FFCP PHASE1:Hg19::chr1:21995905..21995916,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9858 | |||
|TSSclassifier=strong | |||
|UniProt=P47736 | |||
|association_with_transcript=-49bp_to_ENST00000542643,NM_001145657,NM_002885,uc001bex.2,uc001bey.2_5end | |||
|cluster_id=chr1:21995905..21995916,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_RAP1GAP_5end | |||
|id=chr1:21995905..21995916,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.51e-10;2!CL:0000558;5.51e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.52e-10,2;CL:0000765,5.52e-10,2;CL:0000050,5.52e-10,2;CL:0000038,5.52e-10,2;CL:0000558,5.52e-10,2;CL:0000547,5.52e-10,2;CL:0000549,5.52e-10,2;CL:0000550,5.52e-10,2;CL:0000552,5.52e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.76e-10;2!UBERON:0006601;1.29e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.10e-39!115;UBERON:0001049!1.20e-37!57;UBERON:0005068!1.20e-37!57;UBERON:0006241!1.20e-37!57;UBERON:0007135!1.20e-37!57;UBERON:0002780!6.08e-34!41;UBERON:0001890!6.08e-34!41;UBERON:0006240!6.08e-34!41;UBERON:0003080!7.16e-33!42;UBERON:0001893!2.07e-32!34;UBERON:0002020!2.82e-32!34;UBERON:0003528!2.82e-32!34;UBERON:0002616!3.13e-32!59;UBERON:0002791!5.66e-31!33;UBERON:0001869!2.48e-30!32;UBERON:0000955!1.89e-28!69;UBERON:0006238!1.89e-28!69;UBERON:0001017!3.16e-27!82;UBERON:0002346!3.94e-27!90;UBERON:0005743!1.44e-26!86;UBERON:0003075!1.62e-26!86;UBERON:0007284!1.62e-26!86;UBERON:0000073!4.59e-25!94;UBERON:0001016!4.59e-25!94;UBERON:0002619!5.87e-24!22;UBERON:0003056!7.14e-22!61;UBERON:0001950!2.82e-21!20;UBERON:0000956!2.18e-20!25;UBERON:0000203!2.18e-20!25;UBERON:0000153!3.74e-15!129;UBERON:0007811!3.74e-15!129;UBERON:0002420!1.66e-14!9;UBERON:0007245!1.66e-14!9;UBERON:0010009!1.66e-14!9;UBERON:0010011!1.66e-14!9;UBERON:0000454!1.66e-14!9;UBERON:0000033!4.94e-14!123;UBERON:0002308!6.16e-14!9;UBERON:0000125!6.16e-14!9;UBERON:0009663!1.32e-11!7;UBERON:0000924!1.92e-10!173;UBERON:0006601!1.92e-10!173;UBERON:0000025!4.41e-10!194;UBERON:0000200!4.41e-10!6;UBERON:0004121!7.08e-10!169;UBERON:0000349!7.88e-09!5;UBERON:0001872!4.52e-08!5;UBERON:0000369!6.51e-08!4;UBERON:0002435!6.51e-08!4;UBERON:0000204!6.51e-08!4;UBERON:0010082!6.51e-08!4;UBERON:0001871!2.40e-07!7;UBERON:0000483!5.30e-07!309;UBERON:0004111!6.80e-07!241;UBERON:0000119!8.99e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.08e-52;32!UBERON:0002791;1.40e-49;32!UBERON:0001893;1.65e-48;34!UBERON:0003528;2.67e-48;34!UBERON:0002020;2.67e-48;34!UBERON:0002619;2.63e-41;22!UBERON:0001950;1.05e-39;20!UBERON:0002780;6.14e-39;41!UBERON:0001890;6.14e-39;41!UBERON:0000956;4.27e-36;25!UBERON:0000203;4.27e-36;25!UBERON:0000073;7.06e-32;53!UBERON:0002616;7.06e-32;53!UBERON:0002420;4.77e-29;9!UBERON:0007245;4.77e-29;9!UBERON:0010009;4.77e-29;9!UBERON:0010011;4.77e-29;9!UBERON:0000454;4.77e-29;9!UBERON:0000200;8.00e-24;6!UBERON:0000955;3.05e-23;68!UBERON:0000125;3.31e-22;9!UBERON:0002308;3.31e-22;9!UBERON:0009663;1.13e-21;7!UBERON:0001017;1.21e-21;75!UBERON:0000369;3.20e-18;4!UBERON:0002435;3.20e-18;4!UBERON:0000204;3.20e-18;4!UBERON:0001016;2.09e-16;83!UBERON:0007023;1.89e-15;114!UBERON:0001871;2.49e-14;6!UBERON:0005383;3.96e-14;3!UBERON:0005382;3.96e-14;3!UBERON:0000349;7.29e-14;5!UBERON:0001870;7.08e-13;3!UBERON:0001873;5.76e-10;2!UBERON:0000178;2.76e-09;15!UBERON:0000179;2.76e-09;15!UBERON:0000463;2.76e-09;15!UBERON:0001876;3.45e-09;2!UBERON:0002702;4.15e-09;2!UBERON:0002771;6.23e-09;2!UBERON:0001875;6.23e-09;2!UBERON:0006514;6.23e-09;2!UBERON:0001872;8.48e-08;5!UBERON:0002021;1.27e-07;5!UBERON:0011216;3.94e-07;132!UBERON:0002680;4.18e-07;9!UBERON:0001895;4.18e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.44e-60,32;UBERON:0000073,6.35e-57,53;UBERON:0002616,6.35e-57,53;UBERON:0001893,8.93e-57,34;UBERON:0003528,1.61e-56,34;UBERON:0002020,1.61e-56,34;UBERON:0002780,1.37e-55,41;UBERON:0001890,1.37e-55,41;UBERON:0003080,1.37e-55,41;UBERON:0006240,1.37e-55,41;UBERON:0002791,4.17e-55,32;UBERON:0001049,1.49e-53,56;UBERON:0005068,1.49e-53,56;UBERON:0006241,1.49e-53,56;UBERON:0007135,1.49e-53,56;UBERON:0007023,7.25e-52,114;UBERON:0000955,6.73e-49,68;UBERON:0006238,6.73e-49,68;UBERON:0001017,6.00e-43,81;UBERON:0002619,2.31e-41,22;UBERON:0001016,1.40e-40,89;UBERON:0001950,8.81e-40,20;UBERON:0000956,3.81e-36,25;UBERON:0000203,3.81e-36,25;UBERON:0003056,1.25e-35,61;UBERON:0003075,1.51e-34,82;UBERON:0007284,1.51e-34,82;UBERON:0002346,1.24e-32,86;UBERON:0002420,2.43e-29,9;UBERON:0007245,2.43e-29,9;UBERON:0010009,2.43e-29,9;UBERON:0010011,2.43e-29,9;UBERON:0000454,2.43e-29,9;UBERON:0010371,7.90e-26,104;UBERON:0010314,5.98e-24,132;UBERON:0000200,6.57e-24,6;UBERON:0000125,2.42e-22,9;UBERON:0002308,2.42e-22,9;UBERON:0009663,8.54e-22,7;UBERON:0000369,3.21e-18,4;UBERON:0002435,3.21e-18,4;UBERON:0000204,3.21e-18,4;UBERON:0010082,3.21e-18,4;UBERON:0004121,8.74e-18,171;UBERON:0000924,8.74e-18,171;UBERON:0006601,8.74e-18,171;UBERON:0011216,4.10e-15,223;UBERON:0001871,1.85e-14,6;UBERON:0005383,3.97e-14,3;UBERON:0005382,3.97e-14,3;UBERON:0000349,5.43e-14,5;UBERON:0001870,7.70e-13,3;UBERON:0000025,5.50e-12,192;UBERON:0001873,5.77e-10,2;UBERON:0010122,5.77e-10,2;UBERON:0001876,2.24e-09,2;UBERON:0000178,2.76e-09,15;UBERON:0000179,2.76e-09,15;UBERON:0000463,2.76e-09,15;UBERON:0002702,3.83e-09,2;UBERON:0001875,4.51e-09,2;UBERON:0006514,4.51e-09,2;UBERON:0002771,7.33e-09,2;UBERON:0004111,3.03e-08,240;UBERON:0001872,1.05e-07,5;UBERON:0002021,1.08e-07,5;UBERON:0002680,5.20e-07,9;UBERON:0001895,5.20e-07,9;UBERON:0010092,5.20e-07,9;UBERON:0000483,6.54e-07,306;UBERON:0000119,8.94e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.95264877478,17.5161752186683,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,4.58782324285425,1.13929437434833,0,0,0.648473311192717,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,4.92342957436795,0,0,0,0.19924798825107,0,2.01546198283421,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,3.87733098438087,1.29875337426592,0,0,0,0,0,0,0,0.344743373241465,0,0,8.85741385813839,44.6206822914009,0,1.21637185924347,1.18219047581419,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.451191321234361,1.37243774022418,1.00692952185506,0.75901493089674,0.953619473882272,0,0,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,10.0733711661896,0,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,2.21587785845575,0,0,0,0,0.864542502924636,0,0.514784993585894,0,0,0,0,0,0,0,1.80126086612937,2.60120219894787,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0.630265458457789,0.494495150286999,0.606631894687664,0.196854963029498,0,0.795229689809303,4.08610218334727,0,0,0,0,0,3.40197517284938,0,0.394028536495991,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,3.97520666736664,0.387848869084652,1.71902382265497,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,3.004582336956,0,0.665574309221114,0.807253238237985,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.247871528518004,1.11728983594649,0,0,0.80057074828547,0,0,13.0385326945813,0,1.75597244962866,2.2562800066483,0.252071696221718,1.9364030689981,2.26065903884592,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.97165372320936,0.781078098613847,1.03343398250592,2.34638497717455,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.532214220975833,0,0,2.17503145525861,2.36781984826257,0,0,0.078493092850514,34.7225453714364,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0.233939463462106,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0.471353094203252,0.196308467114945,0,0.8453114551668,0,0,2.90060495881097,0,0,0,0,0,0,0.286679166302903,0,2.65166811744567,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,3.10298987585686,0.426467963801962,0.714193294391221,0,0.186224142887574,0,2.48223917284843,1.81905470062397,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p4@RAP1GAP | |||
}} |
Latest revision as of 06:06, 25 September 2015
Short description: | p4@RAP1GAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAP1GAP_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -49bp_to_ENST00000542643, NM_001145657, NM_002885, uc001bex.2, uc001bey.2_5end |
EntrezGene: | RAP1GAP |
HGNC: | 9858 |
UniProt: | P47736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.52e-10 | 2 |
erythroblast | 5.52e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 5.52e-10 | 2 |
erythroid progenitor cell | 5.52e-10 | 2 |
reticulocyte | 5.52e-10 | 2 |
proerythroblast | 5.52e-10 | 2 |
basophilic erythroblast | 5.52e-10 | 2 |
polychromatophilic erythroblast | 5.52e-10 | 2 |
orthochromatic erythroblast | 5.52e-10 | 2 |