093402528,0,0,0,0.904157221510785,1.48750150271245,0,0,0,0,0,0 | |||
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| |||
|rna_box=118 | |||
|rna_catalog_number=CA104-R10n | |||
|rna_concentration=1 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0 | |||
|rna_lot_number=1259 | |||
|rna_od260/230= | |||
|rna_od260/280= | |||
|rna_position=G1 | |||
|rna_rin= | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=118G1 | |||
|rna_weight_ug=10 | |||
|rnaseq_library_id=SRhi10009.GTTTCG | |||
|sample_age=neonatal | |||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |||
|sample_cell_line= | |||
|sample_cell_lot=N/A | |||
|sample_cell_type=melanocyte | |||
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | |||
|sample_company=Cell Applications | |||
|sample_description= | |||
|sample_dev_stage=infant | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity=C | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.61087933880742e-216!GO:0005737;cytoplasm;7.64961082881921e-206!GO:0044444;cytoplasmic part;2.68803704939735e-150!GO:0043226;organelle;3.4686480696721e-147!GO:0043229;intracellular organelle;7.26217385422218e-147!GO:0043231;intracellular membrane-bound organelle;1.68777514757846e-139!GO:0043227;membrane-bound organelle;1.90109682378798e-139!GO:0044422;organelle part;3.22127056866916e-131!GO:0044446;intracellular organelle part;1.14864436660687e-129!GO:0005515;protein binding;1.20126433028128e-88!GO:0032991;macromolecular complex;2.18946161683204e-82!GO:0005739;mitochondrion;1.64384329804009e-70!GO:0044237;cellular metabolic process;1.28585491425975e-63!GO:0030529;ribonucleoprotein complex;7.67991138914192e-62!GO:0044238;primary metabolic process;1.92093554294221e-60!GO:0031090;organelle membrane;7.02286514193629e-57!GO:0043233;organelle lumen;2.12560411873683e-54!GO:0031974;membrane-enclosed lumen;2.12560411873683e-54!GO:0044429;mitochondrial part;1.799405627357e-48!GO:0043170;macromolecule metabolic process;7.44778083791402e-48!GO:0044428;nuclear part;4.3584204779235e-47!GO:0009058;biosynthetic process;1.02395353057693e-46!GO:0016043;cellular component organization and biogenesis;1.22371322994109e-46!GO:0043234;protein complex;3.26763659280234e-45!GO:0031967;organelle envelope;4.35255225873009e-44!GO:0031975;envelope;1.09659938291042e-43!GO:0005840;ribosome;1.37379646542169e-43!GO:0044249;cellular biosynthetic process;2.02487130809932e-43!GO:0019538;protein metabolic process;4.54595903340513e-43!GO:0003723;RNA binding;1.82063711899995e-41!GO:0006412;translation;6.92590117997185e-41!GO:0005829;cytosol;6.93121361095214e-39!GO:0044260;cellular macromolecule metabolic process;1.33381960009643e-38!GO:0003735;structural constituent of ribosome;7.21513664990822e-38!GO:0044267;cellular protein metabolic process;2.99735944705403e-37!GO:0009059;macromolecule biosynthetic process;1.92808018553162e-35!GO:0005740;mitochondrial envelope;1.94658723220157e-34!GO:0033279;ribosomal subunit;5.01696331232982e-34!GO:0048770;pigment granule;5.64254122168152e-34!GO:0042470;melanosome;5.64254122168152e-34!GO:0015031;protein transport;1.15006912885526e-33!GO:0033036;macromolecule localization;4.25147766797263e-33!GO:0005634;nucleus;7.6078802129571e-33!GO:0031966;mitochondrial membrane;1.5161194193946e-32!GO:0008104;protein localization;7.04878588545237e-32!GO:0045184;establishment of protein localization;1.7717705672918e-31!GO:0006996;organelle organization and biogenesis;2.27536959892448e-31!GO:0043228;non-membrane-bound organelle;1.43256134662047e-30!GO:0043232;intracellular non-membrane-bound organelle;1.43256134662047e-30!GO:0019866;organelle inner membrane;2.61836028343617e-30!GO:0046907;intracellular transport;8.38636559336592e-29!GO:0065003;macromolecular complex assembly;1.79341922603461e-28!GO:0005743;mitochondrial inner membrane;2.39826540962982e-28!GO:0031981;nuclear lumen;7.70873233977658e-28!GO:0022607;cellular component assembly;7.42151665235985e-27!GO:0006396;RNA processing;9.86064544983921e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.14174359072174e-26!GO:0006886;intracellular protein transport;3.41840887004293e-24!GO:0006119;oxidative phosphorylation;1.21245784885273e-22!GO:0012505;endomembrane system;2.99784003802313e-22!GO:0044445;cytosolic part;1.49226203375012e-21!GO:0005783;endoplasmic reticulum;3.95726953084387e-21!GO:0016071;mRNA metabolic process;4.99178216690821e-20!GO:0044455;mitochondrial membrane part;1.00923127925318e-19!GO:0051186;cofactor metabolic process;1.16757261390629e-19!GO:0051649;establishment of cellular localization;3.60921205075143e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.30466035814544e-19!GO:0031980;mitochondrial lumen;4.34523979025234e-19!GO:0005759;mitochondrial matrix;4.34523979025234e-19!GO:0051641;cellular localization;5.73770419226223e-19!GO:0043283;biopolymer metabolic process;5.97420844105973e-19!GO:0006259;DNA metabolic process;5.97420844105973e-19!GO:0008380;RNA splicing;1.79770120596456e-18!GO:0015935;small ribosomal subunit;1.4000192897792e-17!GO:0015934;large ribosomal subunit;1.76730334853382e-17!GO:0007049;cell cycle;2.88561145859069e-17!GO:0005746;mitochondrial respiratory chain;3.74246674578826e-17!GO:0006397;mRNA processing;3.9224148766459e-17!GO:0000166;nucleotide binding;7.4344809215312e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;8.68952849970381e-17!GO:0016462;pyrophosphatase activity;9.32984396966948e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.93806537374337e-17!GO:0044432;endoplasmic reticulum part;3.12476756623021e-16!GO:0008134;transcription factor binding;3.28693456644469e-16!GO:0017111;nucleoside-triphosphatase activity;3.47990356089733e-16!GO:0005654;nucleoplasm;5.2360153623969e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.55898903695238e-15!GO:0050136;NADH dehydrogenase (quinone) activity;4.32741567900179e-15!GO:0003954;NADH dehydrogenase activity;4.32741567900179e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.32741567900179e-15!GO:0006732;coenzyme metabolic process;4.36387732330708e-15!GO:0005794;Golgi apparatus;5.13250320340527e-15!GO:0016874;ligase activity;9.82226999370741e-15!GO:0006605;protein targeting;3.21637504653215e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.52605965592719e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.90184685669924e-14!GO:0000502;proteasome complex (sensu Eukaryota);6.2909142409088e-14!GO:0022402;cell cycle process;9.46910997294301e-14!GO:0010467;gene expression;1.14107562654823e-13!GO:0044451;nucleoplasm part;1.24126836754902e-13!GO:0006457;protein folding;1.26823218268503e-13!GO:0005681;spliceosome;1.53357227033059e-13!GO:0005730;nucleolus;3.18922797274351e-13!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.53986076904015e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.41372820765094e-13!GO:0045271;respiratory chain complex I;5.41372820765094e-13!GO:0005747;mitochondrial respiratory chain complex I;5.41372820765094e-13!GO:0042775;organelle ATP synthesis coupled electron transport;7.35796322583987e-13!GO:0042773;ATP synthesis coupled electron transport;7.35796322583987e-13!GO:0012501;programmed cell death;7.81316005762109e-13!GO:0044248;cellular catabolic process;9.33934183452069e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.54032105853796e-13!GO:0006915;apoptosis;1.12572012439356e-12!GO:0017076;purine nucleotide binding;1.24195391979235e-12!GO:0032553;ribonucleotide binding;1.62186634366692e-12!GO:0032555;purine ribonucleotide binding;1.62186634366692e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.96463387035464e-12!GO:0044265;cellular macromolecule catabolic process;3.02509641192624e-12!GO:0016491;oxidoreductase activity;9.2011047700757e-12!GO:0016023;cytoplasmic membrane-bound vesicle;9.39811865605626e-12!GO:0008219;cell death;9.39811865605626e-12!GO:0016265;death;9.39811865605626e-12!GO:0031988;membrane-bound vesicle;9.51538422363824e-12!GO:0000278;mitotic cell cycle;9.52593148243504e-12!GO:0016192;vesicle-mediated transport;1.59301378506325e-11!GO:0009057;macromolecule catabolic process;1.77642381979324e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.86394949300635e-11!GO:0009055;electron carrier activity;2.09238773139988e-11!GO:0022618;protein-RNA complex assembly;2.42602191514688e-11!GO:0006366;transcription from RNA polymerase II promoter;2.50093884186338e-11!GO:0005789;endoplasmic reticulum membrane;2.6477233906845e-11!GO:0043285;biopolymer catabolic process;3.28147032802525e-11!GO:0048523;negative regulation of cellular process;5.5345111006927e-11!GO:0005773;vacuole;5.5345111006927e-11!GO:0005761;mitochondrial ribosome;5.70594864650033e-11!GO:0000313;organellar ribosome;5.70594864650033e-11!GO:0051082;unfolded protein binding;5.77956107857895e-11!GO:0005635;nuclear envelope;6.12051997940979e-11!GO:0051726;regulation of cell cycle;1.25179220483948e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;1.48994431573997e-10!GO:0006512;ubiquitin cycle;1.63043468495333e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.96531013522218e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.03314231346902e-10!GO:0051188;cofactor biosynthetic process;2.03314231346902e-10!GO:0019941;modification-dependent protein catabolic process;2.21053298049058e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.21053298049058e-10!GO:0005524;ATP binding;2.32632269182055e-10!GO:0044257;cellular protein catabolic process;2.32632269182055e-10!GO:0006511;ubiquitin-dependent protein catabolic process;2.32632269182055e-10!GO:0032559;adenyl ribonucleotide binding;2.40089472675185e-10!GO:0030554;adenyl nucleotide binding;2.48844773015838e-10!GO:0000074;regulation of progression through cell cycle;2.55394107043731e-10!GO:0003712;transcription cofactor activity;3.63085558371812e-10!GO:0030163;protein catabolic process;3.79034581694984e-10!GO:0006461;protein complex assembly;5.15258485167455e-10!GO:0043412;biopolymer modification;5.75911416861401e-10!GO:0031982;vesicle;6.33252079328115e-10!GO:0015078;hydrogen ion transmembrane transporter activity;7.14539103860687e-10!GO:0006323;DNA packaging;8.05878860238759e-10!GO:0031410;cytoplasmic vesicle;8.51257279087088e-10!GO:0048519;negative regulation of biological process;9.41695144419211e-10!GO:0005793;ER-Golgi intermediate compartment;1.2605674121238e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.37548759903674e-09!GO:0008135;translation factor activity, nucleic acid binding;1.4152205354661e-09!GO:0006163;purine nucleotide metabolic process;1.49431807346038e-09!GO:0005768;endosome;1.50532281587975e-09!GO:0031965;nuclear membrane;1.86155341428978e-09!GO:0000323;lytic vacuole;1.91801552414995e-09!GO:0005764;lysosome;1.91801552414995e-09!GO:0042623;ATPase activity, coupled;2.01490161060205e-09!GO:0048193;Golgi vesicle transport;2.30115122785756e-09!GO:0006464;protein modification process;2.31498200048226e-09!GO:0009150;purine ribonucleotide metabolic process;2.65967208577296e-09!GO:0051276;chromosome organization and biogenesis;2.66833797002195e-09!GO:0042981;regulation of apoptosis;3.47728780236255e-09!GO:0043067;regulation of programmed cell death;4.74470675104935e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.82377629508837e-09!GO:0009141;nucleoside triphosphate metabolic process;4.94787386282479e-09!GO:0044453;nuclear membrane part;5.54432271125989e-09!GO:0015986;ATP synthesis coupled proton transport;5.65774441988168e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.65774441988168e-09!GO:0016469;proton-transporting two-sector ATPase complex;5.83210538693981e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.11598268722218e-09!GO:0009144;purine nucleoside triphosphate metabolic process;6.11598268722218e-09!GO:0006164;purine nucleotide biosynthetic process;6.51032754944207e-09!GO:0009259;ribonucleotide metabolic process;6.84416183632863e-09!GO:0006913;nucleocytoplasmic transport;7.63665594356203e-09!GO:0016887;ATPase activity;9.45815400042744e-09!GO:0006091;generation of precursor metabolites and energy;1.08814111910388e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.13745422644187e-08!GO:0000785;chromatin;1.14698911953563e-08!GO:0046034;ATP metabolic process;1.2411980090818e-08!GO:0009060;aerobic respiration;1.25369465158889e-08!GO:0065004;protein-DNA complex assembly;1.48888315855145e-08!GO:0042254;ribosome biogenesis and assembly;1.49534489923692e-08!GO:0051169;nuclear transport;1.69664294837344e-08!GO:0019829;cation-transporting ATPase activity;1.83215681254914e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.88856730037514e-08!GO:0008565;protein transporter activity;1.89554104074807e-08!GO:0017038;protein import;2.00087164960804e-08!GO:0009056;catabolic process;2.43502247071439e-08!GO:0005694;chromosome;2.62637614478054e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.40193756281498e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.40193756281498e-08!GO:0045333;cellular respiration;3.40193756281498e-08!GO:0022403;cell cycle phase;4.08831040838177e-08!GO:0009260;ribonucleotide biosynthetic process;4.29262434000261e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.33740482355912e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.33740482355912e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;6.12347653109058e-08!GO:0000375;RNA splicing, via transesterification reactions;6.12347653109058e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.12347653109058e-08!GO:0006754;ATP biosynthetic process;7.14682786526429e-08!GO:0006753;nucleoside phosphate metabolic process;7.14682786526429e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.2821019271478e-08!GO:0004812;aminoacyl-tRNA ligase activity;7.2821019271478e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.2821019271478e-08!GO:0009108;coenzyme biosynthetic process;7.70788970602392e-08!GO:0043687;post-translational protein modification;8.45504474047159e-08!GO:0006916;anti-apoptosis;8.81376452753415e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.85747329139298e-08!GO:0003743;translation initiation factor activity;1.15551419915198e-07!GO:0006333;chromatin assembly or disassembly;1.18453887446701e-07!GO:0006974;response to DNA damage stimulus;1.19219797096631e-07!GO:0006334;nucleosome assembly;1.26022152750351e-07!GO:0044427;chromosomal part;1.39001803445501e-07!GO:0044262;cellular carbohydrate metabolic process;1.41613306329671e-07!GO:0009117;nucleotide metabolic process;1.55080895818549e-07!GO:0007005;mitochondrion organization and biogenesis;1.5775320184546e-07!GO:0006446;regulation of translational initiation;1.82355497393209e-07!GO:0043038;amino acid activation;1.82355497393209e-07!GO:0006418;tRNA aminoacylation for protein translation;1.82355497393209e-07!GO:0043039;tRNA aminoacylation;1.82355497393209e-07!GO:0007067;mitosis;2.94184804058689e-07!GO:0006399;tRNA metabolic process;3.09994886205565e-07!GO:0000087;M phase of mitotic cell cycle;3.48086697146838e-07!GO:0005788;endoplasmic reticulum lumen;3.64643963722614e-07!GO:0006413;translational initiation;3.78849160524878e-07!GO:0044431;Golgi apparatus part;3.91777283907134e-07!GO:0051187;cofactor catabolic process;4.10273256432848e-07!GO:0008639;small protein conjugating enzyme activity;4.52268486695149e-07!GO:0043069;negative regulation of programmed cell death;4.56439265358217e-07!GO:0006099;tricarboxylic acid cycle;4.61904363507112e-07!GO:0046356;acetyl-CoA catabolic process;4.61904363507112e-07!GO:0006084;acetyl-CoA metabolic process;4.65595689183299e-07!GO:0009719;response to endogenous stimulus;4.80649395242742e-07!GO:0048468;cell development;5.76820203364626e-07!GO:0043066;negative regulation of apoptosis;5.83092683880792e-07!GO:0048475;coated membrane;5.83092683880792e-07!GO:0030117;membrane coat;5.83092683880792e-07!GO:0006752;group transfer coenzyme metabolic process;6.54844396808643e-07!GO:0005643;nuclear pore;6.97096750134532e-07!GO:0008092;cytoskeletal protein binding;7.22458123384337e-07!GO:0016564;transcription repressor activity;7.59333961004705e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.62983893976477e-07!GO:0006260;DNA replication;8.15188978759777e-07!GO:0005770;late endosome;8.42487175797726e-07!GO:0031497;chromatin assembly;9.01093504728637e-07!GO:0009109;coenzyme catabolic process;9.62890265316246e-07!GO:0016740;transferase activity;1.00153520701153e-06!GO:0004842;ubiquitin-protein ligase activity;1.02928774950713e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.18166131310452e-06!GO:0048522;positive regulation of cellular process;1.23428864055452e-06!GO:0006793;phosphorus metabolic process;1.26603196427557e-06!GO:0006796;phosphate metabolic process;1.26603196427557e-06!GO:0065002;intracellular protein transport across a membrane;1.29867189248399e-06!GO:0003924;GTPase activity;1.30787607283223e-06!GO:0015980;energy derivation by oxidation of organic compounds;1.5614047244046e-06!GO:0051246;regulation of protein metabolic process;1.63748990110839e-06!GO:0019787;small conjugating protein ligase activity;1.71660183732061e-06!GO:0006082;organic acid metabolic process;2.21939359046258e-06!GO:0045786;negative regulation of progression through cell cycle;2.27578151536256e-06!GO:0045259;proton-transporting ATP synthase complex;2.47314208899336e-06!GO:0006364;rRNA processing;2.47314208899336e-06!GO:0019752;carboxylic acid metabolic process;2.47597629708852e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.79311140459313e-06!GO:0044440;endosomal part;2.8862739626742e-06!GO:0010008;endosome membrane;2.8862739626742e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.9826062480408e-06!GO:0003714;transcription corepressor activity;4.0035215531434e-06!GO:0030532;small nuclear ribonucleoprotein complex;4.26451303975187e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.48065857984959e-06!GO:0015399;primary active transmembrane transporter activity;4.48065857984959e-06!GO:0031252;leading edge;4.63698979706354e-06!GO:0016072;rRNA metabolic process;4.9988291757407e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.49789335153312e-06!GO:0046930;pore complex;5.49789335153312e-06!GO:0001558;regulation of cell growth;6.04238845097515e-06!GO:0030120;vesicle coat;6.04238845097515e-06!GO:0030662;coated vesicle membrane;6.04238845097515e-06!GO:0016310;phosphorylation;6.9354881564944e-06!GO:0042440;pigment metabolic process;6.9354881564944e-06!GO:0030036;actin cytoskeleton organization and biogenesis;7.39058881381079e-06!GO:0016787;hydrolase activity;8.01162877795937e-06!GO:0051301;cell division;8.38819400029094e-06!GO:0006281;DNA repair;9.52831729344404e-06!GO:0051325;interphase;1.01987422027148e-05!GO:0051329;interphase of mitotic cell cycle;1.04206673001703e-05!GO:0030659;cytoplasmic vesicle membrane;1.15948728902166e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;1.35171051488488e-05!GO:0008361;regulation of cell size;1.35580723766462e-05!GO:0016881;acid-amino acid ligase activity;1.36104975841409e-05!GO:0042802;identical protein binding;1.37970740100595e-05!GO:0015630;microtubule cytoskeleton;1.40980178248932e-05!GO:0016049;cell growth;1.47625110371145e-05!GO:0065009;regulation of a molecular function;1.49745230658759e-05!GO:0008610;lipid biosynthetic process;1.49972986192688e-05!GO:0005798;Golgi-associated vesicle;1.49972986192688e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.5106427800378e-05!GO:0016604;nuclear body;1.53653523978337e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.62030666631417e-05!GO:0007010;cytoskeleton organization and biogenesis;1.77575598017644e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.79451123843362e-05!GO:0031324;negative regulation of cellular metabolic process;1.88973384445883e-05!GO:0046148;pigment biosynthetic process;1.88973384445883e-05!GO:0008654;phospholipid biosynthetic process;2.09559288094926e-05!GO:0005667;transcription factor complex;2.16364723487963e-05!GO:0051170;nuclear import;2.552645620494e-05!GO:0000786;nucleosome;2.552645620494e-05!GO:0016568;chromatin modification;2.59831950828972e-05!GO:0005762;mitochondrial large ribosomal subunit;3.03850855311985e-05!GO:0000315;organellar large ribosomal subunit;3.03850855311985e-05!GO:0043623;cellular protein complex assembly;3.08607514187531e-05!GO:0044433;cytoplasmic vesicle part;3.20255174367603e-05!GO:0006606;protein import into nucleus;3.27051450121593e-05!GO:0005769;early endosome;3.50560363920876e-05!GO:0031968;organelle outer membrane;3.54767345262272e-05!GO:0000279;M phase;3.72784708735801e-05!GO:0005905;coated pit;3.84904325216146e-05!GO:0019867;outer membrane;3.89875045027809e-05!GO:0009892;negative regulation of metabolic process;4.19979045994355e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.27922931323316e-05!GO:0030029;actin filament-based process;4.27922931323316e-05!GO:0019899;enzyme binding;4.45937807357268e-05!GO:0016563;transcription activator activity;4.57247393263427e-05!GO:0048518;positive regulation of biological process;5.21511156117988e-05!GO:0012506;vesicle membrane;5.41110987200068e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.63107048165965e-05!GO:0040008;regulation of growth;5.63107048165965e-05!GO:0022890;inorganic cation transmembrane transporter activity;6.51050828127676e-05!GO:0007243;protein kinase cascade;6.69947713072144e-05!GO:0006818;hydrogen transport;6.88788862047471e-05!GO:0005741;mitochondrial outer membrane;7.08724574746015e-05!GO:0004298;threonine endopeptidase activity;8.17258896736358e-05!GO:0000139;Golgi membrane;8.56265090386754e-05!GO:0015992;proton transport;8.64208841776022e-05!GO:0003697;single-stranded DNA binding;9.09707572592202e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000104353761861874!GO:0045454;cell redox homeostasis;0.000105248198422745!GO:0016567;protein ubiquitination;0.000109249241244259!GO:0005774;vacuolar membrane;0.000116641031815926!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000119470708199365!GO:0019843;rRNA binding;0.000124619798884266!GO:0030867;rough endoplasmic reticulum membrane;0.000151003222188575!GO:0032446;protein modification by small protein conjugation;0.000151224694442217!GO:0016853;isomerase activity;0.000151947908123187!GO:0033116;ER-Golgi intermediate compartment membrane;0.000169713247022674!GO:0009165;nucleotide biosynthetic process;0.000172281459524037!GO:0003713;transcription coactivator activity;0.00017357201758954!GO:0019748;secondary metabolic process;0.000179245283002433!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000203693512262769!GO:0006979;response to oxidative stress;0.00023350471184744!GO:0044255;cellular lipid metabolic process;0.000258941148772266!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000260389999595857!GO:0050790;regulation of catalytic activity;0.000263293037514483!GO:0016044;membrane organization and biogenesis;0.000283714623969112!GO:0005048;signal sequence binding;0.000293907751805492!GO:0048471;perinuclear region of cytoplasm;0.00032539732707444!GO:0005525;GTP binding;0.000325622417890075!GO:0000245;spliceosome assembly;0.000367451785331025!GO:0046467;membrane lipid biosynthetic process;0.000377171453125372!GO:0046474;glycerophospholipid biosynthetic process;0.000378138031682153!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000397733649697832!GO:0044437;vacuolar part;0.000404847393346701!GO:0016607;nuclear speck;0.000466661831602521!GO:0008026;ATP-dependent helicase activity;0.000481963757523815!GO:0048066;pigmentation during development;0.000497925903625591!GO:0000151;ubiquitin ligase complex;0.000555678201646778!GO:0006643;membrane lipid metabolic process;0.000596433046813571!GO:0043681;protein import into mitochondrion;0.000618176750164541!GO:0005765;lysosomal membrane;0.000654768066367603!GO:0005791;rough endoplasmic reticulum;0.000656273508746174!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000669947818785276!GO:0050657;nucleic acid transport;0.00068051644728212!GO:0051236;establishment of RNA localization;0.00068051644728212!GO:0050658;RNA transport;0.00068051644728212!GO:0007006;mitochondrial membrane organization and biogenesis;0.000713522034325037!GO:0019318;hexose metabolic process;0.000723263964858961!GO:0030133;transport vesicle;0.00073602280787615!GO:0003676;nucleic acid binding;0.000737059177667115!GO:0051427;hormone receptor binding;0.000748356949380391!GO:0045941;positive regulation of transcription;0.000771565972216405!GO:0006613;cotranslational protein targeting to membrane;0.000788708876716088!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000808073710313652!GO:0008250;oligosaccharyl transferase complex;0.000837375030228687!GO:0030118;clathrin coat;0.000857038416528284!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00086222873234779!GO:0006403;RNA localization;0.000862629182445535!GO:0005885;Arp2/3 protein complex;0.000987981651791923!GO:0043566;structure-specific DNA binding;0.000989100317626809!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000989100317626809!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00100589829784092!GO:0016126;sterol biosynthetic process;0.00100589829784092!GO:0031902;late endosome membrane;0.00100744596631806!GO:0051338;regulation of transferase activity;0.00103252446502086!GO:0050662;coenzyme binding;0.00105879580005796!GO:0006626;protein targeting to mitochondrion;0.00108944840316666!GO:0033673;negative regulation of kinase activity;0.00109028484003286!GO:0006469;negative regulation of protein kinase activity;0.00109028484003286!GO:0016779;nucleotidyltransferase activity;0.00114288750217164!GO:0051920;peroxiredoxin activity;0.00117020325783297!GO:0005996;monosaccharide metabolic process;0.00120371730530591!GO:0046983;protein dimerization activity;0.00120821406126362!GO:0016481;negative regulation of transcription;0.00120821406126362!GO:0051348;negative regulation of transferase activity;0.00121943056422361!GO:0006629;lipid metabolic process;0.001230842986752!GO:0005975;carbohydrate metabolic process;0.00123447949407364!GO:0006650;glycerophospholipid metabolic process;0.00124943630771754!GO:0048037;cofactor binding;0.00129596279439373!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00133861978592424!GO:0005819;spindle;0.00134330473345615!GO:0030176;integral to endoplasmic reticulum membrane;0.0013454726450376!GO:0045893;positive regulation of transcription, DNA-dependent;0.00136564922549522!GO:0035257;nuclear hormone receptor binding;0.00137777240890318!GO:0006778;porphyrin metabolic process;0.0014324120364924!GO:0033013;tetrapyrrole metabolic process;0.0014324120364924!GO:0006509;membrane protein ectodomain proteolysis;0.00160421191989503!GO:0033619;membrane protein proteolysis;0.00160421191989503!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0016148723822732!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00161672684830262!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00161672684830262!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00161672684830262!GO:0008632;apoptotic program;0.00166932367227953!GO:0006807;nitrogen compound metabolic process;0.00177171565123153!GO:0003724;RNA helicase activity;0.00177171565123153!GO:0046519;sphingoid metabolic process;0.00179638845418178!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00182546901582971!GO:0007040;lysosome organization and biogenesis;0.00191420352708935!GO:0004576;oligosaccharyl transferase activity;0.00191870739357058!GO:0004386;helicase activity;0.00199068328409052!GO:0043065;positive regulation of apoptosis;0.00208106934662941!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00208885152577579!GO:0030145;manganese ion binding;0.0021156422242112!GO:0032561;guanyl ribonucleotide binding;0.0021156422242112!GO:0019001;guanyl nucleotide binding;0.0021156422242112!GO:0033162;melanosome membrane;0.00212056933509408!GO:0045009;chitosome;0.00212056933509408!GO:0045792;negative regulation of cell size;0.00224124681783483!GO:0006672;ceramide metabolic process;0.00226108107444173!GO:0043549;regulation of kinase activity;0.00240464303318473!GO:0043068;positive regulation of programmed cell death;0.00240743541078083!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00245439009804129!GO:0009967;positive regulation of signal transduction;0.00251820313202344!GO:0004860;protein kinase inhibitor activity;0.00252784296933207!GO:0051287;NAD binding;0.0025698838792889!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00260235466906961!GO:0051789;response to protein stimulus;0.00260235466906961!GO:0006986;response to unfolded protein;0.00260235466906961!GO:0000059;protein import into nucleus, docking;0.00261201626812849!GO:0006695;cholesterol biosynthetic process;0.00261201626812849!GO:0001726;ruffle;0.00263116638123963!GO:0016197;endosome transport;0.00263759814261539!GO:0030308;negative regulation of cell growth;0.00263759814261539!GO:0008637;apoptotic mitochondrial changes;0.00277756807032683!GO:0043021;ribonucleoprotein binding;0.0027825733838913!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00290424584081354!GO:0048487;beta-tubulin binding;0.00297732488064141!GO:0015631;tubulin binding;0.00298482562275314!GO:0006066;alcohol metabolic process;0.00315488693644919!GO:0006118;electron transport;0.00318649627827829!GO:0006612;protein targeting to membrane;0.00319350136076124!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00322075118535902!GO:0007050;cell cycle arrest;0.00323372795653531!GO:0000902;cell morphogenesis;0.00331359048924211!GO:0032989;cellular structure morphogenesis;0.00331359048924211!GO:0043488;regulation of mRNA stability;0.00331359048924211!GO:0043487;regulation of RNA stability;0.00331359048924211!GO:0003899;DNA-directed RNA polymerase activity;0.00343481662568758!GO:0050794;regulation of cellular process;0.00343760325256783!GO:0005813;centrosome;0.00352994666547049!GO:0018196;peptidyl-asparagine modification;0.00375187496609069!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00375187496609069!GO:0007033;vacuole organization and biogenesis;0.00375187496609069!GO:0043086;negative regulation of catalytic activity;0.00383895828231206!GO:0006779;porphyrin biosynthetic process;0.00386384696742155!GO:0033014;tetrapyrrole biosynthetic process;0.00386384696742155!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0038782893690179!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0038782893690179!GO:0045859;regulation of protein kinase activity;0.0039168162921497!GO:0009308;amine metabolic process;0.00392624028047196!GO:0005874;microtubule;0.00394388069691869!GO:0006839;mitochondrial transport;0.00399112845926265!GO:0006520;amino acid metabolic process;0.00416840312011668!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00421252564093856!GO:0043284;biopolymer biosynthetic process;0.00428153065853567!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00433276885737928!GO:0000314;organellar small ribosomal subunit;0.00436597905205448!GO:0005763;mitochondrial small ribosomal subunit;0.00436597905205448!GO:0030119;AP-type membrane coat adaptor complex;0.00463778276272223!GO:0030663;COPI coated vesicle membrane;0.00489395472724981!GO:0030126;COPI vesicle coat;0.00489395472724981!GO:0006644;phospholipid metabolic process;0.00490528782058646!GO:0030137;COPI-coated vesicle;0.00505158139476253!GO:0016859;cis-trans isomerase activity;0.00517488902908129!GO:0016070;RNA metabolic process;0.00531406405952283!GO:0030131;clathrin adaptor complex;0.00533391014960781!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00539002389668404!GO:0008186;RNA-dependent ATPase activity;0.00562014181158996!GO:0030132;clathrin coat of coated pit;0.00585318565047303!GO:0007346;regulation of progression through mitotic cell cycle;0.00601347936621398!GO:0008047;enzyme activator activity;0.00601347936621398!GO:0030027;lamellipodium;0.00601995093254908!GO:0017166;vinculin binding;0.00610525374053883!GO:0042168;heme metabolic process;0.00641337397324177!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00665138833840418!GO:0005815;microtubule organizing center;0.0067224377528409!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0067224377528409!GO:0006950;response to stress;0.00706430367607725!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00724546898386591!GO:0015002;heme-copper terminal oxidase activity;0.00724546898386591!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00724546898386591!GO:0004129;cytochrome-c oxidase activity;0.00724546898386591!GO:0051168;nuclear export;0.00732435876097314!GO:0005637;nuclear inner membrane;0.00768250692869571!GO:0030880;RNA polymerase complex;0.0078315624564184!GO:0006414;translational elongation;0.0078869581199312!GO:0048069;eye pigmentation;0.00804646826961591!GO:0046483;heterocycle metabolic process;0.00814696648882461!GO:0051028;mRNA transport;0.00820376375247508!GO:0008629;induction of apoptosis by intracellular signals;0.00820376375247508!GO:0005684;U2-dependent spliceosome;0.00879883696205222!GO:0003779;actin binding;0.00881564258616719!GO:0004177;aminopeptidase activity;0.00890144878251427!GO:0048154;S100 beta binding;0.00893792594461456!GO:0035258;steroid hormone receptor binding;0.00906956433710558!GO:0046489;phosphoinositide biosynthetic process;0.00955944704787851!GO:0051252;regulation of RNA metabolic process;0.00956363455794005!GO:0045892;negative regulation of transcription, DNA-dependent;0.0100102563274657!GO:0031589;cell-substrate adhesion;0.0103358729504979!GO:0000287;magnesium ion binding;0.0104223838529568!GO:0051128;regulation of cellular component organization and biogenesis;0.0105750730621365!GO:0008283;cell proliferation;0.0107060560947084!GO:0007034;vacuolar transport;0.0107278493251341!GO:0003682;chromatin binding;0.0107897015859579!GO:0050789;regulation of biological process;0.010863331549187!GO:0006007;glucose catabolic process;0.0110413940564961!GO:0045926;negative regulation of growth;0.0111303386639383!GO:0006726;eye pigment biosynthetic process;0.0112853607827569!GO:0042441;eye pigment metabolic process;0.0112853607827569!GO:0030031;cell projection biogenesis;0.0112853607827569!GO:0043154;negative regulation of caspase activity;0.0117091741974042!GO:0008287;protein serine/threonine phosphatase complex;0.012326443254025!GO:0008154;actin polymerization and/or depolymerization;0.0130721671590126!GO:0019210;kinase inhibitor activity;0.0131893582705405!GO:0004004;ATP-dependent RNA helicase activity;0.01320640509702!GO:0006917;induction of apoptosis;0.013228367355263!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0155880473442174!GO:0000428;DNA-directed RNA polymerase complex;0.0155880473442174!GO:0005869;dynactin complex;0.0157841428533878!GO:0030149;sphingolipid catabolic process;0.0158454984837306!GO:0051087;chaperone binding;0.0160289903706625!GO:0000082;G1/S transition of mitotic cell cycle;0.0166947379656163!GO:0006595;polyamine metabolic process;0.0168232847233204!GO:0031301;integral to organelle membrane;0.0168881061455949!GO:0008139;nuclear localization sequence binding;0.0169814724554453!GO:0006611;protein export from nucleus;0.0171185379903131!GO:0012502;induction of programmed cell death;0.0174591068940972!GO:0035035;histone acetyltransferase binding;0.0175510836527331!GO:0007264;small GTPase mediated signal transduction;0.0175638445676278!GO:0006897;endocytosis;0.0175693667820143!GO:0010324;membrane invagination;0.0175693667820143!GO:0030658;transport vesicle membrane;0.0177416451877048!GO:0006783;heme biosynthetic process;0.017916333141367!GO:0006006;glucose metabolic process;0.0179381343913932!GO:0004722;protein serine/threonine phosphatase activity;0.0179895935189371!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0186789054223258!GO:0006635;fatty acid beta-oxidation;0.0188661040204241!GO:0045936;negative regulation of phosphate metabolic process;0.0189686461499989!GO:0032508;DNA duplex unwinding;0.0193961492061423!GO:0032392;DNA geometric change;0.0193961492061423!GO:0003729;mRNA binding;0.0197894538278528!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0201574970501894!GO:0031072;heat shock protein binding;0.0208299423102578!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0209122771539793!GO:0010257;NADH dehydrogenase complex assembly;0.0209122771539793!GO:0033108;mitochondrial respiratory chain complex assembly;0.0209122771539793!GO:0051539;4 iron, 4 sulfur cluster binding;0.0210011722411734!GO:0007160;cell-matrix adhesion;0.0212128125275516!GO:0001836;release of cytochrome c from mitochondria;0.0216941970835514!GO:0050811;GABA receptor binding;0.0217065181558041!GO:0006733;oxidoreduction coenzyme metabolic process;0.0224265671856719!GO:0006740;NADPH regeneration;0.0225621940829119!GO:0006098;pentose-phosphate shunt;0.0225621940829119!GO:0006352;transcription initiation;0.022658439275164!GO:0007088;regulation of mitosis;0.0227701607228973!GO:0004674;protein serine/threonine kinase activity;0.0229763259127351!GO:0005862;muscle thin filament tropomyosin;0.023555322909738!GO:0033559;unsaturated fatty acid metabolic process;0.0236182989258721!GO:0006636;unsaturated fatty acid biosynthetic process;0.0236182989258721!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0240463127830931!GO:0006261;DNA-dependent DNA replication;0.0241513325371303!GO:0000910;cytokinesis;0.0242619056177661!GO:0008180;signalosome;0.024827813967039!GO:0051540;metal cluster binding;0.0250093162889674!GO:0051536;iron-sulfur cluster binding;0.0250093162889674!GO:0008286;insulin receptor signaling pathway;0.0251291164594772!GO:0006519;amino acid and derivative metabolic process;0.025457553212343!GO:0005657;replication fork;0.025457553212343!GO:0006749;glutathione metabolic process;0.025457553212343!GO:0043022;ribosome binding;0.025457553212343!GO:0004527;exonuclease activity;0.02594952929521!GO:0009303;rRNA transcription;0.0259779323431813!GO:0005832;chaperonin-containing T-complex;0.0260416901490746!GO:0003684;damaged DNA binding;0.0266983272701414!GO:0030496;midbody;0.0268239286127351!GO:0016860;intramolecular oxidoreductase activity;0.0268929662223266!GO:0007041;lysosomal transport;0.0271567045473257!GO:0019206;nucleoside kinase activity;0.0277396384317508!GO:0030518;steroid hormone receptor signaling pathway;0.0280446931942053!GO:0006582;melanin metabolic process;0.0280499500718563!GO:0006583;melanin biosynthetic process from tyrosine;0.0280499500718563!GO:0042438;melanin biosynthetic process;0.0280499500718563!GO:0008538;proteasome activator activity;0.0281394823446707!GO:0031529;ruffle organization and biogenesis;0.0284968500506256!GO:0048041;focal adhesion formation;0.0287004558574747!GO:0019887;protein kinase regulator activity;0.0301284902076116!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0303344508152491!GO:0006268;DNA unwinding during replication;0.0306700110338243!GO:0003746;translation elongation factor activity;0.0312682735007169!GO:0030521;androgen receptor signaling pathway;0.0315555163374843!GO:0016301;kinase activity;0.0330270978543958!GO:0006767;water-soluble vitamin metabolic process;0.0330789538775377!GO:0030134;ER to Golgi transport vesicle;0.0331318202549448!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.033668215483169!GO:0007265;Ras protein signal transduction;0.0342613906008505!GO:0016417;S-acyltransferase activity;0.0344524476798385!GO:0005856;cytoskeleton;0.0344859202253325!GO:0004448;isocitrate dehydrogenase activity;0.0345089910110057!GO:0031901;early endosome membrane;0.0348686399710762!GO:0050178;phenylpyruvate tautomerase activity;0.0349264838800462!GO:0006383;transcription from RNA polymerase III promoter;0.03494424567714!GO:0030503;regulation of cell redox homeostasis;0.0357500234796599!GO:0009893;positive regulation of metabolic process;0.0375150415563565!GO:0008094;DNA-dependent ATPase activity;0.0375299156546178!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0379772925330609!GO:0044452;nucleolar part;0.0380486695632825!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0380486695632825!GO:0046813;virion attachment, binding of host cell surface receptor;0.0380486695632825!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0380486695632825!GO:0030660;Golgi-associated vesicle membrane;0.038596451357975!GO:0043256;laminin complex;0.0392569268719521!GO:0030384;phosphoinositide metabolic process;0.0392569268719521!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0404141481455374!GO:0040029;regulation of gene expression, epigenetic;0.0404141481455374!GO:0032787;monocarboxylic acid metabolic process;0.0411828885877373!GO:0042326;negative regulation of phosphorylation;0.0429964424614677!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0431606905628087!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0431606905628087!GO:0043433;negative regulation of transcription factor activity;0.0433804417245517!GO:0030127;COPII vesicle coat;0.0439318149455171!GO:0012507;ER to Golgi transport vesicle membrane;0.0439318149455171!GO:0009966;regulation of signal transduction;0.0445438635739154!GO:0005881;cytoplasmic microtubule;0.0445450831569298!GO:0006914;autophagy;0.0457736940777763!GO:0000096;sulfur amino acid metabolic process;0.0459188657457923!GO:0030041;actin filament polymerization;0.0474402202912034!GO:0051059;NF-kappaB binding;0.0475542040124866!GO:0007242;intracellular signaling cascade;0.0478908283195608!GO:0001666;response to hypoxia;0.0483390564837213!GO:0030125;clathrin vesicle coat;0.0491100066610752!GO:0030665;clathrin coated vesicle membrane;0.0491100066610752!GO:0004680;casein kinase activity;0.0491100066610752!GO:0050749;apolipoprotein E receptor binding;0.0491106037550909!GO:0016584;nucleosome positioning;0.0491106037550909!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0496264766774308 | |||
|sample_id=11423 | |||
|sample_note= | |||
|sample_sex=male | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=skin | |||
|top_motifs=ZNF423:2.27751302525;ESRRA:2.18095642496;NFE2L1:1.74816082231;ZNF238:1.55956520847;HES1:1.52861958678;RXR{A,B,G}:1.42296085732;NR3C1:1.39011788766;NR5A1,2:1.34554612342;TBP:1.3347775567;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.32992815527;GZF1:1.27697218753;TFCP2:1.23802406677;bHLH_family:1.21529837866;PAX6:1.19075619165;HOX{A6,A7,B6,B7}:1.14380345684;GTF2A1,2:1.12146822092;IKZF1:1.08841803598;POU6F1:1.05019286461;HMX1:1.03133846836;TLX1..3_NFIC{dimer}:1.02639283671;POU2F1..3:1.00936128365;SOX{8,9,10}:0.920423279001;AR:0.890274529377;GLI1..3:0.889017641919;XCPE1{core}:0.884044106139;TP53:0.813077176082;SP1:0.770955766657;LHX3,4:0.75734783969;REST:0.753150146038;EBF1:0.742247151474;GCM1,2:0.733268235752;ZNF148:0.714703668771;GFI1:0.6959512459;ESR1:0.691067643388;RXRA_VDR{dimer}:0.631662720607;PRRX1,2:0.624827811962;HOX{A4,D4}:0.61875391683;POU3F1..4:0.60550689497;TFAP2{A,C}:0.577256180269;SREBF1,2:0.576701724515;MYOD1:0.533833463208;GTF2I:0.530034235036;FOXL1:0.52848505539;TFDP1:0.522299212843;NKX2-3_NKX2-5:0.508253127631;LMO2:0.508091313541;SPZ1:0.496513794104;SMAD1..7,9:0.457581516254;TFAP2B:0.418186747797;GFI1B:0.41787525266;EN1,2:0.398819234985;NANOG:0.387611665239;HIC1:0.361890885249;HNF4A_NR2F1,2:0.326000155028;NFY{A,B,C}:0.313121513303;SOX17:0.309529993147;MED-1{core}:0.309427499271;ZBTB6:0.287017223723;STAT2,4,6:0.249534539008;ONECUT1,2:0.217465682461;MAZ:0.214478790301;NFE2:0.209413848163;UFEwm:0.204791833804;PAX5:0.189724203228;FOSL2:0.181610018246;ATF6:0.176360142923;PAX2:0.165330870249;TOPORS:0.140594184751;EP300:0.140414347731;TFAP4:0.133322445691;POU1F1:0.129771222053;TAL1_TCF{3,4,12}:0.127840874892;MEF2{A,B,C,D}:0.126773066679;MTF1:0.121385575583;EGR1..3:0.121324921634;XBP1:0.118331386276;KLF4:0.113563852318;PAX8:0.110166883175;TEAD1:0.109018514787;YY1:0.105698289074;SRF:0.0908531125175;ZIC1..3:0.0891589360404;FOXQ1:0.0636431462692;FOS_FOS{B,L1}_JUN{B,D}:0.0522948587409;MZF1:0.0483140111324;AHR_ARNT_ARNT2:0.0481026014352;HOX{A5,B5}:0.0367561025651;CUX2:0.00838262792803;HNF1A:-0.0145568655062;ATF2:-0.0268273799609;E2F1..5:-0.0377117436773;DBP:-0.0417081887878;SOX5:-0.0420722878832;PPARG:-0.0625934705664;GATA6:-0.0660167078838;BACH2:-0.0694873051982;ARID5B:-0.0776351783027;SOX2:-0.0802122646275;NFE2L2:-0.0843058940102;NFIL3:-0.0909616657286;RORA:-0.108832753098;ZNF384:-0.137619603517;PAX1,9:-0.149604428823;NHLH1,2:-0.151923900462;MYBL2:-0.155564643935;CDC5L:-0.171931513391;LEF1_TCF7_TCF7L1,2:-0.175744608869;PBX1:-0.190643581318;RUNX1..3:-0.194446525201;HBP1_HMGB_SSRP1_UBTF:-0.206953782441;NANOG{mouse}:-0.21170783603;MAFB:-0.221214554069;JUN:-0.230112948474;BREu{core}:-0.241353690524;PATZ1:-0.246009071332;ETS1,2:-0.278484433364;MYFfamily:-0.288076013717;FOXP3:-0.294309685875;STAT5{A,B}:-0.303835146971;ZEB1:-0.310704036383;NFKB1_REL_RELA:-0.340263482063;ZNF143:-0.340405254004;RREB1:-0.34536637711;SNAI1..3:-0.354842600044;SPIB:-0.358396341862;OCT4_SOX2{dimer}:-0.359920778271;ADNP_IRX_SIX_ZHX:-0.360188590245;MTE{core}:-0.360894696119;CEBPA,B_DDIT3:-0.382507031163;RFX1:-0.400588366206;FOX{F1,F2,J1}:-0.404215519638;HLF:-0.414182274455;HAND1,2:-0.41658451735;PAX3,7:-0.430893789614;HOXA9_MEIS1:-0.439604732417;HIF1A:-0.440692015928;NFIX:-0.449989148842;PAX4:-0.463602685595;SPI1:-0.46779604611;FOX{D1,D2}:-0.474596547692;FOXM1:-0.506265024814;ZFP161:-0.512685318198;ALX4:-0.543695251399;ATF4:-0.594906726255;TLX2:-0.607439499167;TGIF1:-0.611268642817;NR6A1:-0.618104192892;TBX4,5:-0.64364697628;NFATC1..3:-0.668137910307;PRDM1:-0.691207565634;VSX1,2:-0.692144616307;ATF5_CREB3:-0.706333124861;POU5F1:-0.71135631222;NKX3-2:-0.717626218808;MYB:-0.726521263643;FOXO1,3,4:-0.784993852522;NKX6-1,2:-0.796135910597;RFX2..5_RFXANK_RFXAP:-0.812724681233;HSF1,2:-0.854813118965;AIRE:-0.855983150223;CRX:-0.859497147097;IRF7:-0.885484591299;FOXA2:-0.888528861255;FOX{I1,J2}:-0.933261975425;NKX2-1,4:-0.93373225529;IRF1,2:-0.951746091876;CREB1:-0.954492998693;ELF1,2,4:-0.963846560396;RBPJ:-0.991810054549;NRF1:-1.01920986791;DMAP1_NCOR{1,2}_SMARC:-1.03498794012;T:-1.03801721468;PITX1..3:-1.05939853337;GATA4:-1.10002776295;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.13892765399;TEF:-1.18602770232;FOXP1:-1.22807738642;ELK1,4_GABP{A,B1}:-1.28139991143;IKZF2:-1.29983802621;EVI1:-1.30861990315;ALX1:-1.32144015519;PDX1:-1.32908335304;NR1H4:-1.36825632158;ZBTB16:-1.41201715251;STAT1,3:-1.41633088676;BPTF:-1.43986367697;FOXD3:-1.49436342195;HMGA1,2:-1.52990916534;NKX3-1:-1.56938771594;CDX1,2,4:-1.59020080106;FOXN1:-2.0784870279;NKX2-2,8:-2.24053604494 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11423-118G1;search_select_hide=table117:FF:11423-118G1 | |||
}} | }} | ||
Latest revision as of 18:00, 4 June 2020
| Name: | Melanocyte - light, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12033 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12033
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12033
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.817 |
| 10 | 10 | 0.11 |
| 100 | 100 | 0.45 |
| 101 | 101 | 0.172 |
| 102 | 102 | 0.815 |
| 103 | 103 | 0.447 |
| 104 | 104 | 0.419 |
| 105 | 105 | 0.774 |
| 106 | 106 | 0.06 |
| 107 | 107 | 0.0518 |
| 108 | 108 | 0.362 |
| 109 | 109 | 0.776 |
| 11 | 11 | 0.359 |
| 110 | 110 | 0.248 |
| 111 | 111 | 0.538 |
| 112 | 112 | 0.625 |
| 113 | 113 | 0.472 |
| 114 | 114 | 0.49 |
| 115 | 115 | 0.274 |
| 116 | 116 | 0.219 |
| 117 | 117 | 0.602 |
| 118 | 118 | 0.885 |
| 119 | 119 | 0.7 |
| 12 | 12 | 0.305 |
| 120 | 120 | 0.694 |
| 121 | 121 | 0.637 |
| 122 | 122 | 0.748 |
| 123 | 123 | 0.422 |
| 124 | 124 | 0.901 |
| 125 | 125 | 0.921 |
| 126 | 126 | 0.965 |
| 127 | 127 | 0.415 |
| 128 | 128 | 0.0335 |
| 129 | 129 | 0.157 |
| 13 | 13 | 0.97 |
| 130 | 130 | 0.698 |
| 131 | 131 | 0.111 |
| 132 | 132 | 0.423 |
| 133 | 133 | 0.227 |
| 134 | 134 | 0.602 |
| 135 | 135 | 0.874 |
| 136 | 136 | 0.979 |
| 137 | 137 | 0.749 |
| 138 | 138 | 0.25 |
| 139 | 139 | 0.663 |
| 14 | 14 | 0.62 |
| 140 | 140 | 0.807 |
| 141 | 141 | 0.314 |
| 142 | 142 | 0.529 |
| 143 | 143 | 0.56 |
| 144 | 144 | 0.914 |
| 145 | 145 | 0.357 |
| 146 | 146 | 0.0133 |
| 147 | 147 | 0.136 |
| 148 | 148 | 0.155 |
| 149 | 149 | 0.414 |
| 15 | 15 | 0.763 |
| 150 | 150 | 0.182 |
| 151 | 151 | 0.695 |
| 152 | 152 | 0.0935 |
| 153 | 153 | 0.846 |
| 154 | 154 | 0.051 |
| 155 | 155 | 0.839 |
| 156 | 156 | 0.943 |
| 157 | 157 | 0.162 |
| 158 | 158 | 0.0634 |
| 159 | 159 | 0.402 |
| 16 | 16 | 0.299 |
| 160 | 160 | 0.244 |
| 161 | 161 | 0.903 |
| 162 | 162 | 0.0434 |
| 163 | 163 | 0.357 |
| 164 | 164 | 0.367 |
| 165 | 165 | 0.467 |
| 166 | 166 | 0.486 |
| 167 | 167 | 0.142 |
| 168 | 168 | 0.706 |
| 169 | 169 | 0.0988 |
| 17 | 17 | 0.177 |
| 18 | 18 | 0.0855 |
| 19 | 19 | 0.111 |
| 2 | 2 | 0.271 |
| 20 | 20 | 0.591 |
| 21 | 21 | 0.831 |
| 22 | 22 | 0.14 |
| 23 | 23 | 0.413 |
| 24 | 24 | 0.395 |
| 25 | 25 | 0.317 |
| 26 | 26 | 0.156 |
| 27 | 27 | 0.231 |
| 28 | 28 | 0.13 |
| 29 | 29 | 0.729 |
| 3 | 3 | 0.773 |
| 30 | 30 | 0.435 |
| 31 | 31 | 0.0915 |
| 32 | 32 | 0.124 |
| 33 | 33 | 0.816 |
| 34 | 34 | 0.269 |
| 35 | 35 | 0.71 |
| 36 | 36 | 0.323 |
| 37 | 37 | 0.573 |
| 38 | 38 | 0.707 |
| 39 | 39 | 0.454 |
| 4 | 4 | 0.524 |
| 40 | 40 | 0.159 |
| 41 | 41 | 0.817 |
| 42 | 42 | 0.293 |
| 43 | 43 | 0.45 |
| 44 | 44 | 0.777 |
| 45 | 45 | 0.333 |
| 46 | 46 | 0.373 |
| 47 | 47 | 0.684 |
| 48 | 48 | 0.946 |
| 49 | 49 | 0.51 |
| 5 | 5 | 0.769 |
| 50 | 50 | 0.541 |
| 51 | 51 | 0.439 |
| 52 | 52 | 0.266 |
| 53 | 53 | 0.366 |
| 54 | 54 | 0.675 |
| 55 | 55 | 0.078 |
| 56 | 56 | 0.932 |
| 57 | 57 | 0.181 |
| 58 | 58 | 0.252 |
| 59 | 59 | 0.0532 |
| 6 | 6 | 0.918 |
| 60 | 60 | 0.359 |
| 61 | 61 | 0.982 |
| 62 | 62 | 0.311 |
| 63 | 63 | 0.245 |
| 64 | 64 | 0.392 |
| 65 | 65 | 0.0321 |
| 66 | 66 | 0.287 |
| 67 | 67 | 0.616 |
| 68 | 68 | 0.819 |
| 69 | 69 | 0.383 |
| 7 | 7 | 0.667 |
| 70 | 70 | 0.356 |
| 71 | 71 | 0.722 |
| 72 | 72 | 0.617 |
| 73 | 73 | 0.0518 |
| 74 | 74 | 0.541 |
| 75 | 75 | 0.856 |
| 76 | 76 | 0.196 |
| 77 | 77 | 0.0602 |
| 78 | 78 | 0.174 |
| 79 | 79 | 0.72 |
| 8 | 8 | 0.0554 |
| 80 | 80 | 0.555 |
| 81 | 81 | 0.694 |
| 82 | 82 | 0.957 |
| 83 | 83 | 0.962 |
| 84 | 84 | 0.61 |
| 85 | 85 | 0.137 |
| 86 | 86 | 0.992 |
| 87 | 87 | 0.043 |
| 88 | 88 | 0.328 |
| 89 | 89 | 0.159 |
| 9 | 9 | 0.392 |
| 90 | 90 | 0.0944 |
| 91 | 91 | 0.808 |
| 92 | 92 | 0.462 |
| 93 | 93 | 0.509 |
| 94 | 94 | 0.994 |
| 95 | 95 | 0.585 |
| 96 | 96 | 0.713 |
| 97 | 97 | 0.424 |
| 98 | 98 | 0.41 |
| 99 | 99 | 0.0179 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12033
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000090 human light melanocyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000148 (melanocyte)
0002567 (light melanocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000090 (human light melanocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
