FFCP PHASE1:Hg19::chr22:21355865..21355886,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23190 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_ENST00000488975_5end | |||
|cluster_id=chr22:21355865..21355886,- | |||
|description=CAGE_peak_5_at_THAP7_5end | |||
|id=chr22:21355865..21355886,- | |||
|ontology_enrichment_celltype=CL:0000066!4.15e-09!254;CL:1000449!2.93e-07!16;CL:1000507!8.76e-07!12;CL:1000494!8.76e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.40e-21;10!CL:1000494;3.40e-21;10!CL:1000449;2.15e-20;15!CL:1000497;1.09e-17;17!CL:0002518;1.09e-17;17!CL:0002681;4.00e-17;12!CL:0002584;4.00e-17;12!CL:0002202;6.62e-11;9!CL:0002632;6.62e-11;9!CL:0002328;1.85e-09;3!CL:0000239;5.32e-09;3!CL:1000615;5.32e-09;3!CL:0002306;5.32e-09;3!CL:0000123;2.59e-07;2!CL:0000242;2.59e-07;2!CL:0002368;2.63e-07;13!CL:0000244;8.27e-07;4!CL:0000731;8.27e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.00e-21,10;CL:1000494,5.00e-21,10;CL:1000449,2.25e-20,15;CL:1000497,1.13e-17,17;CL:0002518,1.13e-17,17;CL:0002681,4.32e-17,12;CL:0002584,4.32e-17,12;CL:0002202,3.50e-11,9;CL:0002632,3.50e-11,9;CL:0002328,1.29e-09,3;CL:0000239,4.29e-09,3;CL:1000615,4.29e-09,3;CL:0002306,4.29e-09,3;CL:0000066,2.10e-08,253;CL:0002368,1.73e-07,13;CL:0000242,2.47e-07,2;CL:0000244,7.97e-07,4;CL:0000731,7.97e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!5.15e-10!44;UBERON:0001008!1.99e-09!45;UBERON:0002113!3.75e-08!27;UBERON:0003918!3.75e-08!27;UBERON:0005095!3.75e-08!27;UBERON:0007687!3.75e-08!27;UBERON:0000080!1.79e-07!18;UBERON:0002120!1.79e-07!18;UBERON:0004875!1.79e-07!18;UBERON:0005721!1.79e-07!18;UBERON:0005754!1.79e-07!18;UBERON:0007297!1.79e-07!18;UBERON:0004211!2.93e-07!16;UBERON:0001285!2.93e-07!16;UBERON:0007684!2.93e-07!16;UBERON:0003220!2.93e-07!16;UBERON:0004208!2.93e-07!16;UBERON:0006555!5.22e-07!17;UBERON:0005103!5.22e-07!17;UBERON:0000083!5.22e-07!17;UBERON:0009201!5.22e-07!17;UBERON:0004819!5.22e-07!17;UBERON:0006553!5.22e-07!17;UBERON:0003074!5.22e-07!17;UBERON:0003060!5.22e-07!17;UBERON:0003064!5.51e-07!37;UBERON:0004876!6.51e-07!20;UBERON:0009773!8.76e-07!12;UBERON:0001231!8.76e-07!12;UBERON:0004810!8.76e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.40e-21;10!UBERON:0009773;3.40e-21;10!UBERON:0001231;3.40e-21;10!UBERON:0004810;3.40e-21;10!UBERON:0006555;2.15e-20;15!UBERON:0004819;2.15e-20;15!UBERON:0001285;2.15e-20;15!UBERON:0007684;2.15e-20;15!UBERON:0006554;1.15e-19;30!UBERON:0001008;1.15e-19;30!UBERON:0001225;4.00e-17;12!UBERON:0008987;4.00e-17;12!UBERON:0002113;1.52e-16;24!UBERON:0011143;1.52e-16;24!UBERON:0000353;2.06e-16;15!UBERON:0001851;2.49e-13;15!UBERON:0000489;3.83e-13;29!UBERON:0004815;1.85e-09;3!UBERON:0002031;1.85e-09;3!UBERON:0006853;5.32e-09;3!UBERON:0007685;5.32e-09;3!UBERON:0004134;5.32e-09;3!UBERON:0001737;4.19e-07;9!UBERON:0001557;4.19e-07;9!UBERON:0000072;5.63e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.00e-21,10;UBERON:0004211,2.25e-20,15;UBERON:0009773,2.25e-20,15;UBERON:0001231,2.25e-20,15;UBERON:0001285,2.25e-20,15;UBERON:0007684,2.25e-20,15;UBERON:0004208,2.25e-20,15;UBERON:0006555,6.14e-19,16;UBERON:0004819,6.14e-19,16;UBERON:0001225,4.32e-17,12;UBERON:0008987,4.32e-17,12;UBERON:0000353,2.01e-16,15;UBERON:0002113,6.04e-15,26;UBERON:0003918,6.04e-15,26;UBERON:0011143,6.04e-15,26;UBERON:0005095,6.04e-15,26;UBERON:0007687,6.04e-15,26;UBERON:0001851,2.64e-13,15;UBERON:0000489,4.97e-12,31;UBERON:0006554,4.97e-11,47;UBERON:0001008,1.02e-10,48;UBERON:0005177,1.69e-10,101;UBERON:0004815,1.29e-09,3;UBERON:0002031,1.29e-09,3;UBERON:0006853,4.29e-09,3;UBERON:0007685,4.29e-09,3;UBERON:0004134,4.29e-09,3;UBERON:0009569,5.99e-09,112;UBERON:0008947,8.74e-08,38;UBERON:0003258,8.74e-08,38;UBERON:0005172,9.15e-08,54;UBERON:0005173,9.15e-08,54;UBERON:0001737,5.54e-07,9;UBERON:0000072,7.26e-07,47 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0,1.22866968250754,3.48900583986214,0,0.263766978228454,0,0,0,0,0,0,0.492484232307152,1.02000345622126,0.313454721478088,0,0.547497700291537,0.502170558379211,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,7.35536979583142,2.71085326900425,1.47901604066715,0.154934401160603,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,1.43921049299656,0,0.32592226663359,0,0,0,0,0.443067789167242,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,1.14966148080576,0.68725489096526,0.506039384039006,0,0,0,0,0,0,0.473554504088034,0,1.41124720257313,2.94184215361858,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.327447688744282,3.27865759463288,1.11235332835329,0,0.522389211897802,0.26591592103773,0,0,0,0,0,0.694281003215189,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0.450445921933289,0,0,0.549605231791222,0,0,2.61656431285521,0,0.379891534993739,0.132409180813219,0,0.709336764396714,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0,0,0.103325781175765,0,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0,0,0,0.150238058906597,0.340296549480063,0,0,0.423863802319124,0,0.206105058476878,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0,0.946454400318751,1.18009283054671,1.20505514941741,1.21323370005633,1.08939722046203,0.949082476444386,1.61797569792197,0.784885860501384,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.368965315629341,0,0.768251997860379,0,0.603173834469785,0.185176890317059,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0.462985512576611,0.190254152234598,0,1.71697232418975,0,0,0,0,0.16798212819886,0.283550194484773,0.53735113621709,0,1.15014803749563,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.336393253036082,0,0,0.258543431515556,3.57656445851882,0,0,0,0.514414748524284,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.299918973546171,1.2162378064119,0,0,0,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0.112085143993527,0.985153801009636,1.2937654491571,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,1.28073069364133,0.606255142892519,0,0.604780586659361,0.248107807818777,0,0,0.512556597022804,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0.464841513839837,0.362578348774867,0.601519410909855,0.184161977871793,0.34444334449382,0.364182336013434,0,1.80479845162965,2.0794141018192,2.35304930753057,2.92278449306521,0.73886140225013,0,0.510281115829547,0.431831832204279,1.54227252690289,1.08378575017541,1.00337954770971,1.78413391131527,4.15538004464362,1.11937377361089,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.247528499761764,1.14853107599234,0.650060246036521,0,0,0.462145851343933,0.307007349452259,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0.495854746082934,0.960950336825531,0.510450849978337,0.30347334256665,0.464845549297286,0.31481234683064,0.6970372701606,0,0,1.73986598415015,0,0.572499546967965,0.372158369359667,0.632758849437452,0,0,0,0.636406495851874,0,0,0.274537029736055,0.235624804691373,0.606547444719948,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0.551365343546124,1.99031692572366,0.438450885253763,0,0,0.608731130888112,0.6196469961995,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0,0,0,1.82822014178473,4.02181365321472,0,0.0941438007767792,1.29151611801369,3.36942951335251,1.33029046061003,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.640944426764839,0,0.245040215981032,0.185803175125719,0,0.213425530045242,0.318852545457645,0.199579371432817,0.383010740264733,0,0.649243880549111,0,0,0.15667989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| |||
|short_description=p5@THAP7 | |||
}} |
Latest revision as of 05:47, 19 September 2015
Short description: | p5@THAP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_THAP7_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000488975_5end |
EntrezGene: | THAP7 |
HGNC: | 23190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.00e-21 | 10 |
nephron tubule epithelial cell | 5.00e-21 | 10 |
epithelial cell of nephron | 2.25e-20 | 15 |
kidney cell | 1.13e-17 | 17 |
kidney epithelial cell | 1.13e-17 | 17 |
kidney cortical cell | 4.32e-17 | 12 |
renal cortical epithelial cell | 4.32e-17 | 12 |
epithelial cell of tracheobronchial tree | 3.50e-11 | 9 |
epithelial cell of lower respiratory tract | 3.50e-11 | 9 |
bronchial epithelial cell | 1.29e-09 | 3 |
brush border epithelial cell | 4.29e-09 | 3 |
kidney cortex tubule cell | 4.29e-09 | 3 |
epithelial cell of proximal tubule | 4.29e-09 | 3 |
epithelial cell | 2.10e-08 | 253 |
respiratory epithelial cell | 1.73e-07 | 13 |
Merkel cell | 2.47e-07 | 2 |
transitional epithelial cell | 7.97e-07 | 4 |
urothelial cell | 7.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.00e-21 | 10 |
nephron epithelium | 2.25e-20 | 15 |
renal tubule | 2.25e-20 | 15 |
nephron tubule | 2.25e-20 | 15 |
nephron | 2.25e-20 | 15 |
uriniferous tubule | 2.25e-20 | 15 |
nephrogenic mesenchyme | 2.25e-20 | 15 |
excretory tube | 6.14e-19 | 16 |
kidney epithelium | 6.14e-19 | 16 |
cortex of kidney | 4.32e-17 | 12 |
renal parenchyma | 4.32e-17 | 12 |
parenchyma | 2.01e-16 | 15 |
kidney | 6.04e-15 | 26 |
kidney mesenchyme | 6.04e-15 | 26 |
upper urinary tract | 6.04e-15 | 26 |
kidney rudiment | 6.04e-15 | 26 |
kidney field | 6.04e-15 | 26 |
cortex | 2.64e-13 | 15 |
cavitated compound organ | 4.97e-12 | 31 |
urinary system structure | 4.97e-11 | 47 |
renal system | 1.02e-10 | 48 |
trunk region element | 1.69e-10 | 101 |
lower respiratory tract epithelium | 1.29e-09 | 3 |
epithelium of bronchus | 1.29e-09 | 3 |
renal cortex tubule | 4.29e-09 | 3 |
region of nephron tubule | 4.29e-09 | 3 |
proximal tubule | 4.29e-09 | 3 |
subdivision of trunk | 5.99e-09 | 112 |
respiratory primordium | 8.74e-08 | 38 |
endoderm of foregut | 8.74e-08 | 38 |
abdomen element | 9.15e-08 | 54 |
abdominal segment element | 9.15e-08 | 54 |
larynx | 5.54e-07 | 9 |
segment of respiratory tract | 7.26e-07 | 47 |