FFCP PHASE1:Mm9::chr19:12873114..12873126,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12873114..12873126,+
|short_description=p2@Lpxn
|description=CAGE_peak_2_at_Lpxn_5end
|association_with_transcript=15bp_to_NM_134152,uc008guq.1_5end
|Ent...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107321 | |EntrezGene=107321 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1271 | |||
|TSSclassifier=NA | |||
|UniProt=Q99N69 | |UniProt=Q99N69 | ||
|association_with_transcript=15bp_to_NM_134152,uc008guq.1_5end | |||
|cluster_id=chr19:12873114..12873126,+ | |||
|description=CAGE_peak_2_at_Lpxn_5end | |||
|id=chr19:12873114..12873126,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.63e-14!32;CL:0002032!7.63e-14!32;CL:0000037!7.63e-14!32;CL:0000566!7.63e-14!32;CL:0000837!7.63e-14!32;CL:0002031!5.59e-11!25;CL:0000738!2.59e-09!17;CL:0002087!2.59e-09!17;CL:0000838!1.29e-08!12;CL:0002320!2.32e-08!46;CL:0000134!2.32e-08!46;CL:0000084!7.67e-08!11;CL:0000827!7.67e-08!11;CL:0000049!1.18e-07!19;CL:0000542!1.79e-07!13;CL:0000051!1.79e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.86e-26,32;CL:0002032,2.86e-26,32;CL:0000037,2.86e-26,32;CL:0000837,2.86e-26,32;CL:0002320,2.85e-21,46;CL:0000134,2.85e-21,46;CL:0002031,1.95e-19,25;CL:0000219,7.15e-17,54;CL:0000738,7.02e-16,17;CL:0002087,7.02e-16,17;CL:0000838,1.09e-14,12;CL:0000049,6.45e-14,19;CL:0000542,2.48e-13,13;CL:0000051,2.48e-13,13;CL:0000084,4.33e-13,11;CL:0000827,4.33e-13,11;CL:0000791,2.28e-10,9;CL:0000789,2.28e-10,9;CL:0002420,2.28e-10,9;CL:0002419,2.28e-10,9;CL:0000790,2.28e-10,9;CL:0000763,2.66e-10,16;CL:0000624,8.41e-09,8;CL:0000034,7.30e-08,97;CL:0000557,8.46e-08,7;CL:0000723,1.52e-07,91;CL:0000048,1.52e-07,91;CL:0000553,4.78e-07,6;CL:0000556,4.78e-07,6;CL:0000839,6.29e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.71e-24!48;UBERON:0002390!3.13e-22!45;UBERON:0003061!3.13e-22!45;UBERON:0002405!1.21e-15!70;UBERON:0004177!2.87e-12!29;UBERON:0002371!8.12e-11!16;UBERON:0003081!3.73e-10!88;UBERON:0006562!1.67e-09!24;UBERON:0001557!1.67e-09!24;UBERON:0001042!1.67e-09!24;UBERON:0008814!1.67e-09!24;UBERON:0009145!1.67e-09!24;UBERON:0002370!2.46e-09!23;UBERON:0000974!2.46e-09!23;UBERON:0004807!2.46e-09!23;UBERON:0005058!2.46e-09!23;UBERON:0003351!2.46e-09!23;UBERON:0009113!2.46e-09!23;UBERON:0003295!2.46e-09!23;UBERON:0009722!2.46e-09!23;UBERON:0005562!2.46e-09!23;UBERON:0007690!2.46e-09!23;UBERON:0003408!1.55e-08!24;UBERON:0002384!2.32e-08!46;UBERON:0000065!1.37e-07!41;UBERON:0000072!2.39e-07!27;UBERON:0001474!2.74e-07!22;UBERON:0004765!2.74e-07!22;UBERON:0001434!2.74e-07!22;UBERON:0001004!4.05e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.21e-45,48;UBERON:0002405,9.21e-45,48;UBERON:0002390,4.29e-43,45;UBERON:0003061,4.29e-43,45;UBERON:0004177,3.71e-25,29;UBERON:0005057,3.71e-25,29;UBERON:0002384,2.85e-21,46;UBERON:0000077,1.28e-19,35;UBERON:0002370,6.82e-19,23;UBERON:0000974,6.82e-19,23;UBERON:0004807,6.82e-19,23;UBERON:0005058,6.82e-19,23;UBERON:0003351,6.82e-19,23;UBERON:0009113,6.82e-19,23;UBERON:0003295,6.82e-19,23;UBERON:0009722,6.82e-19,23;UBERON:0005562,6.82e-19,23;UBERON:0007690,6.82e-19,23;UBERON:0003081,4.25e-18,87;UBERON:0006562,7.02e-18,24;UBERON:0003408,7.02e-18,24;UBERON:0001557,7.02e-18,24;UBERON:0001042,7.02e-18,24;UBERON:0008814,7.02e-18,24;UBERON:0009145,7.02e-18,24;UBERON:0002371,1.27e-17,16;UBERON:0000072,2.67e-15,27;UBERON:0000065,5.52e-13,41;UBERON:0001004,1.58e-12,42;UBERON:0000926,9.82e-12,120;UBERON:0004120,9.82e-12,120;UBERON:0006603,9.82e-12,120;UBERON:0001474,1.02e-11,22;UBERON:0004765,1.02e-11,22;UBERON:0001434,1.02e-11,22;UBERON:0007811,3.43e-10,36;UBERON:0002204,5.66e-08,32;UBERON:0000153,9.59e-08,43;UBERON:0001041,1.28e-07,80;UBERON:0002106,1.72e-07,6;UBERON:0004457,1.72e-07,6;UBERON:0000042,1.72e-07,6;UBERON:0004854,1.72e-07,6;UBERON:0009034,1.72e-07,6;UBERON:0002095,1.72e-07,6;UBERON:0004782,1.72e-07,6;UBERON:0003281,1.72e-07,6;UBERON:0009664,1.72e-07,6;UBERON:0002296,1.72e-07,6;UBERON:0005602,1.72e-07,6;UBERON:0001179,1.72e-07,6;UBERON:0006293,1.72e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,4.78681655315667,1.17032263160997,2.39705155515707,0.478632953972018,4.45121897821135,2.88487327982691,2.33176833270964,4.25198061518635,0.699561878128147,15.7731082679119,14.3970155286026,16.1268067683251,0.0850432901510698,4.17021995043718,7.57479388502913,0.799962113967033,1.83527424853736,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0.418531630736908,2.3440060335714,0.523523743973798,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,20.1339127269284,13.7818806982155,24.8709411365423,0,0.286533439938757,0,0.202316460859598,0,0,0,0,8.09909745553259,9.88866362566974,4.2628806896766,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0,0.832988126665025,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,19.9382170408322,0.890652834388949,0,0,0,0,0.352766121407114,0.251333182659351,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0,0,1.53274233125155,4.43315960671905,3.59941638596045,4.44745794755726,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.407357455401265,0.746441823660558,0.505445516867349,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.823128545631774,0,5.61770549850588,3.3455227924913,4.26245249093389,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0,0.438599962275997,0,0.402619256281115,0.420579897128254,0.102904612379284,2.31293148088659,0,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.658795818896044,0.754005626400808,0,0.19496408711912,0,0.648414149624083,0.398282546508734,0,0.342745537829186,0,0,0,0,0.126473074248515,0.147610147979602,0.31399745568275,0,0.296452627087149,0,0,0,0.202860121388503,0,0.763877555344259,0.287696137450811,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,3.32555742299888,0.189491411770485,0,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.478364305972461,2.13022309130459,2.07221978239075,1.3018415272336,15.0791283939272,6.52686820582452,0,1.10374698521893,0,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.824850614862677,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.32977250588296,1.45317984026315,0.180938774784468,0.477489376012546,0.164140899745061,0,0.370850604021019,2.73393409276564,1.23832120777933,1.66675074632741,1.50694765603753,2.1871076435364,3.43167259809784,1.5298058699447,1.25956307091292,0.690999869022119,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.259229946583586,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,4.4241556887945,1.41907650703115,2.05421914329655,2.33857481360031,3.40150721768215,2.58285761215644,2.76449533895928,3.2491695978407,3.23092639834072,4.64861520595499,3.42809029465258,3.41102582589133,4.52195655709548,4.9088298916259,0.453460767230423,0,0,0,0.579568782096571,0.93841237725591,1.28206136987086,0.214368379079066,2.00628841614145,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0,0.0936415074698824,0.640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0,0.407412341537585,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,6.45616617207881,4.78681655315667,1.17032263160997,2.39705155515707,0.478632953972018,4.45121897821135,2.88487327982691,2.33176833270964,4.25198061518635,0.699561878128147,15.7731082679119,14.3970155286026,16.1268067683251,0.0850432901510698,4.17021995043718,7.57479388502913,0.799962113967033,1.83527424853736,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0.418531630736908,2.3440060335714,0.523523743973798,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,20.1339127269284,13.7818806982155,24.8709411365423,0,0.286533439938757,0,0.202316460859598,0,0,0,0,8.09909745553259,9.88866362566974,4.2628806896766,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0,0.832988126665025,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,19.9382170408322,0.890652834388949,0,0,0,0,0.352766121407114,0.251333182659351,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0,0,1.53274233125155,4.43315960671905,3.59941638596045,4.44745794755726,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.407357455401265,0.746441823660558,0.505445516867349,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.823128545631774,0,5.61770549850588,3.3455227924913,4.26245249093389,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0,0.438599962275997,0,0.402619256281115,0.420579897128254,0.102904612379284,2.31293148088659,0,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.658795818896044,0.754005626400808,0,0.19496408711912,0,0.648414149624083,0.398282546508734,0,0.342745537829186,0,0,0,0,0.126473074248515,0.147610147979602,0.31399745568275,0,0.296452627087149,0,0,0,0.202860121388503,0,0.763877555344259,0.287696137450811,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,3.32555742299888,0.189491411770485,0,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.478364305972461,2.13022309130459,2.07221978239075,1.3018415272336,15.0791283939272,6.52686820582452,0,1.10374698521893,0,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.824850614862677,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.32977250588296,1.45317984026315,0.180938774784468,0.477489376012546,0.164140899745061,0,0.370850604021019,2.73393409276564,1.23832120777933,1.66675074632741,1.50694765603753,2.1871076435364,3.43167259809784,1.5298058699447,1.25956307091292,0.690999869022119,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.259229946583586,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,4.4241556887945,1.41907650703115,2.05421914329655,2.33857481360031,3.40150721768215,2.58285761215644,2.76449533895928,3.2491695978407,3.23092639834072,4.64861520595499,3.42809029465258,3.41102582589133,4.52195655709548,4.9088298916259,0.453460767230423,0,0,0,0.579568782096571,0.93841237725591,1.28206136987086,0.214368379079066,2.00628841614145,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0,0.0936415074698824,0.640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0,0.407412341537585,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421 | ||
|short_description=p2@Lpxn | |||
}} | }} |
Latest revision as of 22:37, 1 October 2015
Short description: | p2@Lpxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lpxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:1271 |
Association with transcript: | 15bp_to_NM_134152, uc008guq.1_5end |
EntrezGene: | Lpxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.86e-26 | 32 |
hematopoietic oligopotent progenitor cell | 2.86e-26 | 32 |
hematopoietic stem cell | 2.86e-26 | 32 |
hematopoietic multipotent progenitor cell | 2.86e-26 | 32 |
connective tissue cell | 2.85e-21 | 46 |
mesenchymal cell | 2.85e-21 | 46 |
hematopoietic lineage restricted progenitor cell | 1.95e-19 | 25 |
motile cell | 7.15e-17 | 54 |
leukocyte | 7.02e-16 | 17 |
nongranular leukocyte | 7.02e-16 | 17 |
lymphoid lineage restricted progenitor cell | 1.09e-14 | 12 |
common myeloid progenitor | 6.45e-14 | 19 |
lymphocyte | 2.48e-13 | 13 |
common lymphoid progenitor | 2.48e-13 | 13 |
T cell | 4.33e-13 | 11 |
pro-T cell | 4.33e-13 | 11 |
mature alpha-beta T cell | 2.28e-10 | 9 |
alpha-beta T cell | 2.28e-10 | 9 |
immature T cell | 2.28e-10 | 9 |
mature T cell | 2.28e-10 | 9 |
immature alpha-beta T cell | 2.28e-10 | 9 |
myeloid cell | 2.66e-10 | 16 |
CD4-positive, alpha-beta T cell | 8.41e-09 | 8 |
stem cell | 7.30e-08 | 97 |
granulocyte monocyte progenitor cell | 8.46e-08 | 7 |
somatic stem cell | 1.52e-07 | 91 |
multi fate stem cell | 1.52e-07 | 91 |
megakaryocyte progenitor cell | 4.78e-07 | 6 |
megakaryocyte | 4.78e-07 | 6 |
myeloid lineage restricted progenitor cell | 6.29e-07 | 13 |