FFCP PHASE1:Hg19::chr2:176982078..176982095,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:176982078..176982095,+ | |||
|description=CAGE_peak_at_chr2:176982078..176982095,+ | |||
|id=chr2:176982078..176982095,+ | |||
|ontology_enrichment_celltype=CL:1000449!9.41e-24!16;CL:1000507!2.64e-23!12;CL:1000494!2.64e-23!12;CL:1000497!1.03e-20!18;CL:0002518!1.03e-20!18;CL:0002681!2.35e-17!13;CL:0002584!2.35e-17!13;CL:0005020!2.08e-15!6;CL:0002138!2.08e-15!6;CL:0005022!2.08e-15!6;CL:0002078!6.50e-11!44;CL:0000239!7.66e-09!3;CL:1000615!7.66e-09!3;CL:0002306!7.66e-09!3;CL:0002139!9.71e-09!24;CL:0000630!9.80e-09!9;CL:0002144!1.20e-08!3;CL:1000612!2.97e-08!7;CL:1000746!2.97e-08!7;CL:0000115!8.21e-08!35;CL:0000650!2.36e-07!3;CL:1000618!2.36e-07!3;CL:1001318!2.36e-07!3;CL:0002173!2.36e-07!3;CL:1000500!2.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.69e-37;10!CL:1000494;3.69e-37;10!CL:1000449;5.20e-36;15!CL:1000497;1.66e-31;17!CL:0002518;1.66e-31;17!CL:0002138;2.77e-28;6!CL:0002681;4.44e-24;12!CL:0002584;4.44e-24;12!CL:0002078;1.72e-18;45!CL:0002139;6.12e-18;24!CL:0000239;1.19e-15;3!CL:1000615;1.19e-15;3!CL:0002306;1.19e-15;3!CL:0002144;3.25e-15;3!CL:0000115;3.25e-13;36!CL:0000213;1.38e-08;58!CL:0000215;1.38e-08;58!CL:0000062;2.99e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.42e-37,10;CL:1000494,5.42e-37,10;CL:1000449,6.21e-36,15;CL:1000497,1.93e-31,17;CL:0002518,1.93e-31,17;CL:0005020,2.20e-28,6;CL:0002138,2.20e-28,6;CL:0005022,2.20e-28,6;CL:0002681,5.28e-24,12;CL:0002584,5.28e-24,12;CL:0002078,1.90e-23,45;CL:0002139,5.29e-18,24;CL:0000115,1.90e-16,36;CL:0000239,1.19e-15,3;CL:1000615,1.19e-15,3;CL:0002306,1.19e-15,3;CL:0002144,2.83e-15,3;CL:0000213,6.88e-13,58;CL:0000215,6.88e-13,58;CL:0000222,1.65e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.77e-28;6!CL:0000335;9.24e-07;11 | |||
|ontology_enrichment_disease=DOID:0060084!3.16e-08!3;DOID:127!3.16e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.26e-07;3!DOID:127;2.26e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.22e-07,3;DOID:127,2.22e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004876!1.30e-24!20;UBERON:0000080!6.15e-24!18;UBERON:0002120!6.15e-24!18;UBERON:0004875!6.15e-24!18;UBERON:0005721!6.15e-24!18;UBERON:0005754!6.15e-24!18;UBERON:0007297!6.15e-24!18;UBERON:0004211!9.41e-24!16;UBERON:0001285!9.41e-24!16;UBERON:0007684!9.41e-24!16;UBERON:0003220!9.41e-24!16;UBERON:0004208!9.41e-24!16;UBERON:0009773!2.64e-23!12;UBERON:0001231!2.64e-23!12;UBERON:0004810!2.64e-23!12;UBERON:0006555!3.84e-22!17;UBERON:0005103!3.84e-22!17;UBERON:0000083!3.84e-22!17;UBERON:0009201!3.84e-22!17;UBERON:0004819!3.84e-22!17;UBERON:0006553!3.84e-22!17;UBERON:0003074!3.84e-22!17;UBERON:0003060!3.84e-22!17;UBERON:0002113!1.07e-21!27;UBERON:0003918!1.07e-21!27;UBERON:0005095!1.07e-21!27;UBERON:0007687!1.07e-21!27;UBERON:0003887!5.92e-20!21;UBERON:0000489!1.04e-19!32;UBERON:0000058!6.09e-18!26;UBERON:0001225!2.35e-17!13;UBERON:0008987!2.35e-17!13;UBERON:0002465!2.23e-15!10;UBERON:0001473!3.27e-15!8;UBERON:0004536!3.27e-15!8;UBERON:0006558!3.27e-15!8;UBERON:0003064!8.93e-15!37;UBERON:0001008!3.58e-14!45;UBERON:0001851!1.20e-13!16;UBERON:0006554!5.72e-13!44;UBERON:0000353!1.05e-12!17;UBERON:0003886!2.69e-12!63;UBERON:0002553!1.74e-10!70;UBERON:0006853!7.66e-09!3;UBERON:0007685!7.66e-09!3;UBERON:0004134!7.66e-09!3;UBERON:0001915!1.20e-08!3;UBERON:0001982!1.20e-08!3;UBERON:0003103!1.88e-08!69;UBERON:0005172!2.48e-08!55;UBERON:0005173!2.48e-08!55;UBERON:0000074!2.97e-08!7;UBERON:0001229!2.97e-08!7;UBERON:0001230!2.97e-08!7;UBERON:0005749!2.97e-08!7;UBERON:0004199!2.97e-08!7;UBERON:0004209!2.97e-08!7;UBERON:0004198!2.97e-08!7;UBERON:0000464!3.59e-08!104;UBERON:0003567!2.36e-07!3;UBERON:0003838!2.36e-07!3;UBERON:0005169!2.36e-07!3;UBERON:0002321!2.36e-07!3;UBERON:0005215!2.36e-07!3;UBERON:0002303!2.36e-07!3;UBERON:0002319!2.36e-07!3;UBERON:0003586!3.83e-07!5;UBERON:0002417!4.15e-07!61;UBERON:0000916!4.15e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.69e-37;10!UBERON:0009773;3.69e-37;10!UBERON:0001231;3.69e-37;10!UBERON:0004810;3.69e-37;10!UBERON:0006555;5.20e-36;15!UBERON:0004819;5.20e-36;15!UBERON:0001285;5.20e-36;15!UBERON:0007684;5.20e-36;15!UBERON:0002465;8.04e-29;10!UBERON:0001473;3.72e-28;8!UBERON:0004536;3.72e-28;8!UBERON:0006558;3.72e-28;8!UBERON:0002113;1.04e-25;24!UBERON:0011143;1.04e-25;24!UBERON:0001225;4.44e-24;12!UBERON:0008987;4.44e-24;12!UBERON:0000489;7.84e-21;29!UBERON:0006554;4.73e-20;30!UBERON:0001008;4.73e-20;30!UBERON:0001851;5.26e-19;15!UBERON:0000353;5.26e-19;15!UBERON:0006853;1.19e-15;3!UBERON:0007685;1.19e-15;3!UBERON:0004134;1.19e-15;3!UBERON:0010523;3.25e-15;3!UBERON:0001915;3.25e-15;3!UBERON:0001982;3.25e-15;3!UBERON:0002405;7.22e-10;27!UBERON:0005172;2.16e-07;52!UBERON:0005173;2.16e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.42e-37,10;UBERON:0004211,6.21e-36,15;UBERON:0009773,6.21e-36,15;UBERON:0001231,6.21e-36,15;UBERON:0001285,6.21e-36,15;UBERON:0007684,6.21e-36,15;UBERON:0004208,6.21e-36,15;UBERON:0006555,1.51e-33,16;UBERON:0004819,1.51e-33,16;UBERON:0002465,4.48e-29,10;UBERON:0001473,2.03e-28,8;UBERON:0004536,2.03e-28,8;UBERON:0006558,2.03e-28,8;UBERON:0001225,5.28e-24,12;UBERON:0008987,5.28e-24,12;UBERON:0002113,2.10e-23,26;UBERON:0003918,2.10e-23,26;UBERON:0011143,2.10e-23,26;UBERON:0005095,2.10e-23,26;UBERON:0007687,2.10e-23,26;UBERON:0000489,3.23e-19,31;UBERON:0001851,6.03e-19,15;UBERON:0000353,6.03e-19,15;UBERON:0006853,1.19e-15,3;UBERON:0007685,1.19e-15,3;UBERON:0004134,1.19e-15,3;UBERON:0010523,2.83e-15,3;UBERON:0001915,2.83e-15,3;UBERON:0001982,2.83e-15,3;UBERON:0006554,8.12e-12,47;UBERON:0001008,1.61e-11,48;UBERON:0005172,5.76e-10,54;UBERON:0005173,5.76e-10,54;UBERON:0002417,9.97e-09,60;UBERON:0000916,9.97e-09,60;UBERON:0003103,2.01e-07,68;UBERON:0004876,7.61e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55050055501597,3.20189636418039,2.34304428935269,6.44526907374635,16.7259863258073,2.68468263302986,1.47065232138347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,1.79389635688862,1.49490172172997,0.211931901159562,0,0,0,0,0,0,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9718500298416,12.0376233269919,11.7957574385451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,1.20378439891088,0,1.03473071292505,1.32845119707087,10.5090426068771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60959690325929,2.0794141018192,2.35304930753057,7.30696123266303,2.21658420675039,0,0.340187410553031,3.23873874153209,1.54227252690289,1.08378575017541,0.501689773854853,16.0572052018374,18.2836721964319,7.61174166055406,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,8.03419649220798,0.096670718292122,0,0,0.413509717453592,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,1.04909176269996,0,0,0,0,0,0,4.88699641578341,0.864221491201268,5.22539776175055,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,4.69570555630561,0,1.52322084867518,0,0,0.214821114084977,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,1.10086159299127,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.358611026963382,0.332660356546013,0,0.213454691755431,0,0,0,1.4668973301944,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr2:176982078..176982095,+ | |||
}} |
Latest revision as of 02:46, 29 July 2015
Short description: | p@chr2:176982078..176982095, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:176982078..176982095, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.42e-37 | 10 |
nephron tubule epithelial cell | 5.42e-37 | 10 |
epithelial cell of nephron | 6.21e-36 | 15 |
kidney cell | 1.93e-31 | 17 |
kidney epithelial cell | 1.93e-31 | 17 |
lymphangioblast | 2.20e-28 | 6 |
endothelial cell of lymphatic vessel | 2.20e-28 | 6 |
vascular lymphangioblast | 2.20e-28 | 6 |
kidney cortical cell | 5.28e-24 | 12 |
renal cortical epithelial cell | 5.28e-24 | 12 |
meso-epithelial cell | 1.90e-23 | 45 |
endothelial cell of vascular tree | 5.29e-18 | 24 |
endothelial cell | 1.90e-16 | 36 |
brush border epithelial cell | 1.19e-15 | 3 |
kidney cortex tubule cell | 1.19e-15 | 3 |
epithelial cell of proximal tubule | 1.19e-15 | 3 |
capillary endothelial cell | 2.83e-15 | 3 |
lining cell | 6.88e-13 | 58 |
barrier cell | 6.88e-13 | 58 |
mesodermal cell | 1.65e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.22e-07 | 3 |
leiomyoma | 2.22e-07 | 3 |