FFCP PHASE1:Mm9::chr6:41128837..41128859,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=386551|HGNC=|MCL_coexpression_id=118|UniProt=P01852|association_with_transcript=92bp_to_uc009bok.1,uc012ekr.1_5end|description=CAGE_peak_2_at_Gm5409_5end|id=chr6:41128837..41128859,+|ontology_enrichment_celltype=CL:0000791!4.47e-20!9;CL:0000789!4.47e-20!9;CL:0002420!4.47e-20!9;CL:0002419!4.47e-20!9;CL:0000790!4.47e-20!9;CL:0000624!3.17e-18!8;CL:0000084!4.84e-16!11;CL:0000827!4.84e-16!11;CL:0000838!1.57e-14!12;CL:0000893!4.27e-14!6;CL:0002489!4.27e-14!6;CL:0000898!4.27e-14!6;CL:0000809!4.27e-14!6;CL:0000810!4.27e-14!6;CL:0000895!4.27e-14!6;CL:0000808!4.27e-14!6;CL:0000894!4.27e-14!6;CL:0000806!4.27e-14!6;CL:0000807!4.27e-14!6;CL:0000805!4.27e-14!6;CL:0002425!4.27e-14!6;CL:0002436!4.27e-14!6;CL:0002427!4.27e-14!6;CL:0002428!4.27e-14!6;CL:0002429!4.27e-14!6;CL:0002433!4.27e-14!6;CL:0002431!4.27e-14!6;CL:0002432!4.27e-14!6;CL:0000542!2.99e-13!13;CL:0000051!2.99e-13!13;CL:0002031!2.03e-10!25;CL:0000738!1.19e-09!17;CL:0002087!1.19e-09!17;CL:0000988!1.62e-07!32;CL:0002032!1.62e-07!32;CL:0000037!1.62e-07!32;CL:0000566!1.62e-07!32;CL:0000837!1.62e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,4.03e-39,9;CL:0000789,4.03e-39,9;CL:0002420,4.03e-39,9;CL:0002419,4.03e-39,9;CL:0000790,4.03e-39,9;CL:0000624,2.37e-35,8;CL:0000084,8.75e-32,11;CL:0000827,8.75e-32,11;CL:0000838,4.96e-29,12;CL:0000893,6.02e-27,6;CL:0002489,6.02e-27,6;CL:0000898,6.02e-27,6;CL:0000809,6.02e-27,6;CL:0000810,6.02e-27,6;CL:0000895,6.02e-27,6;CL:0000808,6.02e-27,6;CL:0000894,6.02e-27,6;CL:0000806,6.02e-27,6;CL:0000807,6.02e-27,6;CL:0000805,6.02e-27,6;CL:0002425,6.02e-27,6;CL:0002436,6.02e-27,6;CL:0002427,6.02e-27,6;CL:0002428,6.02e-27,6;CL:0002429,6.02e-27,6;CL:0002433,6.02e-27,6;CL:0002431,6.02e-27,6;CL:0002432,6.02e-27,6;CL:0000542,1.06e-26,13;CL:0000051,1.06e-26,13;CL:0000738,4.10e-20,17;CL:0002087,4.10e-20,17;CL:0002031,3.00e-13,25;CL:0000988,4.73e-10,32;CL:0002032,4.73e-10,32;CL:0000037,4.73e-10,32;CL:0000837,4.73e-10,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.10e-37!29;UBERON:0003408!4.17e-36!24;UBERON:0002370!2.66e-34!23;UBERON:0000974!2.66e-34!23;UBERON:0004807!2.66e-34!23;UBERON:0005058!2.66e-34!23;UBERON:0003351!2.66e-34!23;UBERON:0009113!2.66e-34!23;UBERON:0003295!2.66e-34!23;UBERON:0009722!2.66e-34!23;UBERON:0005562!2.66e-34!23;UBERON:0007690!2.66e-34!23;UBERON:0006562!1.22e-32!24;UBERON:0001557!1.22e-32!24;UBERON:0001042!1.22e-32!24;UBERON:0008814!1.22e-32!24;UBERON:0009145!1.22e-32!24;UBERON:0002193!1.37e-30!48;UBERON:0002390!1.74e-28!45;UBERON:0003061!1.74e-28!45;UBERON:0000072!2.13e-28!27;UBERON:0001004!4.99e-24!42;UBERON:0000065!1.53e-22!41;UBERON:0000063!1.18e-20!35;UBERON:0005057!1.19e-18!51;UBERON:0002405!1.25e-18!70;UBERON:0003081!2.07e-14!88;UBERON:0001041!2.70e-12!92;UBERON:0000077!2.72e-11!97;UBERON:0003929!3.28e-11!55;UBERON:0005911!5.95e-11!69;UBERON:0002368!7.54e-10!60;UBERON:0002530!8.53e-10!65;UBERON:0000064!4.62e-09!99;UBERON:0000490!1.70e-08!66;UBERON:0001007!2.88e-08!128;UBERON:0001555!2.88e-08!128;UBERON:0007026!2.88e-08!128;UBERON:0004119!5.01e-08!130;UBERON:0000925!5.01e-08!130;UBERON:0006595!5.01e-08!130;UBERON:0004921!8.64e-08!126;UBERON:0004185!8.64e-08!126;UBERON:0000949!2.22e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.31e-57,23;UBERON:0000974,4.31e-57,23;UBERON:0004807,4.31e-57,23;UBERON:0005058,4.31e-57,23;UBERON:0003351,4.31e-57,23;UBERON:0009113,4.31e-57,23;UBERON:0003295,4.31e-57,23;UBERON:0009722,4.31e-57,23;UBERON:0005562,4.31e-57,23;UBERON:0007690,4.31e-57,23;UBERON:0006562,1.32e-54,24;UBERON:0003408,1.32e-54,24;UBERON:0001557,1.32e-54,24;UBERON:0001042,1.32e-54,24;UBERON:0008814,1.32e-54,24;UBERON:0009145,1.32e-54,24;UBERON:0000072,3.02e-48,27;UBERON:0004177,9.76e-45,29;UBERON:0005057,9.76e-45,29;UBERON:0000077,1.31e-36,35;UBERON:0007811,1.62e-35,36;UBERON:0000065,7.46e-31,41;UBERON:0001004,4.70e-30,42;UBERON:0000153,2.72e-29,43;UBERON:0002390,7.24e-28,45;UBERON:0003061,7.24e-28,45;UBERON:0002193,5.95e-26,48;UBERON:0002405,5.95e-26,48;UBERON:0003929,2.71e-22,55;UBERON:0002368,3.36e-20,60;UBERON:0002530,1.99e-18,65;UBERON:0000490,4.19e-18,66;UBERON:0005911,3.42e-17,69;UBERON:0000949,2.35e-16,72;UBERON:0001041,1.98e-14,80;UBERON:0003081,4.94e-13,87;UBERON:0004921,3.09e-09,114;UBERON:0001007,5.02e-09,116;UBERON:0001555,5.02e-09,116;UBERON:0007026,5.02e-09,116;UBERON:0004119,8.05e-09,118;UBERON:0000925,8.05e-09,118;UBERON:0006595,8.05e-09,118;UBERON:0000926,1.27e-08,120;UBERON:0004120,1.27e-08,120;UBERON:0006603,1.27e-08,120;UBERON:0001048,2.12e-07,134|phase1_expression=0,0,0,0,0,0,0,10.7172358456508,23.0893504328733,34.875614421977,20.8885921235116,20.4216727028061,8.56003649656029,8.13009742496676,0,0.202475267389826,0,0.630924330716475,0.548457734422955,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0565185562042,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.318909537314974,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,5.68820017130721,0.202725215290164,0.410843828659309,3.24802057444488,7.51912121803422,5.76175928865668,8.29348601687785,5.02144392393563,8.07731599585181,4.49620159264499,7.36031151498936,6.1398464866044,5.77271049841977,4.67507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p2@Gm5409}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=386551 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt=P01852 | |||
|association_with_transcript=92bp_to_uc009bok.1,uc012ekr.1_5end | |||
|cluster_id=chr6:41128837..41128859,+ | |||
|description=CAGE_peak_2_at_Gm5409_5end | |||
|id=chr6:41128837..41128859,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.47e-20!9;CL:0000789!4.47e-20!9;CL:0002420!4.47e-20!9;CL:0002419!4.47e-20!9;CL:0000790!4.47e-20!9;CL:0000624!3.17e-18!8;CL:0000084!4.84e-16!11;CL:0000827!4.84e-16!11;CL:0000838!1.57e-14!12;CL:0000893!4.27e-14!6;CL:0002489!4.27e-14!6;CL:0000898!4.27e-14!6;CL:0000809!4.27e-14!6;CL:0000810!4.27e-14!6;CL:0000895!4.27e-14!6;CL:0000808!4.27e-14!6;CL:0000894!4.27e-14!6;CL:0000806!4.27e-14!6;CL:0000807!4.27e-14!6;CL:0000805!4.27e-14!6;CL:0002425!4.27e-14!6;CL:0002436!4.27e-14!6;CL:0002427!4.27e-14!6;CL:0002428!4.27e-14!6;CL:0002429!4.27e-14!6;CL:0002433!4.27e-14!6;CL:0002431!4.27e-14!6;CL:0002432!4.27e-14!6;CL:0000542!2.99e-13!13;CL:0000051!2.99e-13!13;CL:0002031!2.03e-10!25;CL:0000738!1.19e-09!17;CL:0002087!1.19e-09!17;CL:0000988!1.62e-07!32;CL:0002032!1.62e-07!32;CL:0000037!1.62e-07!32;CL:0000566!1.62e-07!32;CL:0000837!1.62e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.03e-39,9;CL:0000789,4.03e-39,9;CL:0002420,4.03e-39,9;CL:0002419,4.03e-39,9;CL:0000790,4.03e-39,9;CL:0000624,2.37e-35,8;CL:0000084,8.75e-32,11;CL:0000827,8.75e-32,11;CL:0000838,4.96e-29,12;CL:0000893,6.02e-27,6;CL:0002489,6.02e-27,6;CL:0000898,6.02e-27,6;CL:0000809,6.02e-27,6;CL:0000810,6.02e-27,6;CL:0000895,6.02e-27,6;CL:0000808,6.02e-27,6;CL:0000894,6.02e-27,6;CL:0000806,6.02e-27,6;CL:0000807,6.02e-27,6;CL:0000805,6.02e-27,6;CL:0002425,6.02e-27,6;CL:0002436,6.02e-27,6;CL:0002427,6.02e-27,6;CL:0002428,6.02e-27,6;CL:0002429,6.02e-27,6;CL:0002433,6.02e-27,6;CL:0002431,6.02e-27,6;CL:0002432,6.02e-27,6;CL:0000542,1.06e-26,13;CL:0000051,1.06e-26,13;CL:0000738,4.10e-20,17;CL:0002087,4.10e-20,17;CL:0002031,3.00e-13,25;CL:0000988,4.73e-10,32;CL:0002032,4.73e-10,32;CL:0000037,4.73e-10,32;CL:0000837,4.73e-10,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.10e-37!29;UBERON:0003408!4.17e-36!24;UBERON:0002370!2.66e-34!23;UBERON:0000974!2.66e-34!23;UBERON:0004807!2.66e-34!23;UBERON:0005058!2.66e-34!23;UBERON:0003351!2.66e-34!23;UBERON:0009113!2.66e-34!23;UBERON:0003295!2.66e-34!23;UBERON:0009722!2.66e-34!23;UBERON:0005562!2.66e-34!23;UBERON:0007690!2.66e-34!23;UBERON:0006562!1.22e-32!24;UBERON:0001557!1.22e-32!24;UBERON:0001042!1.22e-32!24;UBERON:0008814!1.22e-32!24;UBERON:0009145!1.22e-32!24;UBERON:0002193!1.37e-30!48;UBERON:0002390!1.74e-28!45;UBERON:0003061!1.74e-28!45;UBERON:0000072!2.13e-28!27;UBERON:0001004!4.99e-24!42;UBERON:0000065!1.53e-22!41;UBERON:0000063!1.18e-20!35;UBERON:0005057!1.19e-18!51;UBERON:0002405!1.25e-18!70;UBERON:0003081!2.07e-14!88;UBERON:0001041!2.70e-12!92;UBERON:0000077!2.72e-11!97;UBERON:0003929!3.28e-11!55;UBERON:0005911!5.95e-11!69;UBERON:0002368!7.54e-10!60;UBERON:0002530!8.53e-10!65;UBERON:0000064!4.62e-09!99;UBERON:0000490!1.70e-08!66;UBERON:0001007!2.88e-08!128;UBERON:0001555!2.88e-08!128;UBERON:0007026!2.88e-08!128;UBERON:0004119!5.01e-08!130;UBERON:0000925!5.01e-08!130;UBERON:0006595!5.01e-08!130;UBERON:0004921!8.64e-08!126;UBERON:0004185!8.64e-08!126;UBERON:0000949!2.22e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.31e-57,23;UBERON:0000974,4.31e-57,23;UBERON:0004807,4.31e-57,23;UBERON:0005058,4.31e-57,23;UBERON:0003351,4.31e-57,23;UBERON:0009113,4.31e-57,23;UBERON:0003295,4.31e-57,23;UBERON:0009722,4.31e-57,23;UBERON:0005562,4.31e-57,23;UBERON:0007690,4.31e-57,23;UBERON:0006562,1.32e-54,24;UBERON:0003408,1.32e-54,24;UBERON:0001557,1.32e-54,24;UBERON:0001042,1.32e-54,24;UBERON:0008814,1.32e-54,24;UBERON:0009145,1.32e-54,24;UBERON:0000072,3.02e-48,27;UBERON:0004177,9.76e-45,29;UBERON:0005057,9.76e-45,29;UBERON:0000077,1.31e-36,35;UBERON:0007811,1.62e-35,36;UBERON:0000065,7.46e-31,41;UBERON:0001004,4.70e-30,42;UBERON:0000153,2.72e-29,43;UBERON:0002390,7.24e-28,45;UBERON:0003061,7.24e-28,45;UBERON:0002193,5.95e-26,48;UBERON:0002405,5.95e-26,48;UBERON:0003929,2.71e-22,55;UBERON:0002368,3.36e-20,60;UBERON:0002530,1.99e-18,65;UBERON:0000490,4.19e-18,66;UBERON:0005911,3.42e-17,69;UBERON:0000949,2.35e-16,72;UBERON:0001041,1.98e-14,80;UBERON:0003081,4.94e-13,87;UBERON:0004921,3.09e-09,114;UBERON:0001007,5.02e-09,116;UBERON:0001555,5.02e-09,116;UBERON:0007026,5.02e-09,116;UBERON:0004119,8.05e-09,118;UBERON:0000925,8.05e-09,118;UBERON:0006595,8.05e-09,118;UBERON:0000926,1.27e-08,120;UBERON:0004120,1.27e-08,120;UBERON:0006603,1.27e-08,120;UBERON:0001048,2.12e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,10.7172358456508,23.0893504328733,34.875614421977,20.8885921235116,20.4216727028061,8.56003649656029,8.13009742496676,0,0.202475267389826,0,0.630924330716475,0.548457734422955,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0565185562042,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.318909537314974,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,5.68820017130721,0.202725215290164,0.410843828659309,3.24802057444488,7.51912121803422,5.76175928865668,8.29348601687785,5.02144392393563,8.07731599585181,4.49620159264499,7.36031151498936,6.1398464866044,5.77271049841977,4.67507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Gm5409 | |||
}} |
Latest revision as of 04:54, 27 September 2015
Short description: | p2@Gm5409 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm5409_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 92bp_to_uc009bok.1, uc012ekr.1_5end |
EntrezGene: | Gm5409 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data