FFCP PHASE1:Mm9::chr3:58902298..58902304,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=601|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:58902298..58902304,-|id=chr3:58902298..58902304,-|ontology_enrichment_celltype=CL:0000988!1.26e-15!32;CL:0002032!1.26e-15!32;CL:0000037!1.26e-15!32;CL:0000566!1.26e-15!32;CL:0000837!1.26e-15!32;CL:0000838!1.63e-13!12;CL:0000084!1.79e-12!11;CL:0000827!1.79e-12!11;CL:0000542!4.09e-12!13;CL:0000051!4.09e-12!13;CL:0002031!2.51e-11!25;CL:0000791!2.76e-10!9;CL:0000789!2.76e-10!9;CL:0002420!2.76e-10!9;CL:0002419!2.76e-10!9;CL:0000790!2.76e-10!9;CL:0000624!2.51e-09!8;CL:0000738!3.22e-08!17;CL:0002087!3.22e-08!17;CL:0002320!3.43e-08!46;CL:0000134!3.43e-08!46;CL:0000893!1.28e-07!6;CL:0002489!1.28e-07!6;CL:0000898!1.28e-07!6;CL:0000809!1.28e-07!6;CL:0000810!1.28e-07!6;CL:0000895!1.28e-07!6;CL:0000808!1.28e-07!6;CL:0000894!1.28e-07!6;CL:0000806!1.28e-07!6;CL:0000807!1.28e-07!6;CL:0000805!1.28e-07!6;CL:0002425!1.28e-07!6;CL:0002436!1.28e-07!6;CL:0002427!1.28e-07!6;CL:0002428!1.28e-07!6;CL:0002429!1.28e-07!6;CL:0002433!1.28e-07!6;CL:0002431!1.28e-07!6;CL:0002432!1.28e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,5.63e-27,32;CL:0002032,5.63e-27,32;CL:0000037,5.63e-27,32;CL:0000837,5.63e-27,32;CL:0000838,4.01e-24,12;CL:0000084,3.75e-22,11;CL:0000827,3.75e-22,11;CL:0000542,5.04e-22,13;CL:0000051,5.04e-22,13;CL:0002031,1.50e-18,25;CL:0000791,5.13e-18,9;CL:0000789,5.13e-18,9;CL:0002420,5.13e-18,9;CL:0002419,5.13e-18,9;CL:0000790,5.13e-18,9;CL:0002320,6.40e-17,46;CL:0000134,6.40e-17,46;CL:0000624,3.29e-16,8;CL:0000738,4.20e-16,17;CL:0002087,4.20e-16,17;CL:0000219,1.55e-13,54;CL:0000893,5.43e-13,6;CL:0002489,5.43e-13,6;CL:0000898,5.43e-13,6;CL:0000809,5.43e-13,6;CL:0000810,5.43e-13,6;CL:0000895,5.43e-13,6;CL:0000808,5.43e-13,6;CL:0000894,5.43e-13,6;CL:0000806,5.43e-13,6;CL:0000807,5.43e-13,6;CL:0000805,5.43e-13,6;CL:0002425,5.43e-13,6;CL:0002436,5.43e-13,6;CL:0002427,5.43e-13,6;CL:0002428,5.43e-13,6;CL:0002429,5.43e-13,6;CL:0002433,5.43e-13,6;CL:0002431,5.43e-13,6;CL:0002432,5.43e-13,6;CL:0000049,8.44e-09,19;CL:0000034,2.02e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.21e-23!48;UBERON:0002390!1.83e-20!45;UBERON:0003061!1.83e-20!45;UBERON:0004177!8.57e-19!29;UBERON:0002405!4.39e-18!70;UBERON:0003408!2.55e-15!24;UBERON:0006562!4.39e-15!24;UBERON:0001557!4.39e-15!24;UBERON:0001042!4.39e-15!24;UBERON:0008814!4.39e-15!24;UBERON:0009145!4.39e-15!24;UBERON:0002370!1.26e-14!23;UBERON:0000974!1.26e-14!23;UBERON:0004807!1.26e-14!23;UBERON:0005058!1.26e-14!23;UBERON:0003351!1.26e-14!23;UBERON:0009113!1.26e-14!23;UBERON:0003295!1.26e-14!23;UBERON:0009722!1.26e-14!23;UBERON:0005562!1.26e-14!23;UBERON:0007690!1.26e-14!23;UBERON:0005057!1.28e-12!51;UBERON:0000072!1.49e-12!27;UBERON:0001004!3.09e-11!42;UBERON:0000065!1.21e-10!41;UBERON:0003081!5.68e-10!88;UBERON:0000063!7.79e-10!35;UBERON:0001041!2.16e-09!92;UBERON:0000077!3.14e-08!97;UBERON:0002384!3.43e-08!46;UBERON:0001007!2.39e-07!128;UBERON:0001555!2.39e-07!128;UBERON:0007026!2.39e-07!128;UBERON:0004119!5.18e-07!130;UBERON:0000925!5.18e-07!130;UBERON:0006595!5.18e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-33,48;UBERON:0002405,1.14e-33,48;UBERON:0002390,7.70e-29,45;UBERON:0003061,7.70e-29,45;UBERON:0004177,5.01e-26,29;UBERON:0005057,5.01e-26,29;UBERON:0003408,4.92e-24,24;UBERON:0002370,9.53e-23,23;UBERON:0000974,9.53e-23,23;UBERON:0004807,9.53e-23,23;UBERON:0005058,9.53e-23,23;UBERON:0003351,9.53e-23,23;UBERON:0009113,9.53e-23,23;UBERON:0003295,9.53e-23,23;UBERON:0009722,9.53e-23,23;UBERON:0005562,9.53e-23,23;UBERON:0007690,9.53e-23,23;UBERON:0006562,1.32e-21,24;UBERON:0001557,1.32e-21,24;UBERON:0001042,1.32e-21,24;UBERON:0008814,1.32e-21,24;UBERON:0009145,1.32e-21,24;UBERON:0000077,1.38e-20,35;UBERON:0000072,1.09e-18,27;UBERON:0002384,6.40e-17,46;UBERON:0007811,2.11e-14,36;UBERON:0001004,4.92e-13,42;UBERON:0000065,4.37e-12,41;UBERON:0003081,2.10e-11,87;UBERON:0000153,2.72e-11,43;UBERON:0001041,2.42e-08,80;UBERON:0003929,6.89e-08,55;UBERON:0002368,7.19e-07,60;UBERON:0002530,8.83e-07,65|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,41.5326730347417,40.7272275800269,15.7520530767465,13.4814948702119,4.79362043807376,3.75907730401689,0.666219523631325,2.02475267389826,0.699561878128147,6.78243655520211,8.36398044995006,14.004858509335,0.0850432901510698,56.0993874285002,18.2839852397255,3.19984845586813,2.75291137280604,0,0,0,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5769998179838,2.90144856804538,6.04968838456435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,8.02707439306232,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,1.27728527604296,8.74650408893218,4.79922184794726,5.20987930999565,0.149790639404823,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,4.91549231119264,2.31613116403244,1.42081749697796,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,1.29327233116623,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,1.36696704638282,0.619160603889667,0.370389054739423,1.13021074202815,1.6403307326523,2.0590035588587,5.43930975980337,7.41742697315387,7.04819866402561,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.21207784439725,2.63542779877213,2.46506297195585,3.50786222040047,1.07416017400489,0.596044064343795,1.44234539423963,1.9199638532695,1.41353029927407,0.838274873204998,1.41156659191577,1.55932609183604,1.34696578296461,1.75315353272353,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr3:58902298..58902304,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=601 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:58902298..58902304,- | |||
|description=CAGE_peak_at_chr3:58902298..58902304,- | |||
|id=chr3:58902298..58902304,- | |||
|ontology_enrichment_celltype=CL:0000988!1.26e-15!32;CL:0002032!1.26e-15!32;CL:0000037!1.26e-15!32;CL:0000566!1.26e-15!32;CL:0000837!1.26e-15!32;CL:0000838!1.63e-13!12;CL:0000084!1.79e-12!11;CL:0000827!1.79e-12!11;CL:0000542!4.09e-12!13;CL:0000051!4.09e-12!13;CL:0002031!2.51e-11!25;CL:0000791!2.76e-10!9;CL:0000789!2.76e-10!9;CL:0002420!2.76e-10!9;CL:0002419!2.76e-10!9;CL:0000790!2.76e-10!9;CL:0000624!2.51e-09!8;CL:0000738!3.22e-08!17;CL:0002087!3.22e-08!17;CL:0002320!3.43e-08!46;CL:0000134!3.43e-08!46;CL:0000893!1.28e-07!6;CL:0002489!1.28e-07!6;CL:0000898!1.28e-07!6;CL:0000809!1.28e-07!6;CL:0000810!1.28e-07!6;CL:0000895!1.28e-07!6;CL:0000808!1.28e-07!6;CL:0000894!1.28e-07!6;CL:0000806!1.28e-07!6;CL:0000807!1.28e-07!6;CL:0000805!1.28e-07!6;CL:0002425!1.28e-07!6;CL:0002436!1.28e-07!6;CL:0002427!1.28e-07!6;CL:0002428!1.28e-07!6;CL:0002429!1.28e-07!6;CL:0002433!1.28e-07!6;CL:0002431!1.28e-07!6;CL:0002432!1.28e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.63e-27,32;CL:0002032,5.63e-27,32;CL:0000037,5.63e-27,32;CL:0000837,5.63e-27,32;CL:0000838,4.01e-24,12;CL:0000084,3.75e-22,11;CL:0000827,3.75e-22,11;CL:0000542,5.04e-22,13;CL:0000051,5.04e-22,13;CL:0002031,1.50e-18,25;CL:0000791,5.13e-18,9;CL:0000789,5.13e-18,9;CL:0002420,5.13e-18,9;CL:0002419,5.13e-18,9;CL:0000790,5.13e-18,9;CL:0002320,6.40e-17,46;CL:0000134,6.40e-17,46;CL:0000624,3.29e-16,8;CL:0000738,4.20e-16,17;CL:0002087,4.20e-16,17;CL:0000219,1.55e-13,54;CL:0000893,5.43e-13,6;CL:0002489,5.43e-13,6;CL:0000898,5.43e-13,6;CL:0000809,5.43e-13,6;CL:0000810,5.43e-13,6;CL:0000895,5.43e-13,6;CL:0000808,5.43e-13,6;CL:0000894,5.43e-13,6;CL:0000806,5.43e-13,6;CL:0000807,5.43e-13,6;CL:0000805,5.43e-13,6;CL:0002425,5.43e-13,6;CL:0002436,5.43e-13,6;CL:0002427,5.43e-13,6;CL:0002428,5.43e-13,6;CL:0002429,5.43e-13,6;CL:0002433,5.43e-13,6;CL:0002431,5.43e-13,6;CL:0002432,5.43e-13,6;CL:0000049,8.44e-09,19;CL:0000034,2.02e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.21e-23!48;UBERON:0002390!1.83e-20!45;UBERON:0003061!1.83e-20!45;UBERON:0004177!8.57e-19!29;UBERON:0002405!4.39e-18!70;UBERON:0003408!2.55e-15!24;UBERON:0006562!4.39e-15!24;UBERON:0001557!4.39e-15!24;UBERON:0001042!4.39e-15!24;UBERON:0008814!4.39e-15!24;UBERON:0009145!4.39e-15!24;UBERON:0002370!1.26e-14!23;UBERON:0000974!1.26e-14!23;UBERON:0004807!1.26e-14!23;UBERON:0005058!1.26e-14!23;UBERON:0003351!1.26e-14!23;UBERON:0009113!1.26e-14!23;UBERON:0003295!1.26e-14!23;UBERON:0009722!1.26e-14!23;UBERON:0005562!1.26e-14!23;UBERON:0007690!1.26e-14!23;UBERON:0005057!1.28e-12!51;UBERON:0000072!1.49e-12!27;UBERON:0001004!3.09e-11!42;UBERON:0000065!1.21e-10!41;UBERON:0003081!5.68e-10!88;UBERON:0000063!7.79e-10!35;UBERON:0001041!2.16e-09!92;UBERON:0000077!3.14e-08!97;UBERON:0002384!3.43e-08!46;UBERON:0001007!2.39e-07!128;UBERON:0001555!2.39e-07!128;UBERON:0007026!2.39e-07!128;UBERON:0004119!5.18e-07!130;UBERON:0000925!5.18e-07!130;UBERON:0006595!5.18e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-33,48;UBERON:0002405,1.14e-33,48;UBERON:0002390,7.70e-29,45;UBERON:0003061,7.70e-29,45;UBERON:0004177,5.01e-26,29;UBERON:0005057,5.01e-26,29;UBERON:0003408,4.92e-24,24;UBERON:0002370,9.53e-23,23;UBERON:0000974,9.53e-23,23;UBERON:0004807,9.53e-23,23;UBERON:0005058,9.53e-23,23;UBERON:0003351,9.53e-23,23;UBERON:0009113,9.53e-23,23;UBERON:0003295,9.53e-23,23;UBERON:0009722,9.53e-23,23;UBERON:0005562,9.53e-23,23;UBERON:0007690,9.53e-23,23;UBERON:0006562,1.32e-21,24;UBERON:0001557,1.32e-21,24;UBERON:0001042,1.32e-21,24;UBERON:0008814,1.32e-21,24;UBERON:0009145,1.32e-21,24;UBERON:0000077,1.38e-20,35;UBERON:0000072,1.09e-18,27;UBERON:0002384,6.40e-17,46;UBERON:0007811,2.11e-14,36;UBERON:0001004,4.92e-13,42;UBERON:0000065,4.37e-12,41;UBERON:0003081,2.10e-11,87;UBERON:0000153,2.72e-11,43;UBERON:0001041,2.42e-08,80;UBERON:0003929,6.89e-08,55;UBERON:0002368,7.19e-07,60;UBERON:0002530,8.83e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,41.5326730347417,40.7272275800269,15.7520530767465,13.4814948702119,4.79362043807376,3.75907730401689,0.666219523631325,2.02475267389826,0.699561878128147,6.78243655520211,8.36398044995006,14.004858509335,0.0850432901510698,56.0993874285002,18.2839852397255,3.19984845586813,2.75291137280604,0,0,0,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5769998179838,2.90144856804538,6.04968838456435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,8.02707439306232,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,1.27728527604296,8.74650408893218,4.79922184794726,5.20987930999565,0.149790639404823,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,4.91549231119264,2.31613116403244,1.42081749697796,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,1.29327233116623,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,1.36696704638282,0.619160603889667,0.370389054739423,1.13021074202815,1.6403307326523,2.0590035588587,5.43930975980337,7.41742697315387,7.04819866402561,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.21207784439725,2.63542779877213,2.46506297195585,3.50786222040047,1.07416017400489,0.596044064343795,1.44234539423963,1.9199638532695,1.41353029927407,0.838274873204998,1.41156659191577,1.55932609183604,1.34696578296461,1.75315353272353,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr3:58902298..58902304,- | |||
}} |
Latest revision as of 21:50, 3 August 2015
Short description: | p@chr3:58902298..58902304, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:58902298..58902304, - |
Coexpression cluster: | MCL_coexpression_mm9:601 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.14e-33 | 48 |
immune system | 1.14e-33 | 48 |
hematopoietic system | 7.70e-29 | 45 |
blood island | 7.70e-29 | 45 |
hemopoietic organ | 5.01e-26 | 29 |
immune organ | 5.01e-26 | 29 |
gland of gut | 4.92e-24 | 24 |
thymus | 9.53e-23 | 23 |
neck | 9.53e-23 | 23 |
respiratory system epithelium | 9.53e-23 | 23 |
hemolymphoid system gland | 9.53e-23 | 23 |
pharyngeal epithelium | 9.53e-23 | 23 |
thymic region | 9.53e-23 | 23 |
pharyngeal gland | 9.53e-23 | 23 |
entire pharyngeal arch endoderm | 9.53e-23 | 23 |
thymus primordium | 9.53e-23 | 23 |
early pharyngeal endoderm | 9.53e-23 | 23 |
pharynx | 1.32e-21 | 24 |
upper respiratory tract | 1.32e-21 | 24 |
chordate pharynx | 1.32e-21 | 24 |
pharyngeal arch system | 1.32e-21 | 24 |
pharyngeal region of foregut | 1.32e-21 | 24 |
mixed endoderm/mesoderm-derived structure | 1.38e-20 | 35 |
segment of respiratory tract | 1.09e-18 | 27 |
connective tissue | 6.40e-17 | 46 |
craniocervical region | 2.11e-14 | 36 |
respiratory system | 4.92e-13 | 42 |
respiratory tract | 4.37e-12 | 41 |
lateral plate mesoderm | 2.10e-11 | 87 |
anterior region of body | 2.72e-11 | 43 |
foregut | 2.42e-08 | 80 |
gut epithelium | 6.89e-08 | 55 |
endocrine gland | 7.19e-07 | 60 |
gland | 8.83e-07 | 65 |