FFCP PHASE1:Hg19::chr5:152870287..152870303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4571 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z1W1 | |||
|association_with_transcript=57bp_to_ENST00000537037_5end | |||
|cluster_id=chr5:152870287..152870303,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_GRIA1_5end | |||
|id=chr5:152870287..152870303,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.30e-08,8;CL:0002605,2.33e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-14;82!UBERON:0006215;1.71e-09;3!UBERON:0006241;4.80e-08;3!UBERON:0003057;4.80e-08;3!UBERON:0010122;7.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.36e-64!57;UBERON:0005068!4.36e-64!57;UBERON:0006241!4.36e-64!57;UBERON:0007135!4.36e-64!57;UBERON:0005743!1.44e-59!86;UBERON:0001017!2.75e-59!82;UBERON:0000073!3.81e-57!94;UBERON:0001016!3.81e-57!94;UBERON:0002780!6.13e-54!41;UBERON:0001890!6.13e-54!41;UBERON:0006240!6.13e-54!41;UBERON:0002616!1.06e-53!59;UBERON:0003075!2.00e-52!86;UBERON:0007284!2.00e-52!86;UBERON:0003080!2.49e-52!42;UBERON:0000955!2.01e-51!69;UBERON:0006238!2.01e-51!69;UBERON:0002346!3.51e-49!90;UBERON:0001893!1.66e-48!34;UBERON:0002020!2.25e-48!34;UBERON:0003528!2.25e-48!34;UBERON:0002791!4.72e-47!33;UBERON:0001869!3.63e-46!32;UBERON:0003056!4.57e-43!61;UBERON:0007023!6.50e-40!115;UBERON:0000956!3.50e-36!25;UBERON:0000203!3.50e-36!25;UBERON:0004121!5.72e-36!169;UBERON:0000033!2.82e-35!123;UBERON:0000924!1.41e-34!173;UBERON:0006601!1.41e-34!173;UBERON:0000153!8.96e-34!129;UBERON:0007811!8.96e-34!129;UBERON:0002619!2.36e-32!22;UBERON:0001950!3.70e-29!20;UBERON:0000025!1.98e-14!194;UBERON:0000475!2.11e-14!365;UBERON:0002420!5.45e-14!9;UBERON:0007245!5.45e-14!9;UBERON:0010009!5.45e-14!9;UBERON:0010011!5.45e-14!9;UBERON:0000454!5.45e-14!9;UBERON:0002308!2.07e-13!9;UBERON:0000125!2.07e-13!9;UBERON:0003076!9.21e-13!15;UBERON:0003057!9.21e-13!15;UBERON:0009663!6.90e-11!7;UBERON:0001871!1.64e-10!7;UBERON:0000200!2.45e-10!6;UBERON:0000483!2.95e-10!309;UBERON:0000064!3.46e-10!219;UBERON:0000119!5.81e-10!312;UBERON:0004733!2.15e-09!12;UBERON:0002028!2.15e-09!12;UBERON:0007277!2.15e-09!12;UBERON:0000349!2.29e-09!5;UBERON:0000477!2.62e-09!286;UBERON:0004111!3.19e-09!241;UBERON:0001872!5.34e-09!5;UBERON:0002021!1.18e-08!5;UBERON:0002298!1.62e-08!8;UBERON:0004732!1.69e-08!13;UBERON:0000369!1.74e-07!4;UBERON:0002435!1.74e-07!4;UBERON:0000204!1.74e-07!4;UBERON:0010082!1.74e-07!4;UBERON:0000468!2.09e-07!659;UBERON:0000481!2.68e-07!347;UBERON:0001894!4.53e-07!7;UBERON:0006222!4.53e-07!7;UBERON:0000062!7.97e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.41e-73;32!UBERON:0001893;3.82e-71;34!UBERON:0003528;8.33e-71;34!UBERON:0002020;8.33e-71;34!UBERON:0002791;2.01e-69;32!UBERON:0000956;7.71e-64;25!UBERON:0000203;7.71e-64;25!UBERON:0002780;8.42e-60;41!UBERON:0001890;8.42e-60;41!UBERON:0002619;5.56e-57;22!UBERON:0000073;7.48e-53;53!UBERON:0002616;7.48e-53;53!UBERON:0001950;3.04e-51;20!UBERON:0000955;1.62e-38;68!UBERON:0001017;2.65e-38;75!UBERON:0001016;2.86e-30;83!UBERON:0002420;2.61e-19;9!UBERON:0007245;2.61e-19;9!UBERON:0010009;2.61e-19;9!UBERON:0010011;2.61e-19;9!UBERON:0000454;2.61e-19;9!UBERON:0000125;1.80e-18;9!UBERON:0002308;1.80e-18;9!UBERON:0000200;3.43e-17;6!UBERON:0000349;1.91e-15;5!UBERON:0001871;2.99e-15;6!UBERON:0001872;8.26e-15;5!UBERON:0002021;4.07e-14;5!UBERON:0009663;6.32e-14;7!UBERON:0007023;1.38e-13;114!UBERON:0004733;3.02e-13;12!UBERON:0002028;3.02e-13;12!UBERON:0004732;4.07e-12;13!UBERON:0000369;4.14e-12;4!UBERON:0002435;4.14e-12;4!UBERON:0000204;4.14e-12;4!UBERON:0002298;1.19e-10;6!UBERON:0011216;1.41e-10;132!UBERON:0005383;1.38e-09;3!UBERON:0005382;1.38e-09;3!UBERON:0001870;2.05e-09;3!UBERON:0001896;3.14e-08;3!UBERON:0005290;3.14e-08;3!UBERON:0002240;4.80e-08;3!UBERON:0005174;4.80e-08;3!UBERON:0001137;4.80e-08;3!UBERON:0010314;6.92e-08;132!UBERON:0002680;1.21e-07;9!UBERON:0001895;1.21e-07;9!UBERON:0001954;2.40e-07;2!UBERON:0003022;2.40e-07;2!UBERON:0002421;2.40e-07;2!UBERON:0002600;2.40e-07;2!UBERON:0001876;2.95e-07;2!UBERON:0002771;4.57e-07;2!UBERON:0001873;7.04e-07;2!UBERON:0002702;8.59e-07;2 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,2.86235987131057,3.28498620174922,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.579386075843295,0,0,2.17430079477356,0.221729397462564,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,1.49490172172997,0.847727604638247,0,0.309157587715317,0.515281080091258,0.18611685633159,0,0,0,2.30124746605748,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.414644220061482,0.252320850875628,0,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.462942225792648,0,0,0,6.14431146367907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.84928690295345,1.43248770591916,0,0,0,0,8.38512259934129,3.90419561572865,2.31986643833309,4.69045542936177,2.55175500661265,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,1.32845119707087,0.184369168541703,1.04260337361699,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.515205058238611,0,0,0,0,0,0.773365746336976,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860468113224309,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,16.9005100120271,22.7884454585031,0,0,0,1.9924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,4.84666373047609,4.08179631912146,11.9768278800717,0,0,0,0,0,0,0.689486746482929,0,0,5.31444831488303,12.6626260556678,10.6807215421958,9.28865783422287,6.2064999980245,4.16832254592548,0,0,0.0769502585037971,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,2.42644078730437,0,2.34264445725339,0,0,0,0,0,12.8550559884806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,2.93774963014692,0,0,8.23040347426423,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.9166753044879,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,30.2187282127535,28.4665118773193,0,0,0,0,0,11.2994175383926,0,0,0,0,0,0,0,0,3.051222451857,0,0,0.653174720218818,0,0,0,0,0,0,2.06852730178481,3.17358244182456,0,0,0.640724475406168,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0,4.43034089983493,9.64007492725509,11.517565624998,2.29363678276028,1.44207766997908,2.98062734118641,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19428766609585,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.899720157449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,6.23023483435657,4.25089728976755,7.82205909380041,3.69209455633359,29.2403167617193,2.90460460349715,10.6573926117022,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,5.47054435408997,7.81078098613847,13.2279549760758,6.78549169074803,15.8622694615284,0,0,0,0,1.60710550763486,1.00885116665647,0,0.227662191351298,0,0,0,0.951576261675644,6.11686794134496,0,0,0,11.9407848336161,0,0,0,0,0.714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0.329821550236287,0,0.231522474323834,0,0,0,0.235676547101626,2.55201007249429,1.18818560130834,1.2679671827502,0,0,0,0,0,0,0,0,0,0.573358332605805,0,7.54705541119153,23.12658658804,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,1.60778478093707,0.829169439458779,3.72358785102823,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p4@GRIA1 | |||
}} |
Latest revision as of 11:28, 16 September 2015
Short description: | p4@GRIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRIA1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 57bp_to_ENST00000537037_5end |
EntrezGene: | GRIA1 |
HGNC: | 4571 |
UniProt: | B7Z1W1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.30e-08 | 8 |
astrocyte of the cerebral cortex | 2.33e-08 | 3 |