FFCP PHASE1:Hg19::chr20:36758421..36758453,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11778 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_M98479_5end | |||
|cluster_id=chr20:36758421..36758453,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_9_at_TGM2_5end | |||
|id=chr20:36758421..36758453,- | |||
|ontology_enrichment_celltype=CL:0000222!7.58e-12!119;CL:0000115!5.51e-11!35;CL:0002078!6.76e-10!44;CL:0002139!1.68e-09!24;CL:0000192!2.70e-08!42;CL:0000514!2.70e-08!42;CL:0000213!8.32e-08!57;CL:0000215!8.32e-08!57;CL:0000071!7.87e-07!18;CL:0002546!7.87e-07!18;CL:0000359!8.93e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.12e-15;19!CL:0000115;1.49e-09;36!CL:0000359;2.57e-08;32!CL:0002577;8.04e-08;3!CL:0002595;1.26e-07;5!CL:1000746;1.55e-07;7!CL:1000612;1.55e-07;7!CL:0002541;1.74e-07;3!CL:0002188;2.25e-07;5!CL:0000192;4.51e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.65e-15,19;CL:0000115,8.36e-11,36;CL:0000222,1.33e-09,121;CL:0000192,1.75e-08,43;CL:0000514,1.75e-08,43;CL:0000359,2.90e-08,32;CL:0002577,7.18e-08,3;CL:0002078,7.58e-08,45;CL:0002595,8.56e-08,5;CL:1000746,1.46e-07,7;CL:1000612,1.46e-07,7;CL:0002541,1.61e-07,3;CL:0002188,2.30e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;4.51e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.33e-20!79;UBERON:0007798!4.33e-20!79;UBERON:0003914!3.25e-18!118;UBERON:0000055!1.64e-17!69;UBERON:0000477!1.21e-16!286;UBERON:0004872!3.09e-16!84;UBERON:0001009!3.28e-15!113;UBERON:0001981!2.54e-14!60;UBERON:0007500!2.54e-14!60;UBERON:0004537!2.54e-14!60;UBERON:0006965!2.54e-14!60;UBERON:0004111!5.36e-14!241;UBERON:0004535!6.04e-14!110;UBERON:0000490!3.57e-13!138;UBERON:0000119!4.01e-11!312;UBERON:0000468!8.97e-11!659;UBERON:0000483!1.36e-10!309;UBERON:0005631!1.78e-10!14;UBERON:0000158!1.78e-10!14;UBERON:0000025!4.74e-10!194;UBERON:0005256!9.29e-10!143;UBERON:0000467!1.19e-09!625;UBERON:0002100!1.38e-09!216;UBERON:0000480!1.58e-09!626;UBERON:0001637!4.33e-09!42;UBERON:0003509!4.33e-09!42;UBERON:0004572!4.33e-09!42;UBERON:0000481!6.45e-09!347;UBERON:0000478!1.15e-08!24;UBERON:0000926!7.48e-08!448;UBERON:0004120!7.48e-08!448;UBERON:0006603!7.48e-08!448;UBERON:0003104!1.95e-07!238;UBERON:0009142!1.95e-07!238;UBERON:0002050!2.13e-07!605;UBERON:0005423!2.13e-07!605;UBERON:0003124!2.16e-07!7;UBERON:0000922!2.98e-07!612;UBERON:0000923!3.31e-07!604;UBERON:0005291!3.31e-07!604;UBERON:0006598!3.31e-07!604;UBERON:0002532!3.31e-07!604;UBERON:0001986!7.87e-07!18;UBERON:0004638!7.87e-07!18;UBERON:0004852!7.87e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.72e-13;24!UBERON:0003513;1.80e-11;7!UBERON:0005631;2.64e-10;10!UBERON:0000158;2.64e-10;10!UBERON:0001987;1.29e-09;4!UBERON:0001637;7.06e-09;42!UBERON:0003509;7.06e-09;42!UBERON:0004572;7.06e-09;42!UBERON:0003914;1.05e-08;74!UBERON:0000055;5.26e-08;65!UBERON:0007500;8.31e-08;56!UBERON:0001981;8.31e-08;56!UBERON:0004537;8.31e-08;56!UBERON:0002049;9.06e-08;75!UBERON:0007798;9.06e-08;75!UBERON:0003834;1.26e-07;5!UBERON:0001533;1.26e-07;5!UBERON:0000074;1.55e-07;7!UBERON:0001229;1.55e-07;7!UBERON:0003124;1.74e-07;3!UBERON:0000920;1.74e-07;3!UBERON:0000077;2.75e-07;27!UBERON:0004573;4.65e-07;33!UBERON:0004571;4.65e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.78e-18,14;UBERON:0000158,7.78e-18,14;UBERON:0003914,4.22e-16,117;UBERON:0004872,1.07e-15,83;UBERON:0002049,1.16e-15,78;UBERON:0007798,1.16e-15,78;UBERON:0003124,1.61e-15,7;UBERON:0000055,7.24e-15,68;UBERON:0007500,8.06e-14,59;UBERON:0001981,8.06e-14,59;UBERON:0004537,8.06e-14,59;UBERON:0006965,8.06e-14,59;UBERON:0000478,3.44e-13,24;UBERON:0000490,7.38e-13,148;UBERON:0001009,5.43e-12,112;UBERON:0003513,1.15e-11,7;UBERON:0001637,1.24e-11,42;UBERON:0003509,1.24e-11,42;UBERON:0004572,1.24e-11,42;UBERON:0004535,1.49e-11,109;UBERON:0005256,2.45e-10,122;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0000926,4.95e-09,315;UBERON:0004120,4.95e-09,315;UBERON:0006603,4.95e-09,315;UBERON:0003104,1.63e-08,160;UBERON:0009142,1.63e-08,160;UBERON:0007503,5.69e-08,78;UBERON:0004111,6.95e-08,240;UBERON:0003834,8.56e-08,5;UBERON:0001533,8.56e-08,5;UBERON:0004573,9.48e-08,33;UBERON:0004571,9.48e-08,33;UBERON:0003081,1.39e-07,203;UBERON:0010532,1.46e-07,7;UBERON:0000074,1.46e-07,7;UBERON:0001229,1.46e-07,7;UBERON:0001230,1.46e-07,7;UBERON:0003220,1.46e-07,7;UBERON:0005749,1.46e-07,7;UBERON:0004199,1.46e-07,7;UBERON:0004209,1.46e-07,7;UBERON:0004198,1.46e-07,7;UBERON:0000920,1.61e-07,3;UBERON:0004923,1.63e-07,66;UBERON:0000483,2.75e-07,306;UBERON:0000119,4.31e-07,309;UBERON:0000025,6.15e-07,192;UBERON:0002100,8.76e-07,199 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,1.0007329835313,1.78784437770915,0.872338524100369,2.53299878168311,0,0,0,4.18680700783456,1.96597234917155,6.06664049925443,0.123766352960047,0,0,0.602694528023977,0,1.46379839637152,0.246242116153576,1.42800483870977,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,3.54767035940102,3.16205228495254,0.392937226493138,0,0,0,0,1.46253756570752,0,0,0,0.198762407366705,0,0.347140501607594,1.69592382577203,0.838998872419812,5.22724279686128,2.71693456497854,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,1.46437234528902,1.47065232138347,1.62028389576352,1.60739510911344,0.673588117878509,0.225222960966644,0,0.949265659568129,1.09921046358244,0,0,0,0,0.886413581652058,0,0.286836620748814,0,0,2.1349799145941,2.71334303258876,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0.298897361103602,0,0,0,0.816616685019573,0.122834317311768,0.619954687054593,1.18800285728205,0.494533858557114,0.910161361938026,2.15585442544872,0,0.125118519871964,0,0,1.22595118319608,0.45071417671979,0.340296549480063,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0.194874010322397,0.504867548488229,0,0,0,0,0.169560592310488,0,1.36373060295417,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,1.38134921352481,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,3.69077727312324,4.20725321410337,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0,1.3725424823882,0.219500570817251,0,0,0,0,0,4.3299402607582,0,0.821860859650752,0.866198686566443,1.85194205030644,2.66355813128438,0,0,0,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.517086863031111,0,0,6.11657668145202,5.2003718455683,0,0,0,2.00169191121407,4.34097284313154,3.29296134712308,0,3.19852753868291,0.791951872933429,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,3.50119364741774,0,1.87173775377726,3.03329280955175,0.315404830067869,0.819989904948992,0,4.5481500811197,0,0,0.737476674166813,0.347534457872331,0,0,0,0,0,2.72814814301633,11.6504807657348,18.4458078931105,0,0.306923946576125,0,0,1.02341449813341,0.482561763430822,0,0.616838775210622,1.06537035187876,0.0821271560138091,0.519254429183621,0.116210378459959,0.241718899183244,3.40860999515584,0,0.68888668898764,0.728364672026868,2.09799063935079,0,0.15403067420883,0,0,0.422206515571503,6.8240030442538,1.53084334748864,0.431831832204279,3.08454505380579,0.812839312631559,1.50506932156456,0,0.831076008928724,0.447749509444357,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0.384380134730212,0,0,2.78907329578371,1.25924938732256,0.6970372701606,0,0,0,4.44778125849408,0.715624433709956,0,0.949138274156178,0.38126038784765,0.255897791311334,0,0,0,0.539617372749944,1.64722217841633,0.471249609382746,1.01091240786658,9.5106192703805,0,0,1.94970791705028,8.45201174054043,0.9554993798559,1.41405431953713,1.13008116620243,0,5.97095077717098,13.1535265576129,0,1.9676842561399,0.608731130888112,3.717881977197,3.66204283291914,0.717056761020258,0.88424136911809,0,0,0,0.987884678879706,0,0.349934720244983,0,0.670302275535787,1.08890984861323,1.41215701165169,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,1.42068073403207,0.95497793895076,0,0.921482106297696,0,0,1.55832187032068,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0.898683511473268,0.179021174675609,0,0.197286811273867,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.692552326534174,0.227884111694002,0,0,0,3.82801391678303,2.1983422416447,5.86338253620498,0,0,0.166211681900156,0,0,0,0,0,1.68798451622422,0.326465616318295,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.63186579628488,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.484945082442097,0.0882561266915003,1.58186518546373,0.274083849293502,0,0,0,0.400794101257669,1.49417096317547,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,2.15361907373044,0.998395002494955,3.43380838509257,0.446342914883745,0.604651252380536,0.720599767084807,0,0,0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| |||
|short_description=p9@TGM2 | |||
}} |
Latest revision as of 02:50, 16 September 2015
Short description: | p9@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TGM2_5end |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | 0bp_to_M98479_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.65e-15 | 19 |
endothelial cell | 8.36e-11 | 36 |
mesodermal cell | 1.33e-09 | 121 |
smooth muscle cell | 1.75e-08 | 43 |
smooth muscle myoblast | 1.75e-08 | 43 |
vascular associated smooth muscle cell | 2.90e-08 | 32 |
placental epithelial cell | 7.18e-08 | 3 |
meso-epithelial cell | 7.58e-08 | 45 |
smooth muscle cell of the subclavian artery | 8.56e-08 | 5 |
glomerular cell | 1.46e-07 | 7 |
kidney corpuscule cell | 1.46e-07 | 7 |
chorionic membrane mesenchymal stem cell | 1.61e-07 | 3 |
glomerular endothelial cell | 2.30e-07 | 5 |