FF:12214-129D9: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=RNA-Seq@SAMD00013690 | ||
| | |accession_numbers=CAGE;DRX008057;DRR008929;DRZ000354;DRZ001739;DRZ011704;DRZ013089!RNA-Seq;DRX012346;DRR013794;DRZ002995; | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236 | |||
| | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.53!341.55!IRF8;;chr2:100759010..100759035,-!p1@AFF3!2.40!252.82!AFF3;;chr19:50922187..50922204,+!p1@SPIB!2.37!234.70!SPIB;;chr11:111249993..111250006,-!p1@POU2AF1!2.26!179.36!POU2AF1;;chr2:100759037..100759058,-!p2@AFF3!2.14!136.43!AFF3;;chr2:231090433..231090469,+!p1@SP140!2.10!124.03!SP140;;chr11:47400078..47400106,-!p1@SPI1!2.09!121.16!SPI1;;chr6:391743..391759,+!p1@IRF4!2.05!110.67!IRF4;;chr2:231090471..231090504,+!p2@SP140!1.97!91.59!SP140;;chr6:91006518..91006570,-!p1@BACH2!1.96!199.40!BACH2;;chr17:38020392..38020477,-!p1@IKZF3!1.93!84.91!IKZF3;;chr5:88178983..88179012,-!p1@MEF2C!1.80!457.95!MEF2C;;chr8:86099884..86099918,+!p4@E2F5!1.77!57.24!E2F5;;chr2:100758991..100759009,-!p3@AFF3!1.77!57.24!AFF3;;chr2:68592406..68592424,+!p1@PLEK!1.77!57.24!PLEK;;chr3:71355163..71355209,-!p5@FOXP1!1.74!73.46!FOXP1;;chr6:91006575..91006602,-!p2@BACH2!1.68!68.69!BACH2;;chr7:50344251..50344288,+!p3@IKZF1!1.68!46.75!IKZF1;;chr7:50343634..50343717,+!p2@IKZF1!1.65!43.89!IKZF1;;chr3:32023232..32023273,+!p1@ZNF860!1.61!56.29!ZNF860;;chr2:60780607..60780624,-!p2@BCL11A!1.56!103.99!BCL11A;;chr19:16435625..16435682,+!p1@KLF2!1.53!1011.30!KLF2;;chr17:38020557..38020572,-!p4@IKZF3!1.52!32.44!IKZF3;;chr8:86089627..86089653,+!p3@E2F5!1.46!31.48!E2F5;;chr19:13213662..13213686,-!p1@LYL1!1.43!38.16!LYL1;;chr2:60781201..60781258,-!p3@BCL11A!1.43!25.76!BCL11A;;chr18:52989031..52989079,-!p2@TCF4!1.42!58.20!TCF4;;chr2:60778035..60778060,-!p4@BCL11A!1.40!28.62!BCL11A;;chr17:38020516..38020544,-!p5@IKZF3!1.36!21.94!IKZF3;;chr5:158526756..158526797,-!p3@EBF1!1.36!21.94!EBF1;;chr7:50344289..50344323,+!p1@IKZF1!1.36!21.94!IKZF1;;chr4:57522513..57522548,-!p4@HOPX!1.34!20.99!HOPX;;chr13:41593425..41593480,-!p1@ELF1!1.32!122.12!ELF1;;chr5:88179017..88179046,-!p2@MEF2C!1.30!75.37!MEF2C;;chr1:25256756..25256774,-!p1@RUNX3!1.28!33.39!RUNX3;;chr20:56195474..56195506,-!p1@ZBP1!1.28!18.13!ZBP1;;chr4:185395633..185395651,-!p2@IRF2!1.26!27.67!IRF2;;chr2:68592394..68592405,+!p2@PLEK!1.26!17.17!PLEK;;chr8:86089531..86089544,+!p7@E2F5!1.26!17.17!E2F5;;chr17:37934204..37934241,-!p3@IKZF3!1.26!17.17!IKZF3;;chr19:42636586..42636607,-!p1@POU2F2!1.25!45.79!POU2F2;;chr4:185395590..185395627,-!p3@IRF2!1.25!20.99!IRF2;;chr10:94449703..94449718,+!p1@HHEX!1.24!62.97!HHEX;;chr3:71631151..71631194,-!p15@FOXP1!1.23!18.13!FOXP1;;chr20:50159198..50159299,-!p1@NFATC2!1.21!21.94!NFATC2;;chr2:100759060..100759073,-!p8@AFF3!1.21!15.26!AFF3;;chr14:69262947..69262986,-!p3@ZFP36L1!1.20!18.13!ZFP36L1;;chr3:71409904..71409927,-!p46@FOXP1!1.18!14.31!FOXP1;;chr7:77469439..77469459,+!p6@PHTF2!1.18!14.31!PHTF2;;chr11:128563948..128564003,+!p1@FLI1!1.16!161.24!FLI1;;chr1:151319654..151319698,-!p2@RFX5!1.16!29.58!RFX5;;chr7:50348268..50348366,+!p4@IKZF1!1.16!13.36!IKZF1;;chr7:63505799..63505904,+!p1@ZNF727!1.16!13.36!ZNF727;;chr9:37034186..37034216,-!p2@PAX5!1.16!13.36!PAX5;;chr19:13213704..13213726,-!p3@LYL1!1.14!17.17!LYL1;;chr8:81397846..81397860,+!p3@ZBTB10!1.14!16.22!ZBTB10;;chrX:101186981..101187030,-!p1@ZMAT1!1.13!41.02!ZMAT1;;chr19:36391434..36391450,-!p1@NFKBID!1.13!24.81!NFKBID;;chr16:85936412..85936431,+!p2@IRF8!1.13!12.40!IRF8;;chr17:38020607..38020621,-!p9@IKZF3!1.13!12.40!IKZF3;;chr2:100759076..100759088,-!p10@AFF3!1.13!12.40!AFF3;;chr2:231090344..231090361,-!p3@SP110!1.13!12.40!SP110;;chr2:61108695..61108753,+!p1@REL!1.12!83.96!REL;;chr19:58220517..58220583,-!p1@ZNF154!1.12!39.12!ZNF154;;chr3:18486354..18486377,-!p2@SATB1!1.12!15.26!SATB1;;chr7:64838786..64838809,+!p2@ZNF92!1.10!65.83!ZNF92;;chr6:91006503..91006517,-!p3@BACH2!1.10!11.45!BACH2;;chr3:18487057..18487105,-!p4@SATB1!1.10!11.45!SATB1;;chr9:37027156..37027193,-!p4@PAX5!1.10!11.45!PAX5;;chr14:75988771..75988826,+!p1@BATF!1.09!15.26!BATF;;chrX:106960221..106960236,-!p3@TSC22D3!1.08!30.53!TSC22D3;;chr9:37003148..37003152,-!p5@PAX5!1.06!10.49!PAX5;;chr5:88120151..88120177,-!p6@MEF2C!1.06!10.49!MEF2C;;chr14:64971288..64971316,-!p2@ZBTB25!1.03!30.53!ZBTB25;;chr19:19779619..19779670,+!p1@ZNF101!1.03!27.67!ZNF101;;chr4:81104895..81104920,+!p2@PRDM8!1.02!14.31!PRDM8;;chr10:94451574..94451587,+!p6@HHEX!1.02!9.54!HHEX;;chr21:36421535..36421610,-!p2@RUNX1!1.01!33.39!RUNX1;;chr7:77428066..77428132,+!p2@PHTF2!1.00!60.11!PHTF2;;chr19:45579725..45579743,-!p1@ZNF296!1.00!41.02!ZNF296;;chr19:11959532..11959593,+!p1@ZNF439!1.00!35.30!ZNF439;;chr10:94449675..94449694,+!p2@HHEX!1.00!24.81!HHEX;;chr1:10754477..10754517,-!p1@CASZ1!1.00!15.26!CASZ1;;chr16:3313791..3313834,+!p2@ZNF263!0.99!20.04!ZNF263;;chr19:20748574..20748599,-!p1@ZNF737!0.98!52.47!ZNF737;;chr18:52989001..52989030,-!p10@TCF4!0.98!9.54!TCF4;;chr17:56565257..56565283,-!p2@HSF5!0.98!8.59!HSF5;;chr7:50344144..50344157,+!p6@IKZF1!0.98!8.59!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!0.98!8.59!SPI1;;chr2:208394817..208394834,+!p3@CREB1!0.97!34.35!CREB1;;chr7:64126503..64126528,+!p1@ZNF107!0.96!59.15!ZNF107;;chr9:117150254..117150271,-!p1@AKNA!0.96!22.90!AKNA;;chr2:231280954..231280965,+!p2@SP100!0.96!15.26!SP100;;chr2:145277640..145277771,-!p1@ZEB2!0.95!110.67!ZEB2;;chr2:208031542..208031595,-!p2@KLF7!0.95!57.24!KLF7;;chrX:106960180..106960197,-!p2@TSC22D3!0.94!30.53!TSC22D3;;chr3:71630844..71630862,-!p40@FOXP1!0.94!7.63!FOXP1;;chr3:71631217..71631234,-!p33@FOXP1!0.94!7.63!FOXP1;;chr19:36204309..36204335,+!p1@ZBTB32!0.94!7.63!ZBTB32;;chr7:150102756..150102772,+!p5@ZNF775!0.94!7.63!ZNF775;;chr13:41593493..41593506,-!p8@ELF1!0.94!7.63!ELF1;;chrX:106960285..106960299,-!p1@TSC22D3!0.93!207.98!TSC22D3;;chr2:231084659..231084721,-!p1@SP110!0.92!178.41!SP110;;chr10:104154246..104154347,+!p3@NFKB2!0.92!46.75!NFKB2;;chr4:57522166..57522260,-!p2@HOPX!0.92!8.59!HOPX;;chr2:61108650..61108687,+!p2@REL!0.91!36.25!REL;;chr7:64126535..64126559,+!p2@ZNF107!0.90!15.26!ZNF107;;chrX:101187036..101187056,-!p2@ZMAT1!0.90!7.63!ZMAT1;;chrX:56258900..56258917,+!p4@KLF8!0.89!6.68!KLF8;;chr5:158526709..158526741,-!p7@EBF1!0.89!6.68!EBF1;;chr6:41701898..41701939,-!p5@TFEB!0.89!6.68!TFEB;;chr3:71353892..71353928,-!p31@FOXP1!0.89!6.68!FOXP1;;chr17:38020481..38020506,-!p7@IKZF3!0.89!6.68!IKZF3;;chr7:21467674..21467727,+!p1@SP4!0.88!27.67!SP4;;chr6:157098579..157098634,+!p4@ARID1B!0.88!15.26!ARID1B;;chr11:128392085..128392232,-!p1@ETS1!0.87!230.88!ETS1;;chr17:4981745..4981810,+!p1@ZFP3!0.87!33.39!ZFP3;;chr5:88179195..88179224,-!p3@MEF2C!0.87!10.49!MEF2C;;chr5:88179518..88179569,-!p5@MEF2C!0.87!8.59!MEF2C;;chrX:131623044..131623089,-!p1@MBNL3!0.85!26.71!MBNL3;;chr9:3525727..3525828,-!p2@RFX3!0.85!16.22!RFX3;;chrX:56258844..56258882,+!p1@KLF8!0.85!8.59!KLF8;;chr1:14026671..14026705,+!p2@PRDM2!0.84!38.16!PRDM2;;chr3:71179699..71179744,-!p2@FOXP1!0.83!45.79!FOXP1;;chr19:37997297..37997362,+!p3@ZNF793!0.83!9.54!ZNF793;;chr2:60781041..60781064,-!p13@BCL11A!0.83!5.72!BCL11A;;chr7:108209925..108209941,-!p2@THAP5!0.83!5.72!THAP5;;chr9:37034469..37034474,-!p1@PAX5!0.83!5.72!PAX5;;chr19:58694742..58694800,+!p2@ZNF274!0.81!23.85!ZNF274;;chr19:11877805..11877832,+!p2@ZNF441!0.81!9.54!ZNF441;;chrX:131624056..131624069,-!p2@MBNL3!0.81!7.63!MBNL3;;chr3:129158768..129158819,-!p1@MBD4!0.80!87.77!MBD4;;chr19:9546177..9546224,-!p1@ZNF266!0.80!41.02!ZNF266;;chr3:101546827..101546847,+!p2@NFKBIZ!0.80!7.63!NFKBIZ;;chr4:185395191..185395226,-!p4@IRF2!0.80!7.63!IRF2;;chr19:53289995..53290050,-!p1@ZNF600!0.79!22.90!ZNF600;;chr1:91487836..91487854,-!p3@ZNF644!0.79!12.40!ZNF644;;chr8:81397820..81397836,+!p2@ZBTB10!0.79!6.68!ZBTB10;;chr22:29196433..29196445,-!p4@XBP1!0.79!5.72!XBP1;;chr14:64971346..64971357,-!p9@ZBTB25!0.79!5.72!ZBTB25;;chr1:158979686..158979745,+!p1@IFI16!0.78!179.36!IFI16;;chr19:52956798..52956843,+!p1@ZNF578!0.78!10.49!ZNF578;;chr6:109804412..109804458,-!p1@ZBTB24!0.77!47.70!ZBTB24;;chr2:178128250..178128293,-!p6@NFE2L2!0.77!13.36!NFE2L2;;chr19:12512062..12512094,-!p1@ZNF799!0.77!10.49!ZNF799;;chr19:38085768..38085821,+!p1@ZNF540!0.77!7.63!ZNF540;;chr2:231191875..231191918,+!p1@SP140L!0.76!50.56!SP140L;;chr1:249132410..249132456,+!p1@ZNF672!0.76!39.12!ZNF672;;chr11:128392273..128392308,-!p2@ETS1!0.76!21.94!ETS1;;chr8:123793860..123793921,+!p2@ZHX2!0.76!14.31!ZHX2;;chr19:22235279..22235301,+!p1@ZNF257!0.76!9.54!ZNF257;;chr20:44600199..44600219,-!p3@ZNF335!0.76!6.68!ZNF335;;chr8:81397876..81397898,+!p5@ZBTB10!0.76!5.72!ZBTB10;;chr6:41700616..41700664,-!p8@TFEB!0.76!4.77!TFEB;;chr6:91006719..91006730,-!p5@BACH2!0.76!4.77!BACH2;;chr7:50343895..50343936,+!p5@IKZF1!0.76!4.77!IKZF1;;chr17:37934365..37934387,-!p2@IKZF3!0.76!4.77!IKZF3;;chr19:13213954..13214021,-!p4@LYL1!0.76!4.77!LYL1;;chr19:22193731..22193751,-!p1@ZNF208!0.76!4.77!ZNF208;;chr3:71631248..71631268,-!p26@FOXP1!0.76!4.77!FOXP1;;chr20:56195525..56195556,-!p2@ZBP1!0.76!4.77!ZBP1;;chr13:41240737..41240787,-!p1@FOXO1!0.75!61.06!FOXO1;;chr10:35416142..35416169,+!p3@CREM!0.75!13.36!CREM;;chr6:144385698..144385742,-!p2@PLAGL1!0.75!5.72!PLAGL1;;chr7:99156212..99156244,+!p3@ZNF655!0.74!19.08!ZNF655;;chr6:35227282..35227330,+!p2@ZNF76!0.74!18.13!ZNF76;;chr19:37709076..37709154,+!p1@ZNF383!0.74!16.22!ZNF383;;chr19:49140609..49140643,-!p1@DBP!0.73!27.67!DBP;;chr19:56632858..56632903,-!p2@ZNF787!0.73!11.45!ZNF787;;chrX:131622958..131622978,-!p3@MBNL3!0.73!5.72!MBNL3;;chr20:46130672..46130686,+!p2@NCOA3!0.72!20.99!NCOA3;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.71!30.53!ZNF580;;chr19:11877838..11877915,+!p1@ZNF441!0.71!14.31!ZNF441;;chr6:106534230..106534254,+!p2@PRDM1!0.71!11.45!PRDM1;;chr2:208030886..208030917,-!p4@KLF7!0.71!8.59!KLF7;;chr2:61108771..61108789,+!p4@REL!0.71!6.68!REL;;chr19:53466067..53466087,-!p3@ZNF321P,p3@ZNF816-ZNF321P,p3@ZNF816!0.71!6.68!ZNF816;;chr12:54785054..54785072,-!p4@ZNF385A!0.71!4.77!ZNF385A;;chr13:41240717..41240735,-!p2@FOXO1!0.70!30.53!FOXO1;;chr10:104155480..104155534,+!p2@NFKB2!0.70!29.58!NFKB2;;chr19:19976683..19976709,+!p1@ZNF253!0.70!20.04!ZNF253;;chr19:38270215..38270251,-!p1@ZNF573!0.70!18.13!ZNF573;;chr15:67357992..67358009,+!p3@SMAD3!0.70!10.49!SMAD3;;chrX:106960249..106960260,-!p5@TSC22D3!0.70!6.68!TSC22D3;;chr7:128577972..128578047,+!p1@IRF5!0.70!6.68!IRF5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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000236;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 41: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|top_motifs= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12188.12214-129D9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12188.12214-129D9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12188.12214-129D9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12188.12214-129D9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12188.12214-129D9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12214-129D9 | |||
|is_a=EFO:0002091;;FF:0000025;;FF:0000210 | |||
|is_obsolete= | |||
|library_id=CNhs12188!RDhi10012 | |||
|library_id_phase_based=2:CNhs12188 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12214 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12214 | |||
|name=CD19+ B Cells (pluriselect), donor090612, donation3 | |||
|namespace=FANTOM5 | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs12188,LSID975,release011,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,1.09512208416994,0,0,0,0,0,0.130618476572201,0.290936506658587,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0.290936506658587,0,0,0,-0.153323010348428,0,0,0,0,0.586830403682648,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.001569294148453,0,0,0,0,0,0,0,0,0.121253232216459,0,0,0,0,0,-0.0499632213353613,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0.290936506658587,0.145468253329294,0,0.290936506658587,0,0,0,0,0,0,0,0,0,-0.0718919953399513,-0.0558962146341652,0.145468253329294,0,0,-0.19754541390633,-0.211197402695869,0,0,0,0,0.192901155420881,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0490946594068325,0,0,0,-0.21690115973835,-0.515941163000735,0,0,0,0,0,0 | |||
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| |||
|rna_box=129 | |||
|rna_catalog_number= | |||
|rna_concentration=0.05296 | |||
|rna_extraction_protocol= | |||
|rna_lot_number= | |||
|rna_od260/230=1.54 | |||
|rna_od260/280=1.94 | |||
|rna_position=D9 | |||
|rna_rin= | |||
|rna_sample_type= | |||
|rna_tube_id=129D9 | |||
|rna_weight_ug=1.42992 | |||
|sample_age= | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot=090612-04 | |||
|sample_cell_type=b cell | |||
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.03465370575265e-221!GO:0043227;membrane-bound organelle;2.02552481172533e-203!GO:0043231;intracellular membrane-bound organelle;4.50167811428871e-203!GO:0043226;organelle;2.00453656882828e-189!GO:0043229;intracellular organelle;5.68013305320223e-189!GO:0005737;cytoplasm;5.66272762587421e-129!GO:0044422;organelle part;3.19725721894308e-117!GO:0044446;intracellular organelle part;1.81911666423935e-115!GO:0032991;macromolecular complex;9.13328580248945e-102!GO:0005634;nucleus;1.2136176783351e-101!GO:0044444;cytoplasmic part;9.5623061671448e-101!GO:0044237;cellular metabolic process;4.09275952145661e-94!GO:0043170;macromolecule metabolic process;7.55074870070694e-94!GO:0044238;primary metabolic process;7.59075366168596e-90!GO:0030529;ribonucleoprotein complex;1.64495607367873e-88!GO:0003723;RNA binding;3.20029002355166e-81!GO:0044428;nuclear part;2.93859874197175e-76!GO:0043233;organelle lumen;7.20999334564262e-70!GO:0031974;membrane-enclosed lumen;7.20999334564262e-70!GO:0010467;gene expression;3.1691315691717e-66!GO:0043283;biopolymer metabolic process;3.42590104610465e-64!GO:0005739;mitochondrion;9.39604074133966e-61!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.67135406644882e-60!GO:0006396;RNA processing;1.39843725199885e-56!GO:0006412;translation;3.26848707210168e-53!GO:0043234;protein complex;1.32590454113387e-50!GO:0005840;ribosome;7.49788736417198e-50!GO:0031981;nuclear lumen;7.42815949363611e-47!GO:0005515;protein binding;1.93654632531238e-45!GO:0003676;nucleic acid binding;5.9600457829463e-45!GO:0016071;mRNA metabolic process;6.58699285683056e-45!GO:0033036;macromolecule localization;3.39957234598535e-44!GO:0015031;protein transport;7.20500411923338e-44!GO:0003735;structural constituent of ribosome;4.68973244465561e-43!GO:0019538;protein metabolic process;2.15852172340195e-42!GO:0044429;mitochondrial part;1.85753643009858e-41!GO:0045184;establishment of protein localization;2.17070876991066e-41!GO:0008380;RNA splicing;4.23997026584384e-41!GO:0008104;protein localization;1.00598979795984e-40!GO:0044267;cellular protein metabolic process;8.27769782523697e-40!GO:0044260;cellular macromolecule metabolic process;5.55997626738095e-39!GO:0033279;ribosomal subunit;6.50291186576672e-39!GO:0009059;macromolecule biosynthetic process;1.17981748646719e-38!GO:0006397;mRNA processing;2.67126132768997e-38!GO:0031090;organelle membrane;1.23027886403508e-37!GO:0031967;organelle envelope;1.57014583495692e-36!GO:0031975;envelope;3.27055134284978e-36!GO:0016070;RNA metabolic process;3.73714235459702e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.02477075126228e-32!GO:0005829;cytosol;2.14040345037176e-32!GO:0044249;cellular biosynthetic process;2.80470710726067e-31!GO:0005654;nucleoplasm;1.13227885464559e-30!GO:0009058;biosynthetic process;1.94021036796773e-30!GO:0065003;macromolecular complex assembly;4.01599530503003e-30!GO:0005681;spliceosome;7.39950758572492e-30!GO:0006259;DNA metabolic process;3.70863697383173e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.35699921881874e-29!GO:0046907;intracellular transport;2.06745762273303e-28!GO:0006886;intracellular protein transport;1.08878140175148e-26!GO:0022607;cellular component assembly;2.11974290845055e-26!GO:0044445;cytosolic part;2.56323628053346e-26!GO:0016043;cellular component organization and biogenesis;2.74066119586527e-26!GO:0005740;mitochondrial envelope;5.37209087867136e-25!GO:0019866;organelle inner membrane;7.99557674872908e-25!GO:0044451;nucleoplasm part;3.83044232496685e-24!GO:0031966;mitochondrial membrane;1.3460872241575e-23!GO:0005743;mitochondrial inner membrane;6.07331407035071e-23!GO:0006996;organelle organization and biogenesis;7.76964798652193e-23!GO:0006119;oxidative phosphorylation;3.16725169769742e-21!GO:0022618;protein-RNA complex assembly;8.78419210322827e-21!GO:0006512;ubiquitin cycle;3.01861281171773e-20!GO:0000166;nucleotide binding;3.201633816962e-20!GO:0015935;small ribosomal subunit;3.83078195005391e-20!GO:0044455;mitochondrial membrane part;8.32301098460832e-20!GO:0015934;large ribosomal subunit;8.49307156966974e-20!GO:0043228;non-membrane-bound organelle;1.02090660632494e-19!GO:0043232;intracellular non-membrane-bound organelle;1.02090660632494e-19!GO:0031980;mitochondrial lumen;3.31050300281932e-19!GO:0005759;mitochondrial matrix;3.31050300281932e-19!GO:0051649;establishment of cellular localization;4.02400629421205e-19!GO:0051641;cellular localization;6.30894458378957e-19!GO:0016874;ligase activity;1.94578274761018e-18!GO:0044265;cellular macromolecule catabolic process;2.55284885589878e-18!GO:0016604;nuclear body;3.72532213074464e-18!GO:0005730;nucleolus;4.30641981046966e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.38019061322174e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.58682207597169e-17!GO:0008134;transcription factor binding;1.93154849140893e-17!GO:0019941;modification-dependent protein catabolic process;1.99032529327094e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.99032529327094e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.04694263239186e-17!GO:0016462;pyrophosphatase activity;2.07826663538706e-17!GO:0017111;nucleoside-triphosphatase activity;2.39982762361288e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.34607994929336e-17!GO:0044257;cellular protein catabolic process;3.6399400525389e-17!GO:0043285;biopolymer catabolic process;8.50312748159548e-17!GO:0006974;response to DNA damage stimulus;1.62418037071835e-16!GO:0005746;mitochondrial respiratory chain;3.25110280749786e-16!GO:0006457;protein folding;5.225819813223e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;2.54508187811596e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.64661907876994e-15!GO:0008135;translation factor activity, nucleic acid binding;3.56787883738753e-15!GO:0006605;protein targeting;4.02108714040583e-15!GO:0012501;programmed cell death;4.03584584662959e-15!GO:0006915;apoptosis;4.63830185047242e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.36722398382075e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.30555302903227e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;8.97998251075848e-15!GO:0000375;RNA splicing, via transesterification reactions;8.97998251075848e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.97998251075848e-15!GO:0051276;chromosome organization and biogenesis;9.7486658287852e-15!GO:0009057;macromolecule catabolic process;9.98759105965289e-15!GO:0006323;DNA packaging;1.23898895472561e-14!GO:0043412;biopolymer modification;1.4484063012557e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.49957055149093e-14!GO:0003954;NADH dehydrogenase activity;2.49957055149093e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.49957055149093e-14!GO:0016607;nuclear speck;4.12887979934077e-14!GO:0006281;DNA repair;4.25183524667953e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.1351348451612e-14!GO:0005761;mitochondrial ribosome;6.79743967409539e-14!GO:0000313;organellar ribosome;6.79743967409539e-14!GO:0032553;ribonucleotide binding;8.1533595191713e-14!GO:0032555;purine ribonucleotide binding;8.1533595191713e-14!GO:0017076;purine nucleotide binding;1.61032856826473e-13!GO:0012505;endomembrane system;1.76425185469277e-13!GO:0008219;cell death;2.67213172194729e-13!GO:0016265;death;2.67213172194729e-13!GO:0005694;chromosome;3.35644419131563e-13!GO:0019222;regulation of metabolic process;4.44233215165516e-13!GO:0006413;translational initiation;5.2905576755537e-13!GO:0044248;cellular catabolic process;5.41845993054839e-13!GO:0016887;ATPase activity;6.66000849684093e-13!GO:0042254;ribosome biogenesis and assembly;7.12504424803645e-13!GO:0050794;regulation of cellular process;7.70493990865414e-13!GO:0042775;organelle ATP synthesis coupled electron transport;9.51654831543316e-13!GO:0042773;ATP synthesis coupled electron transport;9.51654831543316e-13!GO:0030163;protein catabolic process;1.31805831443539e-12!GO:0042623;ATPase activity, coupled;1.64616410891467e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.84629853612194e-12!GO:0045271;respiratory chain complex I;1.84629853612194e-12!GO:0005747;mitochondrial respiratory chain complex I;1.84629853612194e-12!GO:0005524;ATP binding;2.45100278849604e-12!GO:0005635;nuclear envelope;4.34117735259437e-12!GO:0006464;protein modification process;5.01047455256753e-12!GO:0003712;transcription cofactor activity;5.28246673771138e-12!GO:0006446;regulation of translational initiation;5.28246673771138e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.98744359536584e-12!GO:0007049;cell cycle;6.22236810787306e-12!GO:0032559;adenyl ribonucleotide binding;8.46331816776573e-12!GO:0003743;translation initiation factor activity;8.96225452346977e-12!GO:0031965;nuclear membrane;9.36439464086724e-12!GO:0030554;adenyl nucleotide binding;2.19497144301063e-11!GO:0044427;chromosomal part;2.35934890052877e-11!GO:0031323;regulation of cellular metabolic process;2.40237565325018e-11!GO:0008639;small protein conjugating enzyme activity;3.14192610115286e-11!GO:0051082;unfolded protein binding;3.50574433039313e-11!GO:0006913;nucleocytoplasmic transport;5.13555027977795e-11!GO:0006333;chromatin assembly or disassembly;5.16904779395039e-11!GO:0004842;ubiquitin-protein ligase activity;6.2740453771999e-11!GO:0043687;post-translational protein modification;8.04964976659568e-11!GO:0051169;nuclear transport;8.26529794574192e-11!GO:0004386;helicase activity;8.75016038282634e-11!GO:0016568;chromatin modification;1.11052441881784e-10!GO:0009719;response to endogenous stimulus;1.63810974445994e-10!GO:0019787;small conjugating protein ligase activity;1.7143158680388e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.22770252855333e-10!GO:0006399;tRNA metabolic process;4.64170193533417e-10!GO:0042981;regulation of apoptosis;6.50469406066102e-10!GO:0006350;transcription;6.68821635946045e-10!GO:0051186;cofactor metabolic process;8.18118366795717e-10!GO:0043067;regulation of programmed cell death;8.28729011454978e-10!GO:0044453;nuclear membrane part;8.68506662539815e-10!GO:0048770;pigment granule;1.00249737778291e-09!GO:0042470;melanosome;1.00249737778291e-09!GO:0015078;hydrogen ion transmembrane transporter activity;2.29541510647625e-09!GO:0048193;Golgi vesicle transport;2.41813165739698e-09!GO:0008026;ATP-dependent helicase activity;2.4363309578709e-09!GO:0010468;regulation of gene expression;2.45582422429359e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.48278401931017e-09!GO:0019829;cation-transporting ATPase activity;3.02079478657718e-09!GO:0005783;endoplasmic reticulum;3.09105602317818e-09!GO:0065004;protein-DNA complex assembly;3.8736304938253e-09!GO:0006403;RNA localization;4.12502404703378e-09!GO:0017038;protein import;4.35871168430606e-09!GO:0043566;structure-specific DNA binding;4.63910923111873e-09!GO:0050657;nucleic acid transport;4.72940794394443e-09!GO:0051236;establishment of RNA localization;4.72940794394443e-09!GO:0050658;RNA transport;4.72940794394443e-09!GO:0009259;ribonucleotide metabolic process;4.80395539209376e-09!GO:0005643;nuclear pore;4.84252290126442e-09!GO:0022402;cell cycle process;5.78269588648267e-09!GO:0016072;rRNA metabolic process;6.16067042293199e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.98994783351879e-09!GO:0005794;Golgi apparatus;7.45668218102947e-09!GO:0065002;intracellular protein transport across a membrane;7.74452962124137e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.89260745205488e-09!GO:0006364;rRNA processing;8.84824204321714e-09!GO:0009260;ribonucleotide biosynthetic process;1.04020000238495e-08!GO:0000785;chromatin;1.08154940812331e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.08403386178651e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.16101326852352e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.35372379425961e-08!GO:0006164;purine nucleotide biosynthetic process;1.40474870322324e-08!GO:0006163;purine nucleotide metabolic process;1.69452395769898e-08!GO:0016881;acid-amino acid ligase activity;1.72088871526245e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.78320154104707e-08!GO:0003713;transcription coactivator activity;2.04537716090952e-08!GO:0008270;zinc ion binding;2.40067019290412e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.72974371391047e-08!GO:0050789;regulation of biological process;2.73179655270429e-08!GO:0051726;regulation of cell cycle;3.03073235158507e-08!GO:0008565;protein transporter activity;3.23972439960106e-08!GO:0044432;endoplasmic reticulum part;3.46171471534017e-08!GO:0009150;purine ribonucleotide metabolic process;3.49243185485805e-08!GO:0000074;regulation of progression through cell cycle;4.05802144988916e-08!GO:0004298;threonine endopeptidase activity;5.52094561060289e-08!GO:0015986;ATP synthesis coupled proton transport;5.71761745681022e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.71761745681022e-08!GO:0006732;coenzyme metabolic process;6.82534384849862e-08!GO:0046930;pore complex;1.15177978487302e-07!GO:0051028;mRNA transport;1.28201019860504e-07!GO:0051246;regulation of protein metabolic process;1.36855716841159e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.45050940167576e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.96255878144952e-07!GO:0000245;spliceosome assembly;2.13845345556782e-07!GO:0003697;single-stranded DNA binding;2.17079882729422e-07!GO:0016787;hydrolase activity;2.17097044660773e-07!GO:0016192;vesicle-mediated transport;2.49293218228351e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.53694205305033e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.97511454463982e-07!GO:0032774;RNA biosynthetic process;3.27395428556688e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.36395720748122e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.36395720748122e-07!GO:0005768;endosome;3.69784603930197e-07!GO:0006754;ATP biosynthetic process;3.84629276437158e-07!GO:0006753;nucleoside phosphate metabolic process;3.84629276437158e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.84629276437158e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.84629276437158e-07!GO:0006351;transcription, DNA-dependent;4.11641446564872e-07!GO:0045449;regulation of transcription;4.34934225671316e-07!GO:0032446;protein modification by small protein conjugation;4.61432152844382e-07!GO:0000151;ubiquitin ligase complex;5.90401579360238e-07!GO:0009055;electron carrier activity;7.75965505115218e-07!GO:0031497;chromatin assembly;7.83006654413444e-07!GO:0009199;ribonucleoside triphosphate metabolic process;9.13862482600371e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.35814626445881e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.38640270703791e-07!GO:0004812;aminoacyl-tRNA ligase activity;9.38640270703791e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.38640270703791e-07!GO:0006793;phosphorus metabolic process;9.70456056631959e-07!GO:0006796;phosphate metabolic process;9.70456056631959e-07!GO:0016567;protein ubiquitination;9.90751655244957e-07!GO:0009141;nucleoside triphosphate metabolic process;1.0076721385725e-06!GO:0006334;nucleosome assembly;1.04941472301501e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.05182383993253e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.05182383993253e-06!GO:0006461;protein complex assembly;1.06594125516331e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.06746434599796e-06!GO:0006366;transcription from RNA polymerase II promoter;1.09176513923701e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.17943917338809e-06!GO:0005789;endoplasmic reticulum membrane;1.17943917338809e-06!GO:0046914;transition metal ion binding;1.1915814001e-06!GO:0009056;catabolic process;1.26667751979025e-06!GO:0009060;aerobic respiration;1.35456554506668e-06!GO:0045259;proton-transporting ATP synthase complex;1.45557872145785e-06!GO:0046034;ATP metabolic process;1.74818274668092e-06!GO:0016310;phosphorylation;1.88021412184561e-06!GO:0016779;nucleotidyltransferase activity;1.91281009600254e-06!GO:0016564;transcription repressor activity;2.01985779736174e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.01985779736174e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.14574399687161e-06!GO:0043038;amino acid activation;2.16050732393877e-06!GO:0006418;tRNA aminoacylation for protein translation;2.16050732393877e-06!GO:0043039;tRNA aminoacylation;2.16050732393877e-06!GO:0006260;DNA replication;2.48399318612142e-06!GO:0005770;late endosome;2.63344418071394e-06!GO:0031324;negative regulation of cellular metabolic process;2.91714354363054e-06!GO:0019899;enzyme binding;4.13899970980945e-06!GO:0009615;response to virus;4.34147479145647e-06!GO:0045333;cellular respiration;4.57782657136633e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.77304898115812e-06!GO:0005793;ER-Golgi intermediate compartment;8.19670034903082e-06!GO:0006401;RNA catabolic process;8.80321318869648e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.82269497536551e-06!GO:0016563;transcription activator activity;8.82269497536551e-06!GO:0051188;cofactor biosynthetic process;9.0738254166421e-06!GO:0006613;cotranslational protein targeting to membrane;9.22914359516643e-06!GO:0043069;negative regulation of programmed cell death;9.90330526011756e-06!GO:0045786;negative regulation of progression through cell cycle;1.02171689037038e-05!GO:0051170;nuclear import;1.13435325228242e-05!GO:0006355;regulation of transcription, DNA-dependent;1.36663968883476e-05!GO:0003677;DNA binding;1.38464370661266e-05!GO:0007243;protein kinase cascade;1.49780973429261e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.55304915799113e-05!GO:0015399;primary active transmembrane transporter activity;1.55304915799113e-05!GO:0043066;negative regulation of apoptosis;1.57197557241701e-05!GO:0006099;tricarboxylic acid cycle;1.66291596293819e-05!GO:0046356;acetyl-CoA catabolic process;1.66291596293819e-05!GO:0007005;mitochondrion organization and biogenesis;1.87112172273909e-05!GO:0006606;protein import into nucleus;1.94142414443535e-05!GO:0003724;RNA helicase activity;2.23108948283476e-05!GO:0065007;biological regulation;2.30713005625235e-05!GO:0000278;mitotic cell cycle;2.37541537964022e-05!GO:0006084;acetyl-CoA metabolic process;2.40116770426391e-05!GO:0016481;negative regulation of transcription;2.45899493745644e-05!GO:0009117;nucleotide metabolic process;3.14347769718613e-05!GO:0005773;vacuole;3.29571264438857e-05!GO:0006417;regulation of translation;3.49309104058528e-05!GO:0003690;double-stranded DNA binding;3.63723659442003e-05!GO:0044440;endosomal part;3.81099159431227e-05!GO:0010008;endosome membrane;3.81099159431227e-05!GO:0065009;regulation of a molecular function;4.04721311483689e-05!GO:0042613;MHC class II protein complex;4.5972557088097e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.63545107344843e-05!GO:0005762;mitochondrial large ribosomal subunit;5.11227646961016e-05!GO:0000315;organellar large ribosomal subunit;5.11227646961016e-05!GO:0009108;coenzyme biosynthetic process;5.2274288380232e-05!GO:0048523;negative regulation of cellular process;5.27232770681269e-05!GO:0000323;lytic vacuole;5.72021246205411e-05!GO:0005764;lysosome;5.72021246205411e-05!GO:0043065;positive regulation of apoptosis;6.24236650376188e-05!GO:0051168;nuclear export;6.28188091711594e-05!GO:0006752;group transfer coenzyme metabolic process;6.70924875178256e-05!GO:0030120;vesicle coat;7.3177767007792e-05!GO:0030662;coated vesicle membrane;7.3177767007792e-05!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;7.55948975085251e-05!GO:0031072;heat shock protein binding;8.11748346927302e-05!GO:0006612;protein targeting to membrane;8.55068199787991e-05!GO:0048475;coated membrane;8.69456166930521e-05!GO:0030117;membrane coat;8.69456166930521e-05!GO:0043068;positive regulation of programmed cell death;8.98256252084549e-05!GO:0006916;anti-apoptosis;9.29256764288381e-05!GO:0000314;organellar small ribosomal subunit;9.73134191771472e-05!GO:0005763;mitochondrial small ribosomal subunit;9.73134191771472e-05!GO:0009109;coenzyme catabolic process;9.91357062611856e-05!GO:0006402;mRNA catabolic process;0.000111185636461575!GO:0009892;negative regulation of metabolic process;0.000111688173087241!GO:0005813;centrosome;0.00011326754656423!GO:0006917;induction of apoptosis;0.000113797303933853!GO:0003924;GTPase activity;0.000114612457664252!GO:0008033;tRNA processing;0.000119849178775084!GO:0003714;transcription corepressor activity;0.00012194334917327!GO:0016740;transferase activity;0.000125629426489316!GO:0016197;endosome transport;0.000125795310082764!GO:0051187;cofactor catabolic process;0.00013239043070327!GO:0012502;induction of programmed cell death;0.000161005751858811!GO:0000786;nucleosome;0.000165334398644509!GO:0043492;ATPase activity, coupled to movement of substances;0.000174742623904102!GO:0003899;DNA-directed RNA polymerase activity;0.000181832325092197!GO:0043681;protein import into mitochondrion;0.000193470721409868!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000200102754329726!GO:0005885;Arp2/3 protein complex;0.000209856251880087!GO:0006261;DNA-dependent DNA replication;0.000234855472390424!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000235788632531117!GO:0008168;methyltransferase activity;0.000267654876639158!GO:0016741;transferase activity, transferring one-carbon groups;0.000267654876639158!GO:0043021;ribonucleoprotein binding;0.000267654876639158!GO:0044431;Golgi apparatus part;0.000271580220102848!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000343949219091575!GO:0006818;hydrogen transport;0.000347719976092644!GO:0022890;inorganic cation transmembrane transporter activity;0.000366810851631858!GO:0015992;proton transport;0.000383691163643121!GO:0008632;apoptotic program;0.000387079761850663!GO:0051301;cell division;0.000395174290397568!GO:0005815;microtubule organizing center;0.000408764659963705!GO:0031326;regulation of cellular biosynthetic process;0.000425482895453012!GO:0005667;transcription factor complex;0.000490159320354733!GO:0005525;GTP binding;0.000490159320354733!GO:0008186;RNA-dependent ATPase activity;0.00050434309511667!GO:0003729;mRNA binding;0.000540290300667522!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000563516351319426!GO:0000087;M phase of mitotic cell cycle;0.000581528406802499!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00060863861152323!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000610294460249553!GO:0031902;late endosome membrane;0.00062469517609392!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000726476462557624!GO:0022403;cell cycle phase;0.000771556592512863!GO:0048519;negative regulation of biological process;0.00078801907180606!GO:0007067;mitosis;0.000803568127907175!GO:0030384;phosphoinositide metabolic process;0.000866350331288046!GO:0008654;phospholipid biosynthetic process;0.000871208050781343!GO:0004518;nuclease activity;0.000903256567447557!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00103770243228579!GO:0044452;nucleolar part;0.0011945292969747!GO:0051252;regulation of RNA metabolic process;0.00124393078798756!GO:0016363;nuclear matrix;0.00124557966470942!GO:0008234;cysteine-type peptidase activity;0.00124557966470942!GO:0007006;mitochondrial membrane organization and biogenesis;0.00124647184041732!GO:0051427;hormone receptor binding;0.00136038711872591!GO:0043623;cellular protein complex assembly;0.00136958414206417!GO:0004004;ATP-dependent RNA helicase activity;0.00146889849071006!GO:0006383;transcription from RNA polymerase III promoter;0.00147373551873899!GO:0006310;DNA recombination;0.00148696321913605!GO:0003725;double-stranded RNA binding;0.00155181836613566!GO:0043488;regulation of mRNA stability;0.00156374520018264!GO:0043487;regulation of RNA stability;0.00156374520018264!GO:0042113;B cell activation;0.00159318660959415!GO:0016251;general RNA polymerase II transcription factor activity;0.00161577775448828!GO:0006950;response to stress;0.00169232893262109!GO:0009165;nucleotide biosynthetic process;0.00180259995329038!GO:0009889;regulation of biosynthetic process;0.00190739594128974!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00202148560839467!GO:0015002;heme-copper terminal oxidase activity;0.00202148560839467!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00202148560839467!GO:0004129;cytochrome-c oxidase activity;0.00202148560839467!GO:0006352;transcription initiation;0.00210192704635618!GO:0048500;signal recognition particle;0.00211362746022292!GO:0045454;cell redox homeostasis;0.00211621591177542!GO:0004527;exonuclease activity;0.00223400058675029!GO:0009967;positive regulation of signal transduction;0.00228196790692687!GO:0005684;U2-dependent spliceosome;0.00232945168874933!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00236711093307752!GO:0046489;phosphoinositide biosynthetic process;0.00244926782984081!GO:0005048;signal sequence binding;0.00245479488728246!GO:0045892;negative regulation of transcription, DNA-dependent;0.00246948879778515!GO:0035257;nuclear hormone receptor binding;0.00247427200042063!GO:0007034;vacuolar transport;0.00247427200042063!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00247427200042063!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00247427200042063!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00247427200042063!GO:0051789;response to protein stimulus;0.00247427200042063!GO:0006986;response to unfolded protein;0.00247427200042063!GO:0006626;protein targeting to mitochondrion;0.0024856239833579!GO:0003711;transcription elongation regulator activity;0.00260229969377663!GO:0006891;intra-Golgi vesicle-mediated transport;0.00270384407013937!GO:0048471;perinuclear region of cytoplasm;0.00278693545512146!GO:0051087;chaperone binding;0.00281666979211871!GO:0005769;early endosome;0.00285062887413025!GO:0047485;protein N-terminus binding;0.00293561111314326!GO:0033116;ER-Golgi intermediate compartment membrane;0.00293646952630277!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00308290507690842!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00308290507690842!GO:0005657;replication fork;0.00309007698406248!GO:0006302;double-strand break repair;0.00315491738968878!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00326021764541652!GO:0016859;cis-trans isomerase activity;0.00328007547089954!GO:0046474;glycerophospholipid biosynthetic process;0.00332235469746574!GO:0005774;vacuolar membrane;0.00333798237746395!GO:0006650;glycerophospholipid metabolic process;0.00379084822915886!GO:0031252;leading edge;0.00383220745989265!GO:0032561;guanyl ribonucleotide binding;0.00385408897564928!GO:0019001;guanyl nucleotide binding;0.00385408897564928!GO:0050790;regulation of catalytic activity;0.00389972552237417!GO:0007264;small GTPase mediated signal transduction;0.00390963054523659!GO:0008312;7S RNA binding;0.00408087719561293!GO:0016605;PML body;0.00418787962459468!GO:0006414;translational elongation;0.00437912733996366!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00441358435090128!GO:0051920;peroxiredoxin activity;0.00447889701397345!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0045144306995743!GO:0045047;protein targeting to ER;0.0045144306995743!GO:0042802;identical protein binding;0.00486411500517298!GO:0016853;isomerase activity;0.0051829912617658!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00519196793638933!GO:0032259;methylation;0.0053589463569406!GO:0016584;nucleosome positioning;0.00548263914932337!GO:0007242;intracellular signaling cascade;0.00550407221090824!GO:0000139;Golgi membrane;0.00556532130491644!GO:0004674;protein serine/threonine kinase activity;0.00565578683020457!GO:0008408;3'-5' exonuclease activity;0.00582731657444836!GO:0045947;negative regulation of translational initiation;0.00596736002390267!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00630115147068142!GO:0006405;RNA export from nucleus;0.0064779510586778!GO:0004532;exoribonuclease activity;0.00663649385591639!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00663649385591639!GO:0000279;M phase;0.00668614023394716!GO:0044437;vacuolar part;0.00670869857927331!GO:0006611;protein export from nucleus;0.00674871811061674!GO:0005765;lysosomal membrane;0.00707478984284417!GO:0030433;ER-associated protein catabolic process;0.00714255164656077!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00714255164656077!GO:0005798;Golgi-associated vesicle;0.00737891532937957!GO:0006289;nucleotide-excision repair;0.00761782333216827!GO:0006091;generation of precursor metabolites and energy;0.00764591650059834!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00772505831280186!GO:0043414;biopolymer methylation;0.00779031491802097!GO:0009451;RNA modification;0.00785175845230714!GO:0003684;damaged DNA binding;0.00832616085630886!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00864423161862496!GO:0030518;steroid hormone receptor signaling pathway;0.00870235929888454!GO:0005637;nuclear inner membrane;0.00920239964180616!GO:0006839;mitochondrial transport;0.00923522792233372!GO:0005669;transcription factor TFIID complex;0.00938018402220391!GO:0005741;mitochondrial outer membrane;0.00938018402220391!GO:0000118;histone deacetylase complex;0.00947872031047581!GO:0015631;tubulin binding;0.00960987181909475!GO:0051539;4 iron, 4 sulfur cluster binding;0.00964526775738981!GO:0019882;antigen processing and presentation;0.00977656923472139!GO:0030880;RNA polymerase complex;0.00986719001895521!GO:0018193;peptidyl-amino acid modification;0.0104430755259978!GO:0030258;lipid modification;0.0106508877909116!GO:0031625;ubiquitin protein ligase binding;0.01163004276043!GO:0016272;prefoldin complex;0.0118893321828901!GO:0006376;mRNA splice site selection;0.0119243114793671!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0119243114793671!GO:0046966;thyroid hormone receptor binding;0.0122192045303211!GO:0007265;Ras protein signal transduction;0.0124887417244599!GO:0030521;androgen receptor signaling pathway;0.012569139822193!GO:0006607;NLS-bearing substrate import into nucleus;0.0127567920537708!GO:0031901;early endosome membrane;0.013192488078044!GO:0000049;tRNA binding;0.0134272994012331!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0142505212071754!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0153666430489775!GO:0004197;cysteine-type endopeptidase activity;0.015436770954842!GO:0003746;translation elongation factor activity;0.0155680915057867!GO:0031968;organelle outer membrane;0.0157596961010058!GO:0007050;cell cycle arrest;0.0169517547398286!GO:0046467;membrane lipid biosynthetic process;0.017046203725153!GO:0005869;dynactin complex;0.0171845969822708!GO:0019867;outer membrane;0.0173571918446973!GO:0043022;ribosome binding;0.0176096503022096!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0177426618870015!GO:0007041;lysosomal transport;0.0178085450704765!GO:0051540;metal cluster binding;0.0178085450704765!GO:0051536;iron-sulfur cluster binding;0.0178085450704765!GO:0048487;beta-tubulin binding;0.0178158180829213!GO:0006919;caspase activation;0.0179087347893168!GO:0048522;positive regulation of cellular process;0.0179976411961976!GO:0015980;energy derivation by oxidation of organic compounds;0.0181503424811156!GO:0019883;antigen processing and presentation of endogenous antigen;0.0181986275252854!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.019029521715929!GO:0000178;exosome (RNase complex);0.0193508511743811!GO:0030658;transport vesicle membrane;0.019409349279757!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0194408755262558!GO:0000428;DNA-directed RNA polymerase complex;0.0194408755262558!GO:0006284;base-excision repair;0.0201369842232725!GO:0032395;MHC class II receptor activity;0.0202592375084751!GO:0032200;telomere organization and biogenesis;0.0203362887986973!GO:0000723;telomere maintenance;0.0203362887986973!GO:0015630;microtubule cytoskeleton;0.021060754154335!GO:0000209;protein polyubiquitination;0.0211087325177777!GO:0002764;immune response-regulating signal transduction;0.0213115881740365!GO:0009116;nucleoside metabolic process;0.021397822323749!GO:0043281;regulation of caspase activity;0.0215118264817363!GO:0030118;clathrin coat;0.0215609389392523!GO:0019843;rRNA binding;0.0215624031803412!GO:0030137;COPI-coated vesicle;0.0216326947859177!GO:0000119;mediator complex;0.0224870932736759!GO:0003678;DNA helicase activity;0.0225076798739221!GO:0051336;regulation of hydrolase activity;0.0226311278162454!GO:0006338;chromatin remodeling;0.0231989042822845!GO:0030663;COPI coated vesicle membrane;0.0236140760149863!GO:0030126;COPI vesicle coat;0.0236140760149863!GO:0006595;polyamine metabolic process;0.0236140760149863!GO:0008017;microtubule binding;0.0236386861113125!GO:0006672;ceramide metabolic process;0.0237978642977536!GO:0009607;response to biotic stimulus;0.0237978642977536!GO:0008097;5S rRNA binding;0.0242670402594692!GO:0006506;GPI anchor biosynthetic process;0.024339622848038!GO:0004722;protein serine/threonine phosphatase activity;0.0243505702821549!GO:0006497;protein amino acid lipidation;0.0244161923295197!GO:0005832;chaperonin-containing T-complex;0.0250703819142466!GO:0051052;regulation of DNA metabolic process;0.0251830274756392!GO:0043596;nuclear replication fork;0.0255795049136962!GO:0031647;regulation of protein stability;0.0256116663735105!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0257810451700734!GO:0050851;antigen receptor-mediated signaling pathway;0.0259104222646914!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0263894048715024!GO:0046649;lymphocyte activation;0.0264374359343178!GO:0000075;cell cycle checkpoint;0.0273817423724371!GO:0045730;respiratory burst;0.0274775471357252!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0278739159581205!GO:0060090;molecular adaptor activity;0.02793891273096!GO:0008139;nuclear localization sequence binding;0.0284124459845715!GO:0004576;oligosaccharyl transferase activity;0.0284531923977567!GO:0003682;chromatin binding;0.0284800775729086!GO:0000776;kinetochore;0.0292484788794046!GO:0005689;U12-dependent spliceosome;0.0294566586769517!GO:0000738;DNA catabolic process, exonucleolytic;0.0296331756217054!GO:0008047;enzyme activator activity;0.0298288878500097!GO:0007004;telomere maintenance via telomerase;0.0300021058824982!GO:0045792;negative regulation of cell size;0.0300595105749284!GO:0006914;autophagy;0.0300901718774164!GO:0008180;signalosome;0.0300901718774164!GO:0002376;immune system process;0.0300901718774164!GO:0015923;mannosidase activity;0.0300901718774164!GO:0048002;antigen processing and presentation of peptide antigen;0.0301141189598235!GO:0000123;histone acetyltransferase complex;0.0301345828045924!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0302176732454553!GO:0043087;regulation of GTPase activity;0.0305551448368973!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0305897065887245!GO:0019814;immunoglobulin complex;0.0307483314585574!GO:0019815;B cell receptor complex;0.0307483314585574!GO:0050853;B cell receptor signaling pathway;0.0308938035950048!GO:0009112;nucleobase metabolic process;0.0310946653935602!GO:0000175;3'-5'-exoribonuclease activity;0.0314136628173073!GO:0008538;proteasome activator activity;0.031712358457986!GO:0005758;mitochondrial intermembrane space;0.0319138858731721!GO:0000287;magnesium ion binding;0.0321846368867234!GO:0030867;rough endoplasmic reticulum membrane;0.0332072361590246!GO:0030308;negative regulation of cell growth;0.0334773317943671!GO:0046822;regulation of nucleocytoplasmic transport;0.0336426832338518!GO:0051059;NF-kappaB binding;0.0338707841546474!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0343391027331518!GO:0043550;regulation of lipid kinase activity;0.0348543833413713!GO:0000339;RNA cap binding;0.0350765067273334!GO:0030660;Golgi-associated vesicle membrane;0.0360144496356209!GO:0044438;microbody part;0.0362389198543594!GO:0044439;peroxisomal part;0.0362389198543594!GO:0030522;intracellular receptor-mediated signaling pathway;0.0363931294454797!GO:0008276;protein methyltransferase activity;0.0365776921190754!GO:0004540;ribonuclease activity;0.0366107835804124!GO:0051090;regulation of transcription factor activity;0.0366807748535726!GO:0046128;purine ribonucleoside metabolic process;0.0367395536440147!GO:0042278;purine nucleoside metabolic process;0.0367395536440147!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0368539759984326!GO:0010257;NADH dehydrogenase complex assembly;0.0368539759984326!GO:0033108;mitochondrial respiratory chain complex assembly;0.0368539759984326!GO:0051092;activation of NF-kappaB transcription factor;0.0371245025835235!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0374694655734116!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0374694655734116!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0377096481114899!GO:0008287;protein serine/threonine phosphatase complex;0.0377271246209426!GO:0005819;spindle;0.0385741611323289!GO:0030097;hemopoiesis;0.0390385711840264!GO:0005521;lamin binding;0.0390766061021443!GO:0031124;mRNA 3'-end processing;0.0395592597351449!GO:0008213;protein amino acid alkylation;0.0397424838984604!GO:0006479;protein amino acid methylation;0.0397424838984604!GO:0005784;translocon complex;0.0400211761592226!GO:0007040;lysosome organization and biogenesis;0.0400211761592226!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0403749312036375!GO:0005777;peroxisome;0.0403749312036375!GO:0042579;microbody;0.0403749312036375!GO:0035258;steroid hormone receptor binding;0.0407381704958021!GO:0005092;GDP-dissociation inhibitor activity;0.0409310579395144!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0418670272637012!GO:0002757;immune response-activating signal transduction;0.0430964099742855!GO:0042824;MHC class I peptide loading complex;0.0432860359001456!GO:0008250;oligosaccharyl transferase complex;0.043708172568953!GO:0022415;viral reproductive process;0.043708172568953!GO:0030041;actin filament polymerization;0.044115669463787!GO:0045926;negative regulation of growth;0.0442472834655703!GO:0050811;GABA receptor binding;0.0449077439331131!GO:0009161;ribonucleoside monophosphate metabolic process;0.0449725642397439!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0449725642397439!GO:0051098;regulation of binding;0.0449725642397439!GO:0017134;fibroblast growth factor binding;0.045279607604427!GO:0000726;non-recombinational repair;0.0470713949501107!GO:0031903;microbody membrane;0.0471553363369497!GO:0005778;peroxisomal membrane;0.0471553363369497!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.048078816615169!GO:0006144;purine base metabolic process;0.0481036364783265!GO:0000781;chromosome, telomeric region;0.0482980117693063!GO:0046483;heterocycle metabolic process;0.048465019660402!GO:0032508;DNA duplex unwinding;0.0492435940179959!GO:0032392;DNA geometric change;0.0492435940179959!GO:0042611;MHC protein complex;0.0499618208058434 | |||
|sample_id=12214 | |||
|sample_note= | |||
|sample_sex= | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=blood | |||
|top_motifs=POU5F1:3.26385349766;POU2F1..3:3.25768328956;FOXA2:2.99347565432;TLX2:2.35874935896;ELF1,2,4:1.8673962948;PBX1:1.61680263321;FOXO1,3,4:1.46525934415;SPI1:1.41527205605;DMAP1_NCOR{1,2}_SMARC:1.41325129575;ELK1,4_GABP{A,B1}:1.36104851204;CRX:1.35993166707;IRF1,2:1.32452791988;FOX{D1,D2}:1.28042870971;SPIB:1.24115181948;PDX1:1.22489282632;FOX{F1,F2,J1}:1.20709555059;ETS1,2:1.16724520853;FOX{I1,J2}:1.14452326507;RUNX1..3:1.14441006506;RFX2..5_RFXANK_RFXAP:1.12020063339;YY1:1.04699160472;MYOD1:1.04239507687;FOXP3:1.01257961647;NFKB1_REL_RELA:1.01007630766;NANOG{mouse}:0.994034625104;PAX3,7:0.985497380756;PAX6:0.943866621563;OCT4_SOX2{dimer}:0.940786955679;ALX1:0.865203536038;LMO2:0.824860050425;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.760267280655;VSX1,2:0.75113773466;ZEB1:0.683551301402;STAT1,3:0.682884328765;BPTF:0.68151320088;IRF7:0.673555355131;RORA:0.654964952803;CDX1,2,4:0.647999575976;ESR1:0.621310235411;TGIF1:0.618725125732;GATA6:0.607642834234;AIRE:0.606033246857;FOXN1:0.5816310476;CREB1:0.548690739474;NKX2-1,4:0.540209866628;ATF5_CREB3:0.530247385744;HBP1_HMGB_SSRP1_UBTF:0.523110221299;NKX6-1,2:0.492811589724;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.458911623073;LEF1_TCF7_TCF7L1,2:0.442455515699;MYB:0.415675036871;ATF2:0.409212408206;SNAI1..3:0.389192842906;ALX4:0.35562323885;ZNF143:0.343262030498;MEF2{A,B,C,D}:0.336895041689;SOX5:0.307879607851;BREu{core}:0.306380789167;PRRX1,2:0.30126427543;HMX1:0.291992476888;NR5A1,2:0.276264684039;ATF4:0.275922570333;SOX{8,9,10}:0.262357489777;GLI1..3:0.251279666825;SREBF1,2:0.207005472254;NRF1:0.20290008503;CUX2:0.173662791167;NKX2-2,8:0.162807459152;HOX{A6,A7,B6,B7}:0.107112956215;NFIX:0.102983553685;FOXL1:0.0990170635615;FOXP1:0.075770915176;EP300:0.0632004954976;PAX2:0.0149093527445;ZNF148:0.00955166006823;NFY{A,B,C}:-0.0353441255858;NFIL3:-0.037230552424;HAND1,2:-0.0695106590422;AHR_ARNT_ARNT2:-0.0781491614432;ADNP_IRX_SIX_ZHX:-0.0812875066307;HES1:-0.0887633703143;ZFP161:-0.0894881284916;GFI1:-0.106341084513;NHLH1,2:-0.142802903848;STAT5{A,B}:-0.143487966643;PAX4:-0.146298404872;T:-0.18048630647;EVI1:-0.1831688609;NFATC1..3:-0.193934187782;NANOG:-0.207097493017;TEF:-0.244739196813;AR:-0.252375408178;PRDM1:-0.254573035845;POU1F1:-0.261271468634;MAFB:-0.281931411769;HNF4A_NR2F1,2:-0.285926540967;HIF1A:-0.295260718914;E2F1..5:-0.322889349007;SPZ1:-0.334106694521;HOXA9_MEIS1:-0.358274513046;NKX2-3_NKX2-5:-0.369951260458;CEBPA,B_DDIT3:-0.371971660854;RXRA_VDR{dimer}:-0.374684967226;ZBTB16:-0.374773620485;ATF6:-0.407325624278;IKZF2:-0.418583883968;HNF1A:-0.42723615415;TFAP4:-0.432322253306;FOXQ1:-0.439565857168;RXR{A,B,G}:-0.453388362278;TAL1_TCF{3,4,12}:-0.457383993102;POU6F1:-0.472761851551;RFX1:-0.489963258082;bHLH_family:-0.490346578808;PPARG:-0.496617503311;RBPJ:-0.542273196078;FOSL2:-0.56654232119;EBF1:-0.600139172584;HOX{A4,D4}:-0.60027329077;FOS_FOS{B,L1}_JUN{B,D}:-0.600658923149;ONECUT1,2:-0.606628651171;ZNF238:-0.631840241075;SRF:-0.634753815108;JUN:-0.65295605497;NR6A1:-0.655219308342;TBP:-0.656635824289;BACH2:-0.674498208107;SOX2:-0.681440666384;DBP:-0.733857196525;CDC5L:-0.748351117322;HLF:-0.752311968985;SMAD1..7,9:-0.772488835872;EGR1..3:-0.780792918232;MYFfamily:-0.783287831572;TOPORS:-0.810735343826;NKX3-2:-0.814463990061;TFCP2:-0.837418736218;SOX17:-0.842365910395;NKX3-1:-0.876523463929;MYBL2:-0.888419460272;NR1H4:-0.89816555298;ARID5B:-0.919336224832;HOX{A5,B5}:-0.954112896275;NFE2:-0.958482368024;NFE2L2:-0.972190009501;REST:-0.97604702788;ZNF384:-0.982491093164;GFI1B:-0.995209726799;PATZ1:-1.00516709302;STAT2,4,6:-1.01579333655;MTE{core}:-1.01679155148;XCPE1{core}:-1.02048219748;EN1,2:-1.02116960835;RREB1:-1.04609406784;NR3C1:-1.04854971227;TP53:-1.18240030487;MZF1:-1.19344517727;MED-1{core}:-1.20815014263;GZF1:-1.22934430791;HMGA1,2:-1.23271669847;GATA4:-1.23370985783;LHX3,4:-1.25126828693;PITX1..3:-1.25595145414;TBX4,5:-1.25835100863;ZNF423:-1.26050367419;MTF1:-1.2722223867;MAZ:-1.28121620075;ESRRA:-1.34185689057;XBP1:-1.39805224238;HIC1:-1.43007538116;UFEwm:-1.46241219285;GCM1,2:-1.50961573194;HSF1,2:-1.51170993646;GTF2I:-1.51774991292;TFAP2B:-1.53116702014;PAX8:-1.5595570143;TEAD1:-1.5869166056;NFE2L1:-1.59882473429;PAX5:-1.60283677243;SP1:-1.63453709178;FOXD3:-1.65188753236;FOXM1:-1.65443645389;POU3F1..4:-1.70258865758;TFAP2{A,C}:-1.72791106229;TFDP1:-1.73014844612;KLF4:-1.73472119802;GTF2A1,2:-1.75396430889;ZBTB6:-1.79984198251;TLX1..3_NFIC{dimer}:-1.96336231235;IKZF1:-2.07022476474;ZIC1..3:-2.11161875079;PAX1,9:-2.70139800359 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12214-129D9;search_select_hide=table117:FF:12214-129D9 | |||
}} | }} |
Latest revision as of 18:34, 4 June 2020
Name: | CD19+ B Cells (pluriselect), donor090612, donation3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12188,RDhi10012 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12188
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12188
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.121 |
10 | 10 | 0.0398 |
100 | 100 | 0.609 |
101 | 101 | 0.5 |
102 | 102 | 0.993 |
103 | 103 | 0.125 |
104 | 104 | 0.177 |
105 | 105 | 0.323 |
106 | 106 | 0.652 |
107 | 107 | 0.227 |
108 | 108 | 0.229 |
109 | 109 | 0.111 |
11 | 11 | 0.21 |
110 | 110 | 0.16 |
111 | 111 | 0.288 |
112 | 112 | 0.252 |
113 | 113 | 0.0347 |
114 | 114 | 0.531 |
115 | 115 | 0.867 |
116 | 116 | 0.71 |
117 | 117 | 0.00148 |
118 | 118 | 0.171 |
119 | 119 | 0.721 |
12 | 12 | 0.998 |
120 | 120 | 0.546 |
121 | 121 | 0.424 |
122 | 122 | 0.311 |
123 | 123 | 0.236 |
124 | 124 | 0.114 |
125 | 125 | 0.37 |
126 | 126 | 0.411 |
127 | 127 | 0.598 |
128 | 128 | 0.472 |
129 | 129 | 0.822 |
13 | 13 | 0.428 |
130 | 130 | 0.565 |
131 | 131 | 0.58 |
132 | 132 | 0.351 |
133 | 133 | 0.0118 |
134 | 134 | 0.772 |
135 | 135 | 0.63 |
136 | 136 | 0.601 |
137 | 137 | 0.129 |
138 | 138 | 0.614 |
139 | 139 | 0.158 |
14 | 14 | 0.369 |
140 | 140 | 0.973 |
141 | 141 | 0.633 |
142 | 142 | 0.655 |
143 | 143 | 0.0282 |
144 | 144 | 0.714 |
145 | 145 | 0.483 |
146 | 146 | 0.124 |
147 | 147 | 0.105 |
148 | 148 | 0.108 |
149 | 149 | 0.445 |
15 | 15 | 0.128 |
150 | 150 | 0.739 |
151 | 151 | 0.728 |
152 | 152 | 0.484 |
153 | 153 | 0.697 |
154 | 154 | 0.852 |
155 | 155 | 0.00441 |
156 | 156 | 0.293 |
157 | 157 | 0.26 |
158 | 158 | 0.158 |
159 | 159 | 0.137 |
16 | 16 | 0.948 |
160 | 160 | 0.352 |
161 | 161 | 0.11 |
162 | 162 | 0.849 |
163 | 163 | 0.334 |
164 | 164 | 0.435 |
165 | 165 | 0.203 |
166 | 166 | 0.802 |
167 | 167 | 0.144 |
168 | 168 | 0.127 |
169 | 169 | 0.562 |
17 | 17 | 0.722 |
18 | 18 | 0.451 |
19 | 19 | 0.675 |
2 | 2 | 0.81 |
20 | 20 | 0.593 |
21 | 21 | 0.87 |
22 | 22 | 0.782 |
23 | 23 | 0.695 |
24 | 24 | 0.443 |
25 | 25 | 0.0152 |
26 | 26 | 0.192 |
27 | 27 | 0.205 |
28 | 28 | 0.477 |
29 | 29 | 0.0748 |
3 | 3 | 0.0689 |
30 | 30 | 0.38 |
31 | 31 | 0.768 |
32 | 32 | 0.33 |
33 | 33 | 0.467 |
34 | 34 | 0.892 |
35 | 35 | 0.139 |
36 | 36 | 0.0226 |
37 | 37 | 0.159 |
38 | 38 | 0.594 |
39 | 39 | 0.481 |
4 | 4 | 0.582 |
40 | 40 | 0.185 |
41 | 41 | 0.138 |
42 | 42 | 0.114 |
43 | 43 | 0.162 |
44 | 44 | 0.484 |
45 | 45 | 0.945 |
46 | 46 | 0.188 |
47 | 47 | 0.124 |
48 | 48 | 0.196 |
49 | 49 | 0.12 |
5 | 5 | 0.406 |
50 | 50 | 0.855 |
51 | 51 | 0.486 |
52 | 52 | 0.442 |
53 | 53 | 0.478 |
54 | 54 | 0.784 |
55 | 55 | 0.11 |
56 | 56 | 0.678 |
57 | 57 | 0.504 |
58 | 58 | 0.0218 |
59 | 59 | 0.32 |
6 | 6 | 0.77 |
60 | 60 | 0.444 |
61 | 61 | 0.0225 |
62 | 62 | 0.0188 |
63 | 63 | 0.748 |
64 | 64 | 0.388 |
65 | 65 | 0.865 |
66 | 66 | 0.848 |
67 | 67 | 0.638 |
68 | 68 | 0.278 |
69 | 69 | 0.737 |
7 | 7 | 0.0718 |
70 | 70 | 0.189 |
71 | 71 | 0.0381 |
72 | 72 | 0.0201 |
73 | 73 | 0.58 |
74 | 74 | 0.258 |
75 | 75 | 0.0141 |
76 | 76 | 0.0754 |
77 | 77 | 0.655 |
78 | 78 | 0.15 |
79 | 79 | 0.373 |
8 | 8 | 0.659 |
80 | 80 | 0.00334 |
81 | 81 | 0.233 |
82 | 82 | 0.113 |
83 | 83 | 0.839 |
84 | 84 | 0.336 |
85 | 85 | 0.972 |
86 | 86 | 0.0931 |
87 | 87 | 0.222 |
88 | 88 | 0.903 |
89 | 89 | 0.648 |
9 | 9 | 0.393 |
90 | 90 | 0.0289 |
91 | 91 | 0.637 |
92 | 92 | 0.755 |
93 | 93 | 0.891 |
94 | 94 | 0.0578 |
95 | 95 | 0.0103 |
96 | 96 | 0.438 |
97 | 97 | 0.495 |
98 | 98 | 0.211 |
99 | 99 | 0.0455 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12188
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000025 CD19-positive B cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)