FFCP PHASE1:Hg19::chr8:80992779..80992802,-: Difference between revisions
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|id=chr8:80992779..80992802,-
|short_description=p12@TPD52
|description=CAGE_peak_12_at_TPD52_5end
|association_with_transcript=45bp_to_ENST00000520741_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7163 | |EntrezGene=7163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |HGNC=12005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000520741_5end | |||
|cluster_id=chr8:80992779..80992802,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_12_at_TPD52_5end | |||
|id=chr8:80992779..80992802,- | |||
|ontology_enrichment_celltype=CL:0000242!3.01e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.03e-19;2!CL:0000242;8.03e-19;2!CL:0000312;4.53e-08;5!CL:0000095;1.34e-07;17!CL:0000240;7.36e-07;6!CL:0000311;7.36e-07;6!CL:0000079;7.36e-07;6!CL:0000237;7.36e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.18e-19,2;CL:0000312,4.78e-08,5;CL:0000095,1.38e-07,17;CL:0000123,1.38e-07,17;CL:0000240,7.69e-07,6;CL:0000311,7.69e-07,6;CL:0000079,7.69e-07,6;CL:0000237,7.69e-07,6;CL:0000036,7.69e-07,6;CL:0000357,7.69e-07,6;CL:0000114,7.69e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.37e-10;1!UBERON:0000358;4.64e-10;1!UBERON:0001045;8.99e-10;1!CL:0000357;7.36e-07;6!CL:0000114;7.36e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;8.99e-10;1!DOID:326;8.99e-10;1!DOID:3978;8.99e-10;1!DOID:3394;8.99e-10;1!DOID:5844;8.99e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.55e-10,1;DOID:326,7.55e-10,1;DOID:3978,7.55e-10,1;DOID:3394,7.55e-10,1;DOID:5844,7.55e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.24e-13!35;UBERON:0001905!1.73e-12!2;UBERON:0002757!1.73e-12!2;UBERON:0010134!1.73e-12!2;UBERON:0002784!1.73e-12!2;UBERON:0005408!1.73e-12!2;UBERON:0001899!1.73e-12!2;UBERON:0000059!3.08e-12!11;UBERON:0000160!2.72e-11!27;UBERON:0001155!5.43e-10!9;UBERON:0002110!2.31e-08!3;UBERON:0006242!2.31e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.67e-29;22!UBERON:0000160;5.83e-23;17!UBERON:0001905;3.75e-19;2!UBERON:0002757;3.75e-19;2!UBERON:0010134;3.75e-19;2!UBERON:0005408;3.75e-19;2!UBERON:0001899;3.75e-19;2!UBERON:0004921;5.85e-17;33!UBERON:0002108;2.21e-16;4!UBERON:0001155;1.11e-15;9!UBERON:0000059;7.17e-13;11!UBERON:0002110;9.10e-13;3!UBERON:0003296;4.86e-10;4!UBERON:0010133;4.86e-10;4!UBERON:0002784;4.86e-10;4!UBERON:0001154;8.99e-10;1!UBERON:0001153;8.99e-10;1!UBERON:0009854;8.99e-10;1!UBERON:0000945;6.77e-08;5!UBERON:0010039;6.77e-08;5!UBERON:0001555;3.97e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.37e-26,25;UBERON:0000160,5.64e-23,17;UBERON:0001905,3.75e-19,2;UBERON:0002757,3.75e-19,2;UBERON:0010134,3.75e-19,2;UBERON:0005408,3.75e-19,2;UBERON:0001899,3.75e-19,2;UBERON:0002108,2.59e-16,4;UBERON:0001155,9.54e-16,9;UBERON:0000059,6.33e-13,11;UBERON:0002110,1.05e-12,3;UBERON:0006242,1.05e-12,3;UBERON:0003296,4.86e-10,4;UBERON:0010133,4.86e-10,4;UBERON:0002784,4.86e-10,4;UBERON:0001154,8.99e-10,1;UBERON:0001153,8.99e-10,1;UBERON:0001045,8.99e-10,1 | |||
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|short_description=p12@TPD52 | |||
}} | }} |
Latest revision as of 04:31, 19 September 2015
Short description: | p12@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TPD52_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 45bp_to_ENST00000520741_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.18e-19 | 2 |
keratinocyte | 4.78e-08 | 5 |
neuron associated cell | 1.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.38e-07 | 17 |
stratified squamous epithelial cell | 7.69e-07 | 6 |
keratin accumulating cell | 7.69e-07 | 6 |
stratified epithelial cell | 7.69e-07 | 6 |
keratinizing barrier epithelial cell | 7.69e-07 | 6 |
epithelial fate stem cell | 7.69e-07 | 6 |
stratified epithelial stem cell | 7.69e-07 | 6 |
surface ectodermal cell | 7.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.37e-26 | 25 |
intestine | 5.64e-23 | 17 |
pineal body | 3.75e-19 | 2 |
regional part of epithalamus | 3.75e-19 | 2 |
secretory circumventricular organ | 3.75e-19 | 2 |
circumventricular organ | 3.75e-19 | 2 |
epithalamus | 3.75e-19 | 2 |
small intestine | 2.59e-16 | 4 |
colon | 9.54e-16 | 9 |
large intestine | 6.33e-13 | 11 |
gallbladder | 1.05e-12 | 3 |
gall bladder primordium | 1.05e-12 | 3 |
gland of diencephalon | 4.86e-10 | 4 |
neuroendocrine gland | 4.86e-10 | 4 |
regional part of diencephalon | 4.86e-10 | 4 |
vermiform appendix | 8.99e-10 | 1 |
caecum | 8.99e-10 | 1 |
midgut | 8.99e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.55e-10 | 1 |
ischemia | 7.55e-10 | 1 |
extrinsic cardiomyopathy | 7.55e-10 | 1 |
myocardial ischemia | 7.55e-10 | 1 |
myocardial infarction | 7.55e-10 | 1 |