FFCP PHASE1:Hg19::chr8:24772490..24772535,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7734 | |||
|TSSclassifier=strong | |||
|UniProt=E9PBF7,Q9UK51 | |||
|association_with_transcript=35bp_to_ENST00000433454,NM_001105541,uc010lue.2_5end | |||
|cluster_id=chr8:24772490..24772535,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_NEFM_5end | |||
|id=chr8:24772490..24772535,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.62e-17;82!UBERON:0010122;2.46e-11;2!UBERON:0006215;5.82e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.05e-72!57;UBERON:0005068!4.05e-72!57;UBERON:0006241!4.05e-72!57;UBERON:0007135!4.05e-72!57;UBERON:0001017!4.10e-66!82;UBERON:0005743!1.50e-64!86;UBERON:0002616!4.95e-60!59;UBERON:0000073!3.36e-59!94;UBERON:0001016!3.36e-59!94;UBERON:0002780!1.80e-57!41;UBERON:0001890!1.80e-57!41;UBERON:0006240!1.80e-57!41;UBERON:0000955!3.62e-56!69;UBERON:0006238!3.62e-56!69;UBERON:0003080!7.56e-56!42;UBERON:0003075!3.93e-53!86;UBERON:0007284!3.93e-53!86;UBERON:0002020!4.91e-52!34;UBERON:0003528!4.91e-52!34;UBERON:0001893!6.90e-52!34;UBERON:0002346!4.64e-50!90;UBERON:0002791!6.72e-50!33;UBERON:0001869!3.95e-49!32;UBERON:0002619!4.35e-41!22;UBERON:0007023!1.32e-39!115;UBERON:0003056!4.57e-39!61;UBERON:0001950!3.30e-37!20;UBERON:0000956!1.74e-35!25;UBERON:0000203!1.74e-35!25;UBERON:0000033!5.16e-35!123;UBERON:0004121!8.89e-33!169;UBERON:0000153!1.20e-32!129;UBERON:0007811!1.20e-32!129;UBERON:0000924!1.32e-31!173;UBERON:0006601!1.32e-31!173;UBERON:0002420!1.96e-18!9;UBERON:0007245!1.96e-18!9;UBERON:0010009!1.96e-18!9;UBERON:0010011!1.96e-18!9;UBERON:0000454!1.96e-18!9;UBERON:0002308!5.44e-18!9;UBERON:0000125!5.44e-18!9;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0000025!4.61e-15!194;UBERON:0009663!1.46e-14!7;UBERON:0000200!2.76e-13!6;UBERON:0001871!1.48e-12!7;UBERON:0004733!5.73e-12!12;UBERON:0002028!5.73e-12!12;UBERON:0007277!5.73e-12!12;UBERON:0000349!2.20e-11!5;UBERON:0001872!3.26e-11!5;UBERON:0002298!3.49e-11!8;UBERON:0002021!6.12e-11!5;UBERON:0004732!6.80e-11!13;UBERON:0004111!5.26e-10!241;UBERON:0000369!8.69e-10!4;UBERON:0002435!8.69e-10!4;UBERON:0000204!8.69e-10!4;UBERON:0010082!8.69e-10!4;UBERON:0000483!1.49e-09!309;UBERON:0000119!2.59e-09!312;UBERON:0000064!2.77e-09!219;UBERON:0000477!9.04e-09!286;UBERON:0000475!4.25e-08!365;UBERON:0005383!8.93e-08!3;UBERON:0005382!8.93e-08!3;UBERON:0002680!1.40e-07!9;UBERON:0001895!1.40e-07!9;UBERON:0010092!1.40e-07!9;UBERON:0002771!2.30e-07!3;UBERON:0001894!2.83e-07!7;UBERON:0006222!2.83e-07!7;UBERON:0000988!7.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.44e-91;32!UBERON:0003528;6.83e-89;34!UBERON:0002020;6.83e-89;34!UBERON:0001893;6.45e-85;34!UBERON:0002791;6.76e-85;32!UBERON:0002619;6.83e-81;22!UBERON:0001950;1.04e-71;20!UBERON:0000956;5.10e-71;25!UBERON:0000203;5.10e-71;25!UBERON:0002780;8.86e-70;41!UBERON:0001890;8.86e-70;41!UBERON:0000073;2.55e-56;53!UBERON:0002616;2.55e-56;53!UBERON:0000955;6.08e-40;68!UBERON:0001017;3.22e-37;75!UBERON:0002420;3.09e-34;9!UBERON:0007245;3.09e-34;9!UBERON:0010009;3.09e-34;9!UBERON:0010011;3.09e-34;9!UBERON:0000454;3.09e-34;9!UBERON:0000125;1.89e-33;9!UBERON:0002308;1.89e-33;9!UBERON:0000200;2.53e-29;6!UBERON:0001016;1.13e-27;83!UBERON:0009663;3.20e-25;7!UBERON:0000349;8.72e-25;5!UBERON:0001872;3.57e-24;5!UBERON:0000369;5.55e-21;4!UBERON:0002435;5.55e-21;4!UBERON:0000204;5.55e-21;4!UBERON:0001871;2.36e-17;6!UBERON:0005383;2.98e-16;3!UBERON:0005382;2.98e-16;3!UBERON:0002021;3.73e-16;5!UBERON:0007023;4.66e-16;114!UBERON:0001870;6.96e-16;3!UBERON:0000988;3.53e-14;3!UBERON:0004733;4.71e-13;12!UBERON:0002028;4.71e-13;12!UBERON:0002680;2.08e-12;9!UBERON:0001895;2.08e-12;9!UBERON:0002298;2.81e-12;6!UBERON:0004732;5.22e-12;13!UBERON:0001873;2.46e-11;2!UBERON:0002702;4.38e-11;2!UBERON:0011216;4.52e-11;132!UBERON:0001876;6.67e-11;2!UBERON:0001954;6.67e-11;2!UBERON:0003022;6.67e-11;2!UBERON:0002421;6.67e-11;2!UBERON:0002600;6.67e-11;2!UBERON:0002771;8.53e-11;2!UBERON:0001875;2.59e-10;2!UBERON:0006514;2.59e-10;2!UBERON:0002148;5.04e-10;2!UBERON:0006331;5.04e-10;2!UBERON:0009662;5.04e-10;2!UBERON:0010314;3.50e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-109,53;UBERON:0002616,4.16e-109,53;UBERON:0003528,2.24e-103,34;UBERON:0002020,2.24e-103,34;UBERON:0001049,5.44e-103,56;UBERON:0005068,5.44e-103,56;UBERON:0006241,5.44e-103,56;UBERON:0007135,5.44e-103,56;UBERON:0001869,6.80e-103,32;UBERON:0002780,7.75e-99,41;UBERON:0001890,7.75e-99,41;UBERON:0003080,7.75e-99,41;UBERON:0006240,7.75e-99,41;UBERON:0001893,1.15e-96,34;UBERON:0002791,4.40e-95,32;UBERON:0000955,1.11e-92,68;UBERON:0006238,1.11e-92,68;UBERON:0001017,1.82e-81,81;UBERON:0002619,7.46e-81,22;UBERON:0001016,8.87e-73,89;UBERON:0001950,9.58e-72,20;UBERON:0000956,5.52e-71,25;UBERON:0000203,5.52e-71,25;UBERON:0003075,1.74e-68,82;UBERON:0007284,1.74e-68,82;UBERON:0002346,5.25e-65,86;UBERON:0003056,7.71e-65,61;UBERON:0010371,8.77e-56,104;UBERON:0007023,3.92e-54,114;UBERON:0010314,1.37e-42,132;UBERON:0004121,4.79e-37,171;UBERON:0000924,4.79e-37,171;UBERON:0006601,4.79e-37,171;UBERON:0002420,3.23e-34,9;UBERON:0007245,3.23e-34,9;UBERON:0010009,3.23e-34,9;UBERON:0010011,3.23e-34,9;UBERON:0000454,3.23e-34,9;UBERON:0000125,2.90e-33,9;UBERON:0002308,2.90e-33,9;UBERON:0000200,2.66e-29,6;UBERON:0011216,2.38e-28,223;UBERON:0000025,2.76e-25,192;UBERON:0009663,3.79e-25,7;UBERON:0000349,8.73e-25,5;UBERON:0001872,2.20e-24,5;UBERON:0000369,5.28e-21,4;UBERON:0002435,5.28e-21,4;UBERON:0000204,5.28e-21,4;UBERON:0010082,5.28e-21,4;UBERON:0004111,9.04e-19,240;UBERON:0001871,2.24e-17,6;UBERON:0005383,2.98e-16,3;UBERON:0005382,2.98e-16,3;UBERON:0002021,4.63e-16,5;UBERON:0001870,7.32e-16,3;UBERON:0000483,3.70e-14,306;UBERON:0000988,4.15e-14,3;UBERON:0000119,6.02e-14,309;UBERON:0004733,4.93e-13,12;UBERON:0002028,4.93e-13,12;UBERON:0007277,4.93e-13,12;UBERON:0002680,2.16e-12,9;UBERON:0001895,2.16e-12,9;UBERON:0010092,2.16e-12,9;UBERON:0002298,3.17e-12,6;UBERON:0004732,5.44e-12,13;UBERON:0001873,2.46e-11,2;UBERON:0010122,2.46e-11,2;UBERON:0002702,4.72e-11,2;UBERON:0001876,5.75e-11,2;UBERON:0001954,8.12e-11,2;UBERON:0003022,8.12e-11,2;UBERON:0002421,8.12e-11,2;UBERON:0002600,8.12e-11,2;UBERON:0002771,9.41e-11,2;UBERON:0003076,2.54e-10,15;UBERON:0003057,2.54e-10,15;UBERON:0001875,3.29e-10,2;UBERON:0006514,3.29e-10,2;UBERON:0002148,6.67e-10,2;UBERON:0006331,6.67e-10,2;UBERON:0009662,6.67e-10,2;UBERON:0000923,2.55e-07,560;UBERON:0010316,2.55e-07,560;UBERON:0005291,2.55e-07,560;UBERON:0006598,2.55e-07,560;UBERON:0010317,2.55e-07,560;UBERON:0002532,2.55e-07,560;UBERON:0002050,3.28e-07,564;UBERON:0005423,9.24e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.580969714347592,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,5.56608588971108,0,0,0,0,0,0,0,0.689486746482929,0,0,9.74315524395223,6.87399700164825,1.52581736317083,1.54810963903714,0.295547618953547,3.72955175161753,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,4.68528891450678,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0.451961481561065,0,0,7.78722790257308,0.391102765469606,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,3.00210144354895,1.09524303113594,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,9.54275627771164,2.17925449778521,0.160753148465019,0.412618309791701,0,0,0,4.07022029608765,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,7.08854543973589,6.46739203980405,4.38168257472749,0.573409195690071,0.332787154610557,1.30402446176905,0.276697269872462,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764467467344097,0,0,0,0,0,0,0,0,0,6.93675631041763,11.3357261060468,2.55414174491442,4.30744364905586,0.504143392443436,5.18679393481634,3.39098855826887,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,5.26793160023478,4.68646859168308,5.99391709853434,4.56593833396129,1.64092442705466,0,0,0,0,0.535701835878287,2.69026977775059,0,0.455324382702595,0,0,0,1.56330385846713,4.73563969652513,0,0,0,13.3548251428602,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769583617218004,0,0,0,0,0,0,0.588925401344836,0.891139200981258,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,3.60354898011848,1.74540276136151,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,2.99955687999496,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@NEFM | |||
}} |
Latest revision as of 15:38, 17 September 2015
Short description: | p12@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NEFM_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 35bp_to_ENST00000433454, NM_001105541, uc010lue.2_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | E9PBF7Q9UK51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data