FFCP PHASE1:Mm9::chr17:47642022..47642033,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:47642022..47642033,+
|short_description=p13@Ccnd3
|description=CAGE_peak_13_at_Ccnd3_5end
|association_with_transcript=22bp_to_ENSMUST00000171031,NM_00108...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12445 | |EntrezGene=12445 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=P30282,Q3TSW4,Q3TWY0 | |UniProt=P30282,Q3TSW4,Q3TWY0 | ||
|association_with_transcript=22bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end | |||
|cluster_id=chr17:47642022..47642033,+ | |||
|description=CAGE_peak_13_at_Ccnd3_5end | |||
|id=chr17:47642022..47642033,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.24e-11,25;CL:0000553,4.65e-09,6;CL:0000556,4.65e-09,6;CL:0000988,6.06e-08,32;CL:0002032,6.06e-08,32;CL:0000037,6.06e-08,32;CL:0000837,6.06e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.42e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.59e-22,48;UBERON:0002405,5.59e-22,48;UBERON:0002390,1.25e-21,45;UBERON:0003061,1.25e-21,45;UBERON:0003408,4.25e-21,24;UBERON:0002370,1.77e-19,23;UBERON:0000974,1.77e-19,23;UBERON:0004807,1.77e-19,23;UBERON:0005058,1.77e-19,23;UBERON:0003351,1.77e-19,23;UBERON:0009113,1.77e-19,23;UBERON:0003295,1.77e-19,23;UBERON:0009722,1.77e-19,23;UBERON:0005562,1.77e-19,23;UBERON:0007690,1.77e-19,23;UBERON:0004177,3.63e-19,29;UBERON:0005057,3.63e-19,29;UBERON:0006562,1.60e-18,24;UBERON:0001557,1.60e-18,24;UBERON:0001042,1.60e-18,24;UBERON:0008814,1.60e-18,24;UBERON:0009145,1.60e-18,24;UBERON:0000072,4.45e-16,27;UBERON:0000077,3.38e-15,35;UBERON:0007811,7.92e-13,36;UBERON:0003081,9.60e-12,87;UBERON:0001004,1.77e-10,42;UBERON:0000153,3.76e-10,43;UBERON:0000065,1.98e-09,41;UBERON:0000926,8.68e-08,120;UBERON:0004120,8.68e-08,120;UBERON:0006603,8.68e-08,120;UBERON:0002530,2.52e-07,65 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,2.1950964985068,0.281577444303333,0,0,0.398860794976682,3.93761678841773,3.14713448708391,0.999329285446988,1.01237633694913,1.39912375625629,1.57731082679119,1.64537320326887,1.69755860719212,0.510259740906419,0.397163804803541,0.783599367416806,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,2.61761871986899,2.94115744015507,2.04913645487534,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,1.67782606057736,1.45072428402269,2.35265659399725,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,1.55362730188303,0.742210695324124,0.346970653532272,0.304465478312141,0,0.452167921657868,0.23517741427141,0.376999773989026,0,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0.299581278809645,0,0,0,0,0,0.162241263067758,0.712875546952214,1.36847667671102,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.646703978798527,0.756424320671277,0.175951124163949,0,0,0.696504333044333,0,0.796137067273973,0,0,0,0.621377317606506,0,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.804820204198858,1.05088808130453,0.329119699826961,0,0.405344047729279,0.584799949701329,0.658650345873152,0.402619256281115,0,0,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.420814919341911,0.505892296994058,0.295220295959204,0.941992367048249,0.370191491765402,0,0,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.575392274901621,0.648540907100142,0,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,0.947457058852424,0,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,0,0.433947175744535,1.50791283939272,0,0.491764273019036,1.10374698521893,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.716906393857656,0,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0,0.567760340833074,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0.614870295887855,0.775284879504663,0,0,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0.645857706783622,0.120625849856312,0.119372344003136,0.164140899745061,0.582961673259701,0,0.854354403989263,0.206386867963223,1.48155621895769,0.565105371014073,0.546776910884101,1.37266903923914,1.35982743995084,1.95932033253121,1.10559979043539,0,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.58678619322877,0.13020438484395,0.209718688851422,0,0,6.00421129193539,0.405450430580328,0.102710957164827,1.94881234466693,2.32734704367726,6.75516606256301,4.44723163223885,6.35064966850682,7.26958439626663,5.71551049912499,9.07435666231565,10.1356195969343,10.9681499469976,13.4408437508804,0,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.36630324853453,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.384150914429216,0.402048282689293,0,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.956441660344217,0.220591419119515,0 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| ||
|short_description=p13@Ccnd3 | |||
}} | }} |
Latest revision as of 14:16, 26 September 2015
Short description: | p13@Ccnd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Ccnd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 22bp_to_ENSMUST00000171031, NM_001081635, NM_001081636, uc008cvk.1, uc008cvl.1, uc008cvm.1_5end |
EntrezGene: | Ccnd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 7.24e-11 | 25 |
megakaryocyte progenitor cell | 4.65e-09 | 6 |
megakaryocyte | 4.65e-09 | 6 |
hematopoietic cell | 6.06e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.06e-08 | 32 |
hematopoietic stem cell | 6.06e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.06e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.59e-22 | 48 |
immune system | 5.59e-22 | 48 |
hematopoietic system | 1.25e-21 | 45 |
blood island | 1.25e-21 | 45 |
gland of gut | 4.25e-21 | 24 |
thymus | 1.77e-19 | 23 |
neck | 1.77e-19 | 23 |
respiratory system epithelium | 1.77e-19 | 23 |
hemolymphoid system gland | 1.77e-19 | 23 |
pharyngeal epithelium | 1.77e-19 | 23 |
thymic region | 1.77e-19 | 23 |
pharyngeal gland | 1.77e-19 | 23 |
entire pharyngeal arch endoderm | 1.77e-19 | 23 |
thymus primordium | 1.77e-19 | 23 |
early pharyngeal endoderm | 1.77e-19 | 23 |
hemopoietic organ | 3.63e-19 | 29 |
immune organ | 3.63e-19 | 29 |
pharynx | 1.60e-18 | 24 |
upper respiratory tract | 1.60e-18 | 24 |
chordate pharynx | 1.60e-18 | 24 |
pharyngeal arch system | 1.60e-18 | 24 |
pharyngeal region of foregut | 1.60e-18 | 24 |
segment of respiratory tract | 4.45e-16 | 27 |
mixed endoderm/mesoderm-derived structure | 3.38e-15 | 35 |
craniocervical region | 7.92e-13 | 36 |
lateral plate mesoderm | 9.60e-12 | 87 |
respiratory system | 1.77e-10 | 42 |
anterior region of body | 3.76e-10 | 43 |
respiratory tract | 1.98e-09 | 41 |
mesoderm | 8.68e-08 | 120 |
mesoderm-derived structure | 8.68e-08 | 120 |
presumptive mesoderm | 8.68e-08 | 120 |
gland | 2.52e-07 | 65 |