FFCP PHASE1:Hg19::chrX:46123210..46123229,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:46123210..46123229,+ | |||
|description=CAGE_peak_at_chrX:46123210..46123229,+ | |||
|id=chrX:46123210..46123229,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.58e-15!43;CL:0000066!2.20e-14!254;CL:0000223!2.18e-12!59;CL:1000415!7.96e-11!2;CL:0000322!1.98e-07!3;CL:0002251!2.64e-07!21;CL:0000239!3.72e-07!3;CL:1000615!3.72e-07!3;CL:0002306!3.72e-07!3;CL:0002231!4.08e-07!3;CL:0002178!4.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1001319;5.16e-21;1!CL:1000600;5.16e-21;1!CL:0002535;2.35e-11;2!CL:1000415;3.35e-11;2!CL:0000322;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.22e-21,1;CL:1000600,4.22e-21,1;CL:0002535,2.23e-11,2;CL:1000415,3.70e-11,2;CL:0000322,6.78e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.30e-11;2!UBERON:0010056;4.30e-11;2 | |||
|ontology_enrichment_disease=DOID:305!1.09e-18!106;DOID:0050687!8.09e-14!143;DOID:1749!5.34e-12!14;DOID:299!3.22e-11!25;DOID:3493!1.80e-10!2;DOID:162!4.68e-07!235;DOID:14566!8.46e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.88e-21;1!DOID:3603;1.88e-21;1!DOID:1749;2.03e-13;14!DOID:4468;1.82e-11;2!DOID:4929;2.73e-11;2!DOID:3910;3.35e-11;2!DOID:299;7.14e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.88e-21,1;DOID:3603,1.88e-21,1;DOID:305,2.88e-18,106;DOID:0050687,1.96e-13,143;DOID:1749,1.98e-13,14;DOID:4468,1.82e-11,2;DOID:4929,2.73e-11,2;DOID:3910,3.35e-11,2;DOID:162,6.25e-08,235;DOID:299,7.14e-08,25;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.46e-11!7;UBERON:0001173!1.46e-11!7;UBERON:0004912!1.46e-11!7;UBERON:0000344!8.27e-10!12;UBERON:0006554!8.44e-09!44;UBERON:0003064!1.12e-08!37;UBERON:0001008!1.45e-08!45;UBERON:0001007!1.86e-08!155;UBERON:0001555!1.86e-08!155;UBERON:0007026!1.86e-08!155;UBERON:0001046!2.15e-08!19;UBERON:0004119!2.50e-08!169;UBERON:0000925!2.50e-08!169;UBERON:0006595!2.50e-08!169;UBERON:0005911!2.75e-08!82;UBERON:0000162!3.36e-08!14;UBERON:0001353!3.36e-08!14;UBERON:0000163!3.36e-08!14;UBERON:0006866!3.36e-08!14;UBERON:0000164!3.36e-08!14;UBERON:0000931!3.36e-08!14;UBERON:0000058!3.82e-08!26;UBERON:0004122!1.24e-07!15;UBERON:0002110!1.74e-07!3;UBERON:0006242!1.74e-07!3;UBERON:0004821!1.98e-07!3;UBERON:0003215!1.98e-07!3;UBERON:0002299!1.98e-07!3;UBERON:0006524!1.98e-07!3;UBERON:0008874!1.98e-07!3;UBERON:0002169!1.98e-07!3;UBERON:0004894!1.98e-07!3;UBERON:0006853!3.72e-07!3;UBERON:0007685!3.72e-07!3;UBERON:0004134!3.72e-07!3;UBERON:0003929!6.63e-07!54;UBERON:0002367!7.12e-07!11;UBERON:0010147!7.12e-07!11;UBERON:0009846!7.12e-07!11;UBERON:0003353!7.12e-07!11;UBERON:0004902!7.12e-07!11;UBERON:0003820!7.12e-07!11;UBERON:0009847!7.12e-07!11;UBERON:0000077!9.58e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;6.56e-26;7!UBERON:0001173;6.56e-26;7!UBERON:0000997;2.55e-21;1!UBERON:0005056;2.55e-21;1!UBERON:0004176;2.55e-21;1!UBERON:0004913;3.45e-21;1!UBERON:0003703;3.45e-21;1!UBERON:0001174;3.45e-21;1!UBERON:0004914;3.45e-21;1!UBERON:0004645;5.16e-21;1!UBERON:0001256;5.16e-21;1!UBERON:0001259;5.16e-21;1!UBERON:0002394;1.21e-20;4!UBERON:0003928;1.21e-20;4!UBERON:0000058;2.26e-18;10!UBERON:0006955;2.35e-11;2!UBERON:0004801;2.35e-11;2!UBERON:0001255;3.35e-11;2!UBERON:0004903;3.35e-11;2!UBERON:0001556;3.35e-11;2!UBERON:0002173;3.35e-11;2!UBERON:0002186;3.35e-11;2!UBERON:0000344;1.46e-09;20!UBERON:0002114;5.93e-08;2!UBERON:0002110;6.78e-08;3!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3!UBERON:0001723;8.02e-08;3!UBERON:0001033;8.02e-08;3!UBERON:0002423;9.79e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.82e-21,1;UBERON:0005056,2.82e-21,1;UBERON:0004913,3.45e-21,1;UBERON:0003703,3.45e-21,1;UBERON:0001174,3.45e-21,1;UBERON:0004914,3.45e-21,1;UBERON:0004645,4.22e-21,1;UBERON:0001256,4.22e-21,1;UBERON:0001259,4.22e-21,1;UBERON:0002294,2.75e-20,9;UBERON:0001173,2.75e-20,9;UBERON:0004912,2.75e-20,9;UBERON:0002394,4.24e-14,6;UBERON:0003928,4.24e-14,6;UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2;UBERON:0001255,3.02e-11,2;UBERON:0001556,3.02e-11,2;UBERON:0004903,3.35e-11,2;UBERON:0002173,3.35e-11,2;UBERON:0002186,3.35e-11,2;UBERON:0000058,5.52e-10,19;UBERON:0000344,1.40e-09,20;UBERON:0002114,5.93e-08,2;UBERON:0004821,6.78e-08,3;UBERON:0003215,6.78e-08,3;UBERON:0010368,6.78e-08,3;UBERON:0009911,6.78e-08,3;UBERON:0002299,6.78e-08,3;UBERON:0006524,6.78e-08,3;UBERON:0008874,6.78e-08,3;UBERON:0002169,6.78e-08,3;UBERON:0004894,6.78e-08,3;UBERON:0002110,7.26e-08,3;UBERON:0006242,7.26e-08,3;UBERON:0001723,7.76e-08,3;UBERON:0001033,7.76e-08,3;UBERON:0010056,7.76e-08,3;UBERON:0007499,9.91e-08,25;UBERON:0009497,1.01e-07,25;UBERON:0000015,1.01e-07,25;UBERON:0002423,1.01e-07,25;UBERON:0006235,1.01e-07,25;UBERON:0004161,1.01e-07,25;UBERON:0009856,1.87e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,0,0,0,2.79679015322043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9159949956178,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05545261383519,7.48709176591462,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,2.56508224804908,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.77691829129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,1.61735932610474,0,0,0,0,0,0,0,0,5.61853127624772,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.333694205676207,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0.196300467230486,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,2.93051766999508,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:46123210..46123229,+ | |||
}} |
Latest revision as of 08:14, 1 August 2015
Short description: | p@chrX:46123210..46123229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:46123210..46123229, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.22e-21 | 1 |
lower urinary tract cell | 4.22e-21 | 1 |
epithelial cell of cervix | 2.23e-11 | 2 |
epithelial cell of gall bladder | 3.70e-11 | 2 |
pneumocyte | 6.78e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.88e-21 | 1 |
mucinous cystadenocarcinoma | 1.88e-21 | 1 |
carcinoma | 2.88e-18 | 106 |
cell type cancer | 1.96e-13 | 143 |
squamous cell carcinoma | 1.98e-13 | 14 |
clear cell adenocarcinoma | 1.82e-11 | 2 |
tubular adenocarcinoma | 2.73e-11 | 2 |
lung adenocarcinoma | 3.35e-11 | 2 |
cancer | 6.25e-08 | 235 |
adenocarcinoma | 7.14e-08 | 25 |
disease of cellular proliferation | 9.40e-08 | 239 |