FFCP PHASE1:Hg19::chr1:182653685..182653730,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16810 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000515211_5end | |||
|cluster_id=chr1:182653685..182653730,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_RGS8_5end | |||
|id=chr1:182653685..182653730,- | |||
|ontology_enrichment_celltype=CL:0000128!1.90e-08!7;CL:0000126!1.90e-08!7;CL:0000127!1.90e-08!7;CL:0002453!1.90e-08!7;CL:0002605!7.17e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.96e-16;82!UBERON:0006215;9.54e-14;3!UBERON:0010122;1.33e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.94e-116!57;UBERON:0005068!3.94e-116!57;UBERON:0006241!3.94e-116!57;UBERON:0007135!3.94e-116!57;UBERON:0001017!2.23e-100!82;UBERON:0002616!5.38e-99!59;UBERON:0005743!6.13e-99!86;UBERON:0000955!2.73e-93!69;UBERON:0006238!2.73e-93!69;UBERON:0003075!1.45e-92!86;UBERON:0007284!1.45e-92!86;UBERON:0000073!8.54e-92!94;UBERON:0001016!8.54e-92!94;UBERON:0002346!7.57e-88!90;UBERON:0002780!2.00e-86!41;UBERON:0001890!2.00e-86!41;UBERON:0006240!2.00e-86!41;UBERON:0003080!3.71e-84!42;UBERON:0001893!2.79e-83!34;UBERON:0002020!3.28e-83!34;UBERON:0003528!3.28e-83!34;UBERON:0002791!1.24e-80!33;UBERON:0001869!1.43e-78!32;UBERON:0003056!3.28e-68!61;UBERON:0000956!1.90e-59!25;UBERON:0000203!1.90e-59!25;UBERON:0000033!3.30e-58!123;UBERON:0000153!7.15e-55!129;UBERON:0007811!7.15e-55!129;UBERON:0002619!4.45e-53!22;UBERON:0004121!1.62e-52!169;UBERON:0000924!5.73e-51!173;UBERON:0006601!5.73e-51!173;UBERON:0001950!6.16e-48!20;UBERON:0007023!1.26e-45!115;UBERON:0003076!3.97e-31!15;UBERON:0003057!3.97e-31!15;UBERON:0000025!3.55e-26!194;UBERON:0002420!3.68e-25!9;UBERON:0007245!3.68e-25!9;UBERON:0010009!3.68e-25!9;UBERON:0010011!3.68e-25!9;UBERON:0000454!3.68e-25!9;UBERON:0004733!8.62e-25!12;UBERON:0002028!8.62e-25!12;UBERON:0007277!8.62e-25!12;UBERON:0002308!1.28e-24!9;UBERON:0000125!1.28e-24!9;UBERON:0004732!1.09e-22!13;UBERON:0009663!8.45e-20!7;UBERON:0004111!1.81e-18!241;UBERON:0002680!3.76e-18!9;UBERON:0001895!3.76e-18!9;UBERON:0010092!3.76e-18!9;UBERON:0000064!3.21e-17!219;UBERON:0000483!3.30e-17!309;UBERON:0000119!6.65e-17!312;UBERON:0000477!8.74e-17!286;UBERON:0001871!1.93e-16!7;UBERON:0000200!7.88e-16!6;UBERON:0002298!1.51e-15!8;UBERON:0000475!2.07e-15!365;UBERON:0000349!7.04e-15!5;UBERON:0001872!1.12e-13!5;UBERON:0002021!1.18e-13!5;UBERON:0000369!8.63e-13!4;UBERON:0002435!8.63e-13!4;UBERON:0000204!8.63e-13!4;UBERON:0010082!8.63e-13!4;UBERON:0002037!6.70e-11!6;UBERON:0006215!6.70e-11!6;UBERON:0000062!3.21e-10!511;UBERON:0005383!4.97e-10!3;UBERON:0005382!4.97e-10!3;UBERON:0000988!3.58e-09!3;UBERON:0000481!8.70e-09!347;UBERON:0006331!1.27e-08!3;UBERON:0002771!1.57e-08!3;UBERON:0001896!2.33e-08!3;UBERON:0005290!2.33e-08!3;UBERON:0010096!2.33e-08!3;UBERON:0000922!4.72e-08!612;UBERON:0002240!5.43e-08!3;UBERON:0001873!3.34e-07!2;UBERON:0010122!3.34e-07!2;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0002050!3.92e-07!605;UBERON:0005423!3.92e-07!605;UBERON:0001876!4.73e-07!2;UBERON:0000467!5.46e-07!625;UBERON:0000480!5.96e-07!626;UBERON:0001897!9.62e-07!2;UBERON:0001954!9.90e-07!2;UBERON:0003022!9.90e-07!2;UBERON:0002421!9.90e-07!2;UBERON:0002600!9.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.10e-59;32!UBERON:0001893;4.66e-59;34!UBERON:0002780;7.85e-58;41!UBERON:0001890;7.85e-58;41!UBERON:0003528;2.60e-57;34!UBERON:0002020;2.60e-57;34!UBERON:0002791;2.76e-56;32!UBERON:0000073;9.28e-51;53!UBERON:0002616;9.28e-51;53!UBERON:0002619;1.38e-45;22!UBERON:0000956;6.85e-40;25!UBERON:0000203;6.85e-40;25!UBERON:0000955;4.28e-39;68!UBERON:0001950;2.90e-38;20!UBERON:0001017;8.25e-34;75!UBERON:0002420;6.24e-32;9!UBERON:0007245;6.24e-32;9!UBERON:0010009;6.24e-32;9!UBERON:0010011;6.24e-32;9!UBERON:0000454;6.24e-32;9!UBERON:0000125;3.74e-31;9!UBERON:0002308;3.74e-31;9!UBERON:0001016;6.22e-30;83!UBERON:0009663;1.71e-23;7!UBERON:0000349;8.16e-23;5!UBERON:0000369;1.53e-19;4!UBERON:0002435;1.53e-19;4!UBERON:0000204;1.53e-19;4!UBERON:0002680;5.71e-17;9!UBERON:0001895;5.71e-17;9!UBERON:0004733;8.36e-17;12!UBERON:0002028;8.36e-17;12!UBERON:0007023;2.38e-16;114!UBERON:0001871;5.74e-16;6!UBERON:0004732;1.93e-15;13!UBERON:0005383;4.05e-15;3!UBERON:0005382;4.05e-15;3!UBERON:0002021;5.14e-14;5!UBERON:0000988;9.54e-14;3!UBERON:0002298;1.09e-11;6!UBERON:0011216;1.53e-11;132!UBERON:0001873;1.33e-10;2!UBERON:0001894;2.49e-10;7!UBERON:0001876;2.54e-10;2!UBERON:0001897;8.22e-10;2!UBERON:0001954;8.22e-10;2!UBERON:0003022;8.22e-10;2!UBERON:0002421;8.22e-10;2!UBERON:0010225;8.22e-10;2!UBERON:0002600;8.22e-10;2!UBERON:0001875;9.81e-10;2!UBERON:0006514;9.81e-10;2!UBERON:0002148;1.89e-09;2!UBERON:0006331;1.89e-09;2!UBERON:0009662;1.89e-09;2!UBERON:0001872;1.40e-08;5!UBERON:0010314;4.54e-08;132!UBERON:0000200;4.26e-07;6!UBERON:0002037;4.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.91e-93,53;UBERON:0002616,5.91e-93,53;UBERON:0001049,1.16e-87,56;UBERON:0005068,1.16e-87,56;UBERON:0006241,1.16e-87,56;UBERON:0007135,1.16e-87,56;UBERON:0000955,1.75e-83,68;UBERON:0006238,1.75e-83,68;UBERON:0002780,8.13e-77,41;UBERON:0001890,8.13e-77,41;UBERON:0003080,8.13e-77,41;UBERON:0006240,8.13e-77,41;UBERON:0001017,3.28e-73,81;UBERON:0001016,5.79e-69,89;UBERON:0001893,6.88e-68,34;UBERON:0003528,8.26e-68,34;UBERON:0002020,8.26e-68,34;UBERON:0001869,2.03e-66,32;UBERON:0003075,2.28e-65,82;UBERON:0007284,2.28e-65,82;UBERON:0002346,5.34e-62,86;UBERON:0002791,1.41e-60,32;UBERON:0003056,5.61e-58,61;UBERON:0010371,5.23e-50,104;UBERON:0002619,1.23e-45,22;UBERON:0007023,3.00e-45,114;UBERON:0010314,3.96e-40,132;UBERON:0000956,6.17e-40,25;UBERON:0000203,6.17e-40,25;UBERON:0001950,2.74e-38,20;UBERON:0004121,1.08e-36,171;UBERON:0000924,1.08e-36,171;UBERON:0006601,1.08e-36,171;UBERON:0002420,6.24e-32,9;UBERON:0007245,6.24e-32,9;UBERON:0010009,6.24e-32,9;UBERON:0010011,6.24e-32,9;UBERON:0000454,6.24e-32,9;UBERON:0000125,3.74e-31,9;UBERON:0002308,3.74e-31,9;UBERON:0011216,5.17e-26,223;UBERON:0009663,1.85e-23,7;UBERON:0000349,6.82e-23,5;UBERON:0000025,1.96e-20,192;UBERON:0000369,1.53e-19,4;UBERON:0002435,1.53e-19,4;UBERON:0000204,1.53e-19,4;UBERON:0010082,1.53e-19,4;UBERON:0002680,6.40e-17,9;UBERON:0001895,6.40e-17,9;UBERON:0010092,6.40e-17,9;UBERON:0004733,9.94e-17,12;UBERON:0002028,9.94e-17,12;UBERON:0007277,9.94e-17,12;UBERON:0001871,5.57e-16,6;UBERON:0004732,2.26e-15,13;UBERON:0005383,4.06e-15,3;UBERON:0005382,4.06e-15,3;UBERON:0004111,8.06e-15,240;UBERON:0002021,4.97e-14,5;UBERON:0000988,9.54e-14,3;UBERON:0003076,3.36e-13,15;UBERON:0003057,3.36e-13,15;UBERON:0000483,8.13e-12,306;UBERON:0002298,1.19e-11,6;UBERON:0000119,1.27e-11,309;UBERON:0001873,1.33e-10,2;UBERON:0010122,1.33e-10,2;UBERON:0001876,2.32e-10,2;UBERON:0001894,2.55e-10,7;UBERON:0006222,2.55e-10,7;UBERON:0001897,7.19e-10,2;UBERON:0010225,7.19e-10,2;UBERON:0001954,7.52e-10,2;UBERON:0003022,7.52e-10,2;UBERON:0002421,7.52e-10,2;UBERON:0002600,7.52e-10,2;UBERON:0001875,1.07e-09,2;UBERON:0006514,1.07e-09,2;UBERON:0002148,1.74e-09,2;UBERON:0006331,1.74e-09,2;UBERON:0009662,1.74e-09,2;UBERON:0001872,1.40e-08,5;UBERON:0000923,3.93e-07,560;UBERON:0010316,3.93e-07,560;UBERON:0005291,3.93e-07,560;UBERON:0006598,3.93e-07,560;UBERON:0010317,3.93e-07,560;UBERON:0002532,3.93e-07,560;UBERON:0000200,4.00e-07,6;UBERON:0002037,4.64e-07,6;UBERON:0006215,4.64e-07,6;UBERON:0002050,5.12e-07,564;UBERON:0000922,5.70e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,5.91245065372892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,8.44016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75466196876175,1.39152147242777,5.98841394003583,0,0,0,0,0,0,0,0,0,16.8290863304629,23.0339197774529,3.05163472634166,1.21637185924347,8.57088094965288,5.48463492884931,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29163852134302,0,25.7690890297873,0,0,0,0,0,3.67287313956588,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6657274121028,0,0,4.43175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40588404193705,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1332156573302,1.77064427945048,0,0,0,0,0,10.9349201984444,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,3.17358244182456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,3.17268288745104,0.500763722825999,0.573409195690071,0.665574309221114,1.17983165588629,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23474434190045,0,0,0,0,0,0,0,0,0,0,0,21.7737073076998,2.8339315265117,0.478901577171454,5.33302547025963,2.7727886584389,2.83544735103293,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91717990786689,0.781078098613847,0.413373593002368,2.34638497717455,12.580420607419,0,0,0,0,0,0,0,1.13831095675649,0,0,0,8.22433769019664,3.81482086664525,0,0,0,36.1365856806804,0,0,0,0,7.43356059437226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,5.77927666622775,2.61810414204226,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,7.46252495512901,2.99955687999496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@RGS8 | |||
}} |
Latest revision as of 01:29, 19 September 2015
Short description: | p1@RGS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS8_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000515211_5end |
EntrezGene: | RGS8 |
HGNC: | 16810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data