FFCP PHASE1:Hg19::chr2:88425813..88425828,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-424bp_to_BX641099_5end | |||
|cluster_id=chr2:88425813..88425828,- | |||
|coexpression_cluster_id=C1489 | |||
|description=CAGE_peak_2_at_BX641099_5end | |||
|id=chr2:88425813..88425828,- | |||
|ontology_enrichment_celltype=CL:0000181!4.80e-21!12;CL:0000417!4.80e-21!12;CL:0000668!4.80e-21!12;CL:0000414!4.80e-21!12;CL:0000412!4.80e-21!12;CL:0000182!4.80e-21!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.24e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.11e-37,12;CL:0000223,1.92e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.71e-28;11!UBERON:0009497;1.10e-23;13!UBERON:0001041;2.90e-10;30!UBERON:0003104;6.34e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!5.70e-29!23;UBERON:0002107!8.36e-29!19;UBERON:0006925!8.36e-29!19;UBERON:0008836!8.36e-29!19;UBERON:0009856!1.95e-25!26;UBERON:0005057!2.47e-25!26;UBERON:0008835!1.09e-24!22;UBERON:0003894!1.09e-24!22;UBERON:0007499!1.48e-21!25;UBERON:0009497!1.48e-21!25;UBERON:0000015!1.48e-21!25;UBERON:0002423!1.48e-21!25;UBERON:0006235!1.48e-21!25;UBERON:0004161!1.48e-21!25;UBERON:0000160!8.72e-19!27;UBERON:0004921!1.32e-17!129;UBERON:0004185!1.32e-17!129;UBERON:0005409!1.45e-17!35;UBERON:0002365!4.12e-17!31;UBERON:0002330!4.12e-17!31;UBERON:0000059!6.65e-16!11;UBERON:0002368!5.41e-15!35;UBERON:0001007!5.04e-14!155;UBERON:0001555!5.04e-14!155;UBERON:0007026!5.04e-14!155;UBERON:0003929!1.01e-13!54;UBERON:0005172!1.97e-13!55;UBERON:0005173!1.97e-13!55;UBERON:0001155!9.75e-13!9;UBERON:0004119!1.51e-12!169;UBERON:0000925!1.51e-12!169;UBERON:0006595!1.51e-12!169;UBERON:0002417!6.43e-12!61;UBERON:0000916!6.43e-12!61;UBERON:0000949!2.42e-11!45;UBERON:0002530!3.12e-10!59;UBERON:0005911!2.25e-08!82;UBERON:0001154!3.83e-08!1;UBERON:0001153!3.83e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.28e-41;19!UBERON:0006925;4.28e-41;19!UBERON:0002423;4.39e-31;25!UBERON:0002365;5.31e-24;31!UBERON:0002330;5.31e-24;31!UBERON:0002368;3.23e-21;33!UBERON:0000160;2.77e-17;17!UBERON:0000949;1.63e-15;43!UBERON:0005409;1.58e-13;22!UBERON:0001007;2.25e-11;81!UBERON:0000059;6.86e-11;11!UBERON:0002108;7.70e-11;4!UBERON:0005172;2.50e-09;52!UBERON:0005173;2.50e-09;52!UBERON:0004921;2.52e-09;33!UBERON:0002417;2.94e-08;58!UBERON:0000916;2.94e-08;58!UBERON:0002530;3.92e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.64e-41,19;UBERON:0006925,4.64e-41,19;UBERON:0008836,4.64e-41,19;UBERON:0008835,2.23e-35,22;UBERON:0003894,2.23e-35,22;UBERON:0009854,8.19e-34,23;UBERON:0007499,4.67e-31,25;UBERON:0009497,4.67e-31,25;UBERON:0000015,4.67e-31,25;UBERON:0002423,4.67e-31,25;UBERON:0006235,4.67e-31,25;UBERON:0004161,4.67e-31,25;UBERON:0009856,7.73e-30,26;UBERON:0002365,6.44e-25,31;UBERON:0002330,6.44e-25,31;UBERON:0002368,5.45e-22,35;UBERON:0000160,2.50e-17,17;UBERON:0000949,6.10e-17,45;UBERON:0004921,3.97e-16,118;UBERON:0003929,5.46e-14,54;UBERON:0005172,5.46e-14,54;UBERON:0005173,5.46e-14,54;UBERON:0001007,7.61e-13,145;UBERON:0001555,7.61e-13,145;UBERON:0007026,7.61e-13,145;UBERON:0002530,9.77e-13,59;UBERON:0002417,1.64e-12,60;UBERON:0000916,1.64e-12,60;UBERON:0005409,5.42e-12,25;UBERON:0004119,1.71e-11,160;UBERON:0000925,1.71e-11,160;UBERON:0006595,1.71e-11,160;UBERON:0000059,6.53e-11,11;UBERON:0002108,7.14e-11,4;UBERON:0011216,4.85e-09,223;UBERON:0005911,6.23e-09,82;UBERON:0001041,2.27e-08,87;UBERON:0005177,4.33e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,5.89696330006576,14.1789577603537,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,0.530745387020035,18.9419344929424,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20592910460226,2.71972332657849,1.68508859635462,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,1.85217979459067,3.49695296806332,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@BX641099 | |||
}} |
Latest revision as of 13:00, 29 July 2015
Short description: | p2@BX641099 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BX641099_5end |
Coexpression cluster: | C1489_colon_Hepatocyte_liver_small_adenocarcinoma_hepatocellular_duodenum |
Association with transcript: | -424bp_to_BX641099_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.11e-37 | 12 |
endodermal cell | 1.92e-07 | 58 |