FFCP PHASE1:Mm9::chr6:48720832..48720883,-: Difference between revisions
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{{FFCP|EntrezGene=83408|HGNC=|MCL_coexpression_id=40|UniProt=Q99MI6|association_with_transcript=0bp_to_NM_031247,uc009bvt.1_5end|description=CAGE_peak_1_at_Gimap3_5end|id=chr6:48720832..48720883,-|ontology_enrichment_celltype=CL:0000791!6.20e-09!9;CL:0000789!6.20e-09!9;CL:0002420!6.20e-09!9;CL:0002419!6.20e-09!9;CL:0000790!6.20e-09!9;CL:0000838!1.80e-08!12;CL:0000624!4.17e-08!8;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0000542!1.94e-07!13;CL:0000051!1.94e-07!13;CL:0002031!8.47e-07!25|ontology_enrichment_celltype_v019_2=CL:0000791,8.83e-12,9;CL:0000789,8.83e-12,9;CL:0002420,8.83e-12,9;CL:0002419,8.83e-12,9;CL:0000790,8.83e-12,9;CL:0000624,1.23e-10,8;CL:0000838,4.05e-10,12;CL:0002031,1.34e-09,25;CL:0000084,4.38e-09,11;CL:0000827,4.38e-09,11;CL:0000542,4.45e-09,13;CL:0000051,4.45e-09,13;CL:0000893,2.78e-08,6;CL:0002489,2.78e-08,6;CL:0000898,2.78e-08,6;CL:0000809,2.78e-08,6;CL:0000810,2.78e-08,6;CL:0000895,2.78e-08,6;CL:0000808,2.78e-08,6;CL:0000894,2.78e-08,6;CL:0000806,2.78e-08,6;CL:0000807,2.78e-08,6;CL:0000805,2.78e-08,6;CL:0002425,2.78e-08,6;CL:0002436,2.78e-08,6;CL:0002427,2.78e-08,6;CL:0002428,2.78e-08,6;CL:0002429,2.78e-08,6;CL:0002433,2.78e-08,6;CL:0002431,2.78e-08,6;CL:0002432,2.78e-08,6;CL:0000553,6.41e-07,6;CL:0000556,6.41e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!5.27e-15!128;UBERON:0001555!5.27e-15!128;UBERON:0007026!5.27e-15!128;UBERON:0004119!5.49e-15!130;UBERON:0000925!5.49e-15!130;UBERON:0006595!5.49e-15!130;UBERON:0004921!6.30e-14!126;UBERON:0004185!6.30e-14!126;UBERON:0007023!5.35e-11!51;UBERON:0004177!7.73e-11!29;UBERON:0002193!2.75e-10!48;UBERON:0000077!9.09e-10!97;UBERON:0002405!4.90e-09!70;UBERON:0001041!5.50e-09!92;UBERON:0002390!1.29e-08!45;UBERON:0003061!1.29e-08!45;UBERON:0005057!2.36e-08!51;UBERON:0003408!2.83e-08!24;UBERON:0006562!1.00e-07!24;UBERON:0001557!1.00e-07!24;UBERON:0001042!1.00e-07!24;UBERON:0008814!1.00e-07!24;UBERON:0009145!1.00e-07!24;UBERON:0002370!1.14e-07!23;UBERON:0000974!1.14e-07!23;UBERON:0004807!1.14e-07!23;UBERON:0005058!1.14e-07!23;UBERON:0003351!1.14e-07!23;UBERON:0009113!1.14e-07!23;UBERON:0003295!1.14e-07!23;UBERON:0009722!1.14e-07!23;UBERON:0005562!1.14e-07!23;UBERON:0007690!1.14e-07!23;UBERON:0003104!2.28e-07!131;UBERON:0009142!2.28e-07!131;UBERON:0001004!4.10e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.27e-14,118;UBERON:0000925,4.27e-14,118;UBERON:0006595,4.27e-14,118;UBERON:0001007,5.63e-14,116;UBERON:0001555,5.63e-14,116;UBERON:0007026,5.63e-14,116;UBERON:0002193,2.11e-13,48;UBERON:0002405,2.11e-13,48;UBERON:0004921,1.01e-12,114;UBERON:0004177,8.91e-12,29;UBERON:0005057,8.91e-12,29;UBERON:0007023,2.51e-11,51;UBERON:0000077,2.83e-11,35;UBERON:0002390,4.19e-11,45;UBERON:0003061,4.19e-11,45;UBERON:0003408,2.37e-09,24;UBERON:0001041,1.16e-08,80;UBERON:0002370,1.48e-08,23;UBERON:0000974,1.48e-08,23;UBERON:0004807,1.48e-08,23;UBERON:0005058,1.48e-08,23;UBERON:0003351,1.48e-08,23;UBERON:0009113,1.48e-08,23;UBERON:0003295,1.48e-08,23;UBERON:0009722,1.48e-08,23;UBERON:0005562,1.48e-08,23;UBERON:0007690,1.48e-08,23;UBERON:0001004,1.58e-08,42;UBERON:0006562,5.31e-08,24;UBERON:0001557,5.31e-08,24;UBERON:0001042,5.31e-08,24;UBERON:0008814,5.31e-08,24;UBERON:0009145,5.31e-08,24;UBERON:0000065,7.13e-08,41|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,390.468930087327,183.870071130077,78.8797453705118,75.5071239874477,48.0228397151925,381.264025556795,286.126977117378,11.3257319017325,17.6153482629149,1.39912375625629,118.456043092018,112.022492255889,136.229078227168,1.7008658030214,0.695036658406197,0,10.8794847499517,11.6998733344257,0.57423196411502,0.430761996159075,0,3.6104449696711,7.56090389279792,3.10422714917427,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.0929555140553,179.164449076802,141.495489438977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,2.72614295999463,0,0,2.58127163094416,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,4.79572294820052,124.808059917937,6.97678053604676,0,0,0,0,0,0.502666365318702,0.247194967734374,4.62717942143717,6.19227386364912,0,1.54589062922275,2.90925151881133,5.59175283654366,0,0,13.7946809812639,0,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,0,4.35424397135326,1.51633655060205,0.631325567659422,0,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.891756905004413,0.438599962275997,2.19550115291051,0.805238512562231,0,0,29.407271685558,3.43785736662608,0,0,0,0.201683524623343,0,0.380451252225118,4.74529061544512,0,2.26201687920243,2.58643413653496,3.31438948102504,5.39291645192533,4.53889904736858,5.57595565112228,0,0,0,0,0.193952487167626,0,0.442655759869801,1.03327103585722,1.09899109488962,0.616985819609003,3.55743152504579,0,0,0,0,0,0.25462585178142,0,1.29708181420028,0.823684239564244,1.43768206527355,3.34926852901653,1.87222603868736,0.505157755894224,1.79397413521912,2.8946611281802,25.3111870528248,0,0,0,0,0,0.238043640886014,0,2.52216230569906,1.10732344824387,5.26200736569707,12.9452018625433,12.6060036762104,10.5593812764503,0,0,4.91764273019036,5.51873492609465,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.642642632843614,2.6968616189571,0,0.162886959353576,3.29940245945071,6.63725691699814,0,0,0,0,0,0.258428293168221,0.727067458955011,1.06949213515416,8.53299246426703,0,3.09406629744561,1.70219802876894,0,0,0,0,0,0,0,1.17335854031855,0,1.10264199027481,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,5.24665505933731,0.18542530201051,44.9390416498353,0.82554747185289,1.85194527369712,12.9974235333237,24.1948783066215,39.3498457915219,0.509935289981566,0.419854356970974,0.138199973804424,1.90934123603023,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,2.07383957266869,13.6694648879124,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,18.3286449964343,0,0,0.77952493786677,0.358053391334963,0.39736270956253,6.73094517311826,8.27061352177632,6.25991989678515,3.73413352609499,6.45287584875779,13.2542717806063,21.6476643690741,15.4277510879671,0.226730383615211,0,0,0,2.31827512838629,2.25218970541418,2.93042598827624,0.857473516316263,4.51414893631827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,1.62307484934295|short_description=p1@Gimap3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83408 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt=Q99MI6 | |||
|association_with_transcript=0bp_to_NM_031247,uc009bvt.1_5end | |||
|cluster_id=chr6:48720832..48720883,- | |||
|description=CAGE_peak_1_at_Gimap3_5end | |||
|id=chr6:48720832..48720883,- | |||
|ontology_enrichment_celltype=CL:0000791!6.20e-09!9;CL:0000789!6.20e-09!9;CL:0002420!6.20e-09!9;CL:0002419!6.20e-09!9;CL:0000790!6.20e-09!9;CL:0000838!1.80e-08!12;CL:0000624!4.17e-08!8;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0000542!1.94e-07!13;CL:0000051!1.94e-07!13;CL:0002031!8.47e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.83e-12,9;CL:0000789,8.83e-12,9;CL:0002420,8.83e-12,9;CL:0002419,8.83e-12,9;CL:0000790,8.83e-12,9;CL:0000624,1.23e-10,8;CL:0000838,4.05e-10,12;CL:0002031,1.34e-09,25;CL:0000084,4.38e-09,11;CL:0000827,4.38e-09,11;CL:0000542,4.45e-09,13;CL:0000051,4.45e-09,13;CL:0000893,2.78e-08,6;CL:0002489,2.78e-08,6;CL:0000898,2.78e-08,6;CL:0000809,2.78e-08,6;CL:0000810,2.78e-08,6;CL:0000895,2.78e-08,6;CL:0000808,2.78e-08,6;CL:0000894,2.78e-08,6;CL:0000806,2.78e-08,6;CL:0000807,2.78e-08,6;CL:0000805,2.78e-08,6;CL:0002425,2.78e-08,6;CL:0002436,2.78e-08,6;CL:0002427,2.78e-08,6;CL:0002428,2.78e-08,6;CL:0002429,2.78e-08,6;CL:0002433,2.78e-08,6;CL:0002431,2.78e-08,6;CL:0002432,2.78e-08,6;CL:0000553,6.41e-07,6;CL:0000556,6.41e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.27e-15!128;UBERON:0001555!5.27e-15!128;UBERON:0007026!5.27e-15!128;UBERON:0004119!5.49e-15!130;UBERON:0000925!5.49e-15!130;UBERON:0006595!5.49e-15!130;UBERON:0004921!6.30e-14!126;UBERON:0004185!6.30e-14!126;UBERON:0007023!5.35e-11!51;UBERON:0004177!7.73e-11!29;UBERON:0002193!2.75e-10!48;UBERON:0000077!9.09e-10!97;UBERON:0002405!4.90e-09!70;UBERON:0001041!5.50e-09!92;UBERON:0002390!1.29e-08!45;UBERON:0003061!1.29e-08!45;UBERON:0005057!2.36e-08!51;UBERON:0003408!2.83e-08!24;UBERON:0006562!1.00e-07!24;UBERON:0001557!1.00e-07!24;UBERON:0001042!1.00e-07!24;UBERON:0008814!1.00e-07!24;UBERON:0009145!1.00e-07!24;UBERON:0002370!1.14e-07!23;UBERON:0000974!1.14e-07!23;UBERON:0004807!1.14e-07!23;UBERON:0005058!1.14e-07!23;UBERON:0003351!1.14e-07!23;UBERON:0009113!1.14e-07!23;UBERON:0003295!1.14e-07!23;UBERON:0009722!1.14e-07!23;UBERON:0005562!1.14e-07!23;UBERON:0007690!1.14e-07!23;UBERON:0003104!2.28e-07!131;UBERON:0009142!2.28e-07!131;UBERON:0001004!4.10e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.27e-14,118;UBERON:0000925,4.27e-14,118;UBERON:0006595,4.27e-14,118;UBERON:0001007,5.63e-14,116;UBERON:0001555,5.63e-14,116;UBERON:0007026,5.63e-14,116;UBERON:0002193,2.11e-13,48;UBERON:0002405,2.11e-13,48;UBERON:0004921,1.01e-12,114;UBERON:0004177,8.91e-12,29;UBERON:0005057,8.91e-12,29;UBERON:0007023,2.51e-11,51;UBERON:0000077,2.83e-11,35;UBERON:0002390,4.19e-11,45;UBERON:0003061,4.19e-11,45;UBERON:0003408,2.37e-09,24;UBERON:0001041,1.16e-08,80;UBERON:0002370,1.48e-08,23;UBERON:0000974,1.48e-08,23;UBERON:0004807,1.48e-08,23;UBERON:0005058,1.48e-08,23;UBERON:0003351,1.48e-08,23;UBERON:0009113,1.48e-08,23;UBERON:0003295,1.48e-08,23;UBERON:0009722,1.48e-08,23;UBERON:0005562,1.48e-08,23;UBERON:0007690,1.48e-08,23;UBERON:0001004,1.58e-08,42;UBERON:0006562,5.31e-08,24;UBERON:0001557,5.31e-08,24;UBERON:0001042,5.31e-08,24;UBERON:0008814,5.31e-08,24;UBERON:0009145,5.31e-08,24;UBERON:0000065,7.13e-08,41 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,390.468930087327,183.870071130077,78.8797453705118,75.5071239874477,48.0228397151925,381.264025556795,286.126977117378,11.3257319017325,17.6153482629149,1.39912375625629,118.456043092018,112.022492255889,136.229078227168,1.7008658030214,0.695036658406197,0,10.8794847499517,11.6998733344257,0.57423196411502,0.430761996159075,0,3.6104449696711,7.56090389279792,3.10422714917427,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.0929555140553,179.164449076802,141.495489438977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,2.72614295999463,0,0,2.58127163094416,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,4.79572294820052,124.808059917937,6.97678053604676,0,0,0,0,0,0.502666365318702,0.247194967734374,4.62717942143717,6.19227386364912,0,1.54589062922275,2.90925151881133,5.59175283654366,0,0,13.7946809812639,0,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,0,4.35424397135326,1.51633655060205,0.631325567659422,0,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.891756905004413,0.438599962275997,2.19550115291051,0.805238512562231,0,0,29.407271685558,3.43785736662608,0,0,0,0.201683524623343,0,0.380451252225118,4.74529061544512,0,2.26201687920243,2.58643413653496,3.31438948102504,5.39291645192533,4.53889904736858,5.57595565112228,0,0,0,0,0.193952487167626,0,0.442655759869801,1.03327103585722,1.09899109488962,0.616985819609003,3.55743152504579,0,0,0,0,0,0.25462585178142,0,1.29708181420028,0.823684239564244,1.43768206527355,3.34926852901653,1.87222603868736,0.505157755894224,1.79397413521912,2.8946611281802,25.3111870528248,0,0,0,0,0,0.238043640886014,0,2.52216230569906,1.10732344824387,5.26200736569707,12.9452018625433,12.6060036762104,10.5593812764503,0,0,4.91764273019036,5.51873492609465,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.642642632843614,2.6968616189571,0,0.162886959353576,3.29940245945071,6.63725691699814,0,0,0,0,0,0.258428293168221,0.727067458955011,1.06949213515416,8.53299246426703,0,3.09406629744561,1.70219802876894,0,0,0,0,0,0,0,1.17335854031855,0,1.10264199027481,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,5.24665505933731,0.18542530201051,44.9390416498353,0.82554747185289,1.85194527369712,12.9974235333237,24.1948783066215,39.3498457915219,0.509935289981566,0.419854356970974,0.138199973804424,1.90934123603023,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,2.07383957266869,13.6694648879124,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,18.3286449964343,0,0,0.77952493786677,0.358053391334963,0.39736270956253,6.73094517311826,8.27061352177632,6.25991989678515,3.73413352609499,6.45287584875779,13.2542717806063,21.6476643690741,15.4277510879671,0.226730383615211,0,0,0,2.31827512838629,2.25218970541418,2.93042598827624,0.857473516316263,4.51414893631827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,1.62307484934295 | |||
|short_description=p1@Gimap3 | |||
}} |
Latest revision as of 07:55, 27 September 2015
Short description: | p1@Gimap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gimap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 0bp_to_NM_031247, uc009bvt.1_5end |
EntrezGene: | Gimap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.27e-14 | 118 |
endoderm | 4.27e-14 | 118 |
presumptive endoderm | 4.27e-14 | 118 |
digestive system | 5.63e-14 | 116 |
digestive tract | 5.63e-14 | 116 |
primitive gut | 5.63e-14 | 116 |
hemolymphoid system | 2.11e-13 | 48 |
immune system | 2.11e-13 | 48 |
subdivision of digestive tract | 1.01e-12 | 114 |
hemopoietic organ | 8.91e-12 | 29 |
immune organ | 8.91e-12 | 29 |
adult organism | 2.51e-11 | 51 |
mixed endoderm/mesoderm-derived structure | 2.83e-11 | 35 |
hematopoietic system | 4.19e-11 | 45 |
blood island | 4.19e-11 | 45 |
gland of gut | 2.37e-09 | 24 |
foregut | 1.16e-08 | 80 |
thymus | 1.48e-08 | 23 |
neck | 1.48e-08 | 23 |
respiratory system epithelium | 1.48e-08 | 23 |
hemolymphoid system gland | 1.48e-08 | 23 |
pharyngeal epithelium | 1.48e-08 | 23 |
thymic region | 1.48e-08 | 23 |
pharyngeal gland | 1.48e-08 | 23 |
entire pharyngeal arch endoderm | 1.48e-08 | 23 |
thymus primordium | 1.48e-08 | 23 |
early pharyngeal endoderm | 1.48e-08 | 23 |
respiratory system | 1.58e-08 | 42 |
pharynx | 5.31e-08 | 24 |
upper respiratory tract | 5.31e-08 | 24 |
chordate pharynx | 5.31e-08 | 24 |
pharyngeal arch system | 5.31e-08 | 24 |
pharyngeal region of foregut | 5.31e-08 | 24 |
respiratory tract | 7.13e-08 | 41 |