FFCP PHASE1:Mm9::chr11:61466761..61466855,+: Difference between revisions
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{{FFCP|EntrezGene=71520|HGNC=|MCL_coexpression_id=266|UniProt=Q9CX99|association_with_transcript=0bp_to_ENSMUST00000004959,NM_027817,uc007jhz.1_5end|description=CAGE_peak_1_at_Grap_5end|id=chr11:61466761..61466855,+|ontology_enrichment_celltype=CL:0002031!4.99e-08!25;CL:0000738!1.55e-07!17;CL:0002087!1.55e-07!17;CL:0000791!1.94e-07!9;CL:0000789!1.94e-07!9;CL:0002420!1.94e-07!9;CL:0002419!1.94e-07!9;CL:0000790!1.94e-07!9;CL:0000838!2.62e-07!12;CL:0000624!8.05e-07!8|ontology_enrichment_celltype_v019_2=CL:0002031,6.04e-08,25;CL:0000738,1.49e-07,17;CL:0002087,1.49e-07,17;CL:0000791,1.87e-07,9;CL:0000789,1.87e-07,9;CL:0002420,1.87e-07,9;CL:0002419,1.87e-07,9;CL:0000790,1.87e-07,9;CL:0000838,2.53e-07,12;CL:0000624,7.79e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.83e-16!48;UBERON:0002405!2.64e-15!70;UBERON:0002390!5.39e-15!45;UBERON:0003061!5.39e-15!45;UBERON:0000926!2.89e-14!193;UBERON:0004120!2.89e-14!193;UBERON:0006603!2.89e-14!193;UBERON:0003081!2.51e-12!88;UBERON:0001004!5.64e-12!42;UBERON:0004177!1.05e-11!29;UBERON:0000065!1.12e-11!41;UBERON:0001041!3.38e-11!92;UBERON:0000077!2.10e-10!97;UBERON:0005057!3.35e-10!51;UBERON:0003104!3.71e-10!131;UBERON:0009142!3.71e-10!131;UBERON:0003408!4.46e-09!24;UBERON:0002370!8.40e-09!23;UBERON:0000974!8.40e-09!23;UBERON:0004807!8.40e-09!23;UBERON:0005058!8.40e-09!23;UBERON:0003351!8.40e-09!23;UBERON:0009113!8.40e-09!23;UBERON:0003295!8.40e-09!23;UBERON:0009722!8.40e-09!23;UBERON:0005562!8.40e-09!23;UBERON:0007690!8.40e-09!23;UBERON:0006562!1.23e-08!24;UBERON:0001557!1.23e-08!24;UBERON:0001042!1.23e-08!24;UBERON:0008814!1.23e-08!24;UBERON:0009145!1.23e-08!24;UBERON:0001048!3.84e-08!147;UBERON:0002530!1.12e-07!65;UBERON:0009569!1.31e-07!66;UBERON:0002368!2.46e-07!60;UBERON:0002048!2.67e-07!14;UBERON:0000117!2.67e-07!14;UBERON:0000171!2.67e-07!14;UBERON:0000170!2.67e-07!14;UBERON:0005597!2.67e-07!14;UBERON:0000118!2.67e-07!14;UBERON:0005177!3.10e-07!85;UBERON:0000949!3.27e-07!72;UBERON:0000479!6.35e-07!349;UBERON:0005153!7.27e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.21e-16,48;UBERON:0002405,1.21e-16,48;UBERON:0002390,3.63e-15,45;UBERON:0003061,3.63e-15,45;UBERON:0001004,4.28e-12,42;UBERON:0003081,4.94e-12,87;UBERON:0004177,7.06e-12,29;UBERON:0005057,7.06e-12,29;UBERON:0000065,8.50e-12,41;UBERON:0001041,2.57e-11,80;UBERON:0000077,2.73e-10,35;UBERON:0003408,3.11e-09,24;UBERON:0002370,5.87e-09,23;UBERON:0000974,5.87e-09,23;UBERON:0004807,5.87e-09,23;UBERON:0005058,5.87e-09,23;UBERON:0003351,5.87e-09,23;UBERON:0009113,5.87e-09,23;UBERON:0003295,5.87e-09,23;UBERON:0009722,5.87e-09,23;UBERON:0005562,5.87e-09,23;UBERON:0007690,5.87e-09,23;UBERON:0006562,8.70e-09,24;UBERON:0001557,8.70e-09,24;UBERON:0001042,8.70e-09,24;UBERON:0008814,8.70e-09,24;UBERON:0009145,8.70e-09,24;UBERON:0000926,2.57e-08,120;UBERON:0004120,2.57e-08,120;UBERON:0006603,2.57e-08,120;UBERON:0002530,1.14e-07,65;UBERON:0009569,1.83e-07,66;UBERON:0001048,2.03e-07,134;UBERON:0005177,2.34e-07,79;UBERON:0002368,2.52e-07,60;UBERON:0002048,2.58e-07,14;UBERON:0000117,2.58e-07,14;UBERON:0000171,2.58e-07,14;UBERON:0000170,2.58e-07,14;UBERON:0005597,2.58e-07,14;UBERON:0000118,2.58e-07,14;UBERON:0000479,3.32e-07,349;UBERON:0000949,3.33e-07,72;UBERON:0005911,5.76e-07,69;UBERON:0005153,7.04e-07,17|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,205.435207595548,483.18689442452,595.928284015795,254.943554687777,291.726785445945,148.602233580287,169.420739888017,30.3129883252253,39.6851524084059,8.39474253753776,233.284271282417,220.891352538845,209.648487988227,14.3723160355308,7.84398514486994,3.39559725880616,15.359272588167,14.9116032693661,0.57423196411502,0,0.215471232685889,1.14014051673824,3.78045194639896,2.66076612786366,0.635030673459631,0.61506478758457,0,0,0,0,6.27797446105362,4.6880120671428,2.61761871986899,2.35292595212406,0.683045484958446,0.485510353031154,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,162.916910482062,130.565185562042,129.732206468991,3.08711323243136,3.43840127926508,3.6097046459421,2.22548106945558,0,2.53532561402472,0,0,13.9484456178617,8.89979726310277,14.9200824138681,12.2836045312546,5.76327457982332,2.28117147078651,2.56511282830212,2.94454945891935,5.42736870367227,3.75476519617743,1.95985278743926,2.77951865952885,0.919218786610021,4.40463523997555,4.72443150915195,3.68655679814984,2.76961204233407,3.65950574409639,1.56274011167028,2.51264699101243,3.93933827022176,6.57032465440283,2.94628585473668,5.26775218956681,4.10078780815661,2.72614295999463,1.96486056277642,35.073603132903,27.5335640634044,0.679971333707751,0.539703191637817,2.59910566979068,1.79210754838934,12.4995533917259,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,11.6467557313441,115.745233990286,9.20341262201914,4.3371331691534,5.48037860961854,6.22661842591358,6.63179618431539,5.87943535678524,9.42499434972566,2.47194967734374,12.5801440520323,15.0383793831479,7.117741397686,14.79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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71520 | |||
|HGNC= | |||
|MCL_coexpression_id=266 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CX99 | |||
|association_with_transcript=0bp_to_ENSMUST00000004959,NM_027817,uc007jhz.1_5end | |||
|cluster_id=chr11:61466761..61466855,+ | |||
|description=CAGE_peak_1_at_Grap_5end | |||
|id=chr11:61466761..61466855,+ | |||
|ontology_enrichment_celltype=CL:0002031!4.99e-08!25;CL:0000738!1.55e-07!17;CL:0002087!1.55e-07!17;CL:0000791!1.94e-07!9;CL:0000789!1.94e-07!9;CL:0002420!1.94e-07!9;CL:0002419!1.94e-07!9;CL:0000790!1.94e-07!9;CL:0000838!2.62e-07!12;CL:0000624!8.05e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.04e-08,25;CL:0000738,1.49e-07,17;CL:0002087,1.49e-07,17;CL:0000791,1.87e-07,9;CL:0000789,1.87e-07,9;CL:0002420,1.87e-07,9;CL:0002419,1.87e-07,9;CL:0000790,1.87e-07,9;CL:0000838,2.53e-07,12;CL:0000624,7.79e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.83e-16!48;UBERON:0002405!2.64e-15!70;UBERON:0002390!5.39e-15!45;UBERON:0003061!5.39e-15!45;UBERON:0000926!2.89e-14!193;UBERON:0004120!2.89e-14!193;UBERON:0006603!2.89e-14!193;UBERON:0003081!2.51e-12!88;UBERON:0001004!5.64e-12!42;UBERON:0004177!1.05e-11!29;UBERON:0000065!1.12e-11!41;UBERON:0001041!3.38e-11!92;UBERON:0000077!2.10e-10!97;UBERON:0005057!3.35e-10!51;UBERON:0003104!3.71e-10!131;UBERON:0009142!3.71e-10!131;UBERON:0003408!4.46e-09!24;UBERON:0002370!8.40e-09!23;UBERON:0000974!8.40e-09!23;UBERON:0004807!8.40e-09!23;UBERON:0005058!8.40e-09!23;UBERON:0003351!8.40e-09!23;UBERON:0009113!8.40e-09!23;UBERON:0003295!8.40e-09!23;UBERON:0009722!8.40e-09!23;UBERON:0005562!8.40e-09!23;UBERON:0007690!8.40e-09!23;UBERON:0006562!1.23e-08!24;UBERON:0001557!1.23e-08!24;UBERON:0001042!1.23e-08!24;UBERON:0008814!1.23e-08!24;UBERON:0009145!1.23e-08!24;UBERON:0001048!3.84e-08!147;UBERON:0002530!1.12e-07!65;UBERON:0009569!1.31e-07!66;UBERON:0002368!2.46e-07!60;UBERON:0002048!2.67e-07!14;UBERON:0000117!2.67e-07!14;UBERON:0000171!2.67e-07!14;UBERON:0000170!2.67e-07!14;UBERON:0005597!2.67e-07!14;UBERON:0000118!2.67e-07!14;UBERON:0005177!3.10e-07!85;UBERON:0000949!3.27e-07!72;UBERON:0000479!6.35e-07!349;UBERON:0005153!7.27e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.21e-16,48;UBERON:0002405,1.21e-16,48;UBERON:0002390,3.63e-15,45;UBERON:0003061,3.63e-15,45;UBERON:0001004,4.28e-12,42;UBERON:0003081,4.94e-12,87;UBERON:0004177,7.06e-12,29;UBERON:0005057,7.06e-12,29;UBERON:0000065,8.50e-12,41;UBERON:0001041,2.57e-11,80;UBERON:0000077,2.73e-10,35;UBERON:0003408,3.11e-09,24;UBERON:0002370,5.87e-09,23;UBERON:0000974,5.87e-09,23;UBERON:0004807,5.87e-09,23;UBERON:0005058,5.87e-09,23;UBERON:0003351,5.87e-09,23;UBERON:0009113,5.87e-09,23;UBERON:0003295,5.87e-09,23;UBERON:0009722,5.87e-09,23;UBERON:0005562,5.87e-09,23;UBERON:0007690,5.87e-09,23;UBERON:0006562,8.70e-09,24;UBERON:0001557,8.70e-09,24;UBERON:0001042,8.70e-09,24;UBERON:0008814,8.70e-09,24;UBERON:0009145,8.70e-09,24;UBERON:0000926,2.57e-08,120;UBERON:0004120,2.57e-08,120;UBERON:0006603,2.57e-08,120;UBERON:0002530,1.14e-07,65;UBERON:0009569,1.83e-07,66;UBERON:0001048,2.03e-07,134;UBERON:0005177,2.34e-07,79;UBERON:0002368,2.52e-07,60;UBERON:0002048,2.58e-07,14;UBERON:0000117,2.58e-07,14;UBERON:0000171,2.58e-07,14;UBERON:0000170,2.58e-07,14;UBERON:0005597,2.58e-07,14;UBERON:0000118,2.58e-07,14;UBERON:0000479,3.32e-07,349;UBERON:0000949,3.33e-07,72;UBERON:0005911,5.76e-07,69;UBERON:0005153,7.04e-07,17 | |||
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| |||
|short_description=p1@Grap | |||
}} |
Latest revision as of 20:42, 1 October 2015
Short description: | p1@Grap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grap_5end |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | 0bp_to_ENSMUST00000004959, NM_027817, uc007jhz.1_5end |
EntrezGene: | Grap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.04e-08 | 25 |
leukocyte | 1.49e-07 | 17 |
nongranular leukocyte | 1.49e-07 | 17 |
mature alpha-beta T cell | 1.87e-07 | 9 |
alpha-beta T cell | 1.87e-07 | 9 |
immature T cell | 1.87e-07 | 9 |
mature T cell | 1.87e-07 | 9 |
immature alpha-beta T cell | 1.87e-07 | 9 |
lymphoid lineage restricted progenitor cell | 2.53e-07 | 12 |
CD4-positive, alpha-beta T cell | 7.79e-07 | 8 |