FFCP PHASE1:Hg19::chr17:62084108..62084111,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3384 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5345 | |||
|TSSclassifier=strong | |||
|UniProt=P13598,Q6FHE2 | |||
|association_with_transcript=171bp_to_ENST00000449662,NM_000873,uc002jdu.3_5end | |||
|cluster_id=chr17:62084108..62084111,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_ICAM2_5end | |||
|id=chr17:62084108..62084111,- | |||
|ontology_enrichment_celltype=CL:0002139!7.57e-43!24;CL:0000115!5.02e-41!35;CL:0000071!1.52e-32!18;CL:0002546!1.52e-32!18;CL:0002078!1.70e-30!44;CL:0000213!3.01e-21!57;CL:0000215!3.01e-21!57;CL:1000413!2.10e-17!9;CL:0002544!3.59e-12!6;CL:0002543!8.47e-12!6;CL:0005020!8.78e-12!6;CL:0002138!8.78e-12!6;CL:0005022!8.78e-12!6;CL:0000222!2.00e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.84e-130;24!CL:0000115;3.70e-114;36!CL:0000071;3.58e-98;18!CL:0002078;4.74e-68;45!CL:1000413;1.04e-50;9!CL:0000213;6.09e-49;58!CL:0000215;6.09e-49;58!CL:0002544;2.22e-34;6!CL:0002543;3.19e-33;6!CL:0002138;4.11e-33;6!CL:0002188;6.75e-19;5!CL:0002144;3.74e-17;3!CL:0002618;4.18e-17;3!CL:0000076;1.28e-15;63!CL:1000746;1.53e-13;7!CL:1000612;1.53e-13;7!CL:0002545;7.89e-13;2!CL:0002262;2.29e-12;2!CL:1000398;2.29e-12;2!CL:0002681;6.24e-08;12!CL:0002584;6.24e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.06e-136,36;CL:0002139,1.74e-130,24;CL:0002078,1.26e-107,45;CL:0000071,3.90e-98,18;CL:0002546,3.90e-98,18;CL:0000213,3.15e-82,58;CL:0000215,3.15e-82,58;CL:1000413,1.07e-50,9;CL:0000222,2.18e-36,121;CL:0002544,2.22e-34,6;CL:0002543,3.19e-33,6;CL:0005020,3.57e-33,6;CL:0002138,3.57e-33,6;CL:0005022,3.57e-33,6;CL:0000076,3.02e-25,63;CL:0002188,6.60e-19,5;CL:0002144,3.95e-17,3;CL:0002618,3.95e-17,3;CL:0002321,2.31e-14,250;CL:0000066,2.78e-14,253;CL:1000746,1.51e-13,7;CL:1000612,1.51e-13,7;CL:0002545,7.44e-13,2;CL:0002262,2.49e-12,2;CL:1000398,2.49e-12,2;CL:0002681,6.18e-08,12;CL:0002584,6.18e-08,12 | |||
|ontology_enrichment_development_v019=CL:0002546;3.58e-98;18!CL:0005022;4.11e-33;6!CL:0000222;5.14e-15;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-35!115;UBERON:0001986!1.52e-32!18;UBERON:0004638!1.52e-32!18;UBERON:0004852!1.52e-32!18;UBERON:0000487!3.52e-28!22;UBERON:0006914!5.15e-24!25;UBERON:0004111!1.66e-22!241;UBERON:0000025!3.68e-20!194;UBERON:0000055!1.70e-19!69;UBERON:0000477!2.94e-19!286;UBERON:0003915!2.10e-17!9;UBERON:0004700!2.10e-17!9;UBERON:0001917!2.10e-17!9;UBERON:0004872!3.72e-17!84;UBERON:0001009!5.23e-16!113;UBERON:0002049!9.83e-16!79;UBERON:0007798!9.83e-16!79;UBERON:0004535!1.09e-14!110;UBERON:0001981!2.79e-14!60;UBERON:0007500!2.79e-14!60;UBERON:0004537!2.79e-14!60;UBERON:0006965!2.79e-14!60;UBERON:0003914!2.99e-14!118;UBERON:0000483!3.05e-11!309;UBERON:0000119!5.92e-11!312;UBERON:0001638!7.29e-10!9;UBERON:0003920!7.29e-10!9;UBERON:0004582!7.29e-10!9;UBERON:0001473!1.48e-08!8;UBERON:0004536!1.48e-08!8;UBERON:0006558!1.48e-08!8;UBERON:0002465!1.98e-08!10;UBERON:0001893!3.22e-08!34;UBERON:0001049!7.09e-08!57;UBERON:0005068!7.09e-08!57;UBERON:0006241!7.09e-08!57;UBERON:0007135!7.09e-08!57;UBERON:0003103!1.18e-07!69;UBERON:0002791!1.77e-07!33;UBERON:0002020!2.89e-07!34;UBERON:0003528!2.89e-07!34;UBERON:0003075!3.91e-07!86;UBERON:0007284!3.91e-07!86;UBERON:0001869!8.11e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.58e-98;18!UBERON:0001986;3.58e-98;18!UBERON:0004852;3.58e-98;18!UBERON:0000487;1.26e-79;22!UBERON:0006914;1.32e-69;25!UBERON:0003915;1.04e-50;9!UBERON:0004700;1.04e-50;9!UBERON:0001917;1.04e-50;9!UBERON:0000490;1.42e-47;33!UBERON:0000055;2.03e-29;65!UBERON:0001473;1.01e-24;8!UBERON:0004536;1.01e-24;8!UBERON:0006558;1.01e-24;8!UBERON:0007500;2.99e-22;56!UBERON:0001981;2.99e-22;56!UBERON:0004537;2.99e-22;56!UBERON:0001638;5.42e-22;9!UBERON:0003920;5.42e-22;9!UBERON:0004582;5.42e-22;9!UBERON:0002465;1.12e-19;10!UBERON:0002049;4.03e-19;75!UBERON:0007798;4.03e-19;75!UBERON:0003914;8.14e-18;74!UBERON:0010523;3.74e-17;3!UBERON:0001915;3.74e-17;3!UBERON:0001982;3.74e-17;3!UBERON:0000074;1.53e-13;7!UBERON:0001229;1.53e-13;7!UBERON:0000353;2.43e-13;15!UBERON:0005800;7.89e-13;2!UBERON:0001515;7.89e-13;2!UBERON:0000025;1.47e-12;93!UBERON:0001009;1.82e-12;112!UBERON:0001281;2.29e-12;2!UBERON:0003497;2.29e-12;2!UBERON:0003909;2.29e-12;2!UBERON:0003835;2.29e-12;2!UBERON:0002405;6.81e-12;27!UBERON:0004535;4.50e-11;109!UBERON:0002066;1.78e-10;5!UBERON:0004111;4.15e-10;130!UBERON:0001637;1.61e-09;42!UBERON:0003509;1.61e-09;42!UBERON:0004572;1.61e-09;42!UBERON:0000947;2.03e-09;21!UBERON:0010191;2.03e-09;21!UBERON:0001280;1.57e-08;3!UBERON:0004647;1.57e-08;3!UBERON:0002106;5.82e-08;3!UBERON:0001225;6.24e-08;12!UBERON:0008987;6.24e-08;12!UBERON:0000119;2.09e-07;139!UBERON:0000483;3.32e-07;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.90e-98,18;UBERON:0001986,3.90e-98,18;UBERON:0004852,3.90e-98,18;UBERON:0000487,1.36e-79,22;UBERON:0006914,1.40e-69,25;UBERON:0000055,8.07e-51,68;UBERON:0003915,1.07e-50,9;UBERON:0004700,1.07e-50,9;UBERON:0001917,1.07e-50,9;UBERON:0002049,1.29e-43,78;UBERON:0007798,1.29e-43,78;UBERON:0007500,4.44e-34,59;UBERON:0001981,4.44e-34,59;UBERON:0004537,4.44e-34,59;UBERON:0006965,4.44e-34,59;UBERON:0001009,9.89e-34,112;UBERON:0004535,3.39e-32,109;UBERON:0004872,7.64e-31,83;UBERON:0003914,4.56e-25,117;UBERON:0001473,9.13e-25,8;UBERON:0004536,9.13e-25,8;UBERON:0006558,9.13e-25,8;UBERON:0001638,5.42e-22,9;UBERON:0003920,5.42e-22,9;UBERON:0004582,5.42e-22,9;UBERON:0002465,1.03e-19,10;UBERON:0010523,3.95e-17,3;UBERON:0001915,3.95e-17,3;UBERON:0001982,3.95e-17,3;UBERON:0004111,1.34e-16,240;UBERON:0003887,2.24e-16,12;UBERON:0003081,1.32e-14,203;UBERON:0010532,1.51e-13,7;UBERON:0000074,1.51e-13,7;UBERON:0001229,1.51e-13,7;UBERON:0001230,1.51e-13,7;UBERON:0003220,1.51e-13,7;UBERON:0005749,1.51e-13,7;UBERON:0004199,1.51e-13,7;UBERON:0004209,1.51e-13,7;UBERON:0004198,1.51e-13,7;UBERON:0000353,2.48e-13,15;UBERON:0000025,4.13e-13,192;UBERON:0005800,7.44e-13,2;UBERON:0001515,7.44e-13,2;UBERON:0001281,2.49e-12,2;UBERON:0003497,2.49e-12,2;UBERON:0003909,2.49e-12,2;UBERON:0003835,2.49e-12,2;UBERON:0000490,2.70e-12,148;UBERON:0005103,7.22e-12,8;UBERON:0000083,7.22e-12,8;UBERON:0009201,7.22e-12,8;UBERON:0006553,7.22e-12,8;UBERON:0003074,7.22e-12,8;UBERON:0003060,7.22e-12,8;UBERON:0000080,1.47e-10,9;UBERON:0002120,1.47e-10,9;UBERON:0004875,1.47e-10,9;UBERON:0005721,1.47e-10,9;UBERON:0005754,1.47e-10,9;UBERON:0007297,1.47e-10,9;UBERON:0002066,1.72e-10,5;UBERON:0000058,2.12e-10,19;UBERON:0001637,1.16e-09,42;UBERON:0003509,1.16e-09,42;UBERON:0004572,1.16e-09,42;UBERON:0000947,2.03e-09,21;UBERON:0010191,2.03e-09,21;UBERON:0004876,1.19e-08,11;UBERON:0001280,1.66e-08,3;UBERON:0004647,1.66e-08,3;UBERON:0005171,1.66e-08,3;UBERON:0000926,2.90e-08,315;UBERON:0004120,2.90e-08,315;UBERON:0006603,2.90e-08,315;UBERON:0001225,6.18e-08,12;UBERON:0008987,6.18e-08,12;UBERON:0002106,6.26e-08,3;UBERON:0004854,6.26e-08,3;UBERON:0009034,6.26e-08,3;UBERON:0002095,6.26e-08,3;UBERON:0004782,6.26e-08,3;UBERON:0003281,6.26e-08,3;UBERON:0009664,6.26e-08,3;UBERON:0002296,6.26e-08,3;UBERON:0005602,6.26e-08,3;UBERON:0001179,6.26e-08,3;UBERON:0006293,6.26e-08,3;UBERON:0000483,4.72e-07,306;UBERON:0000119,6.22e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,10.7331699978021,10.3228151412735,15.6213225723417,9.04492707078415,24.7504667363844,12.6554299292431,7.10582886225156,9.56142008926517,12.0960529313481,7.36385348082274,10.4735622448378,4.56163263431108,4.39311703586705,16.91250169591,12.9622711661082,8.92997282840798,4.71511682514957,5.0675166217495,13.7984973719295,14.2389848935219,6.59526278149466,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,3.4228309292667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8104872739944,7.01208869017229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79578817909799,6.94478268864916,6.84914948044554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0600076106345,15.818714590716,2.37507507712353,26.2186329573492,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0.916641696046735,0.717873024576814,0.399358000997982,1.28767814440971,0,0.671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.410462603746695,0,0,0.293104467356165,0,0,0.39669780522807,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0,0.620916591138472,0,0,0.203909198930495,0.263091094251396,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0.4226557275834,0,1.31577485171795,1.03132620757723,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p5@ICAM2 | |||
}} |
Latest revision as of 19:01, 16 September 2015
Short description: | p5@ICAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ICAM2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 171bp_to_ENST00000449662, NM_000873, uc002jdu.3_5end |
EntrezGene: | ICAM2 |
HGNC: | 5345 |
UniProt: | P13598Q6FHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.06e-136 | 36 |
endothelial cell of vascular tree | 1.74e-130 | 24 |
meso-epithelial cell | 1.26e-107 | 45 |
blood vessel endothelial cell | 3.90e-98 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.90e-98 | 18 |
lining cell | 3.15e-82 | 58 |
barrier cell | 3.15e-82 | 58 |
endothelial cell of artery | 1.07e-50 | 9 |
mesodermal cell | 2.18e-36 | 121 |
aortic endothelial cell | 2.22e-34 | 6 |
vein endothelial cell | 3.19e-33 | 6 |
lymphangioblast | 3.57e-33 | 6 |
endothelial cell of lymphatic vessel | 3.57e-33 | 6 |
vascular lymphangioblast | 3.57e-33 | 6 |
squamous epithelial cell | 3.02e-25 | 63 |
glomerular endothelial cell | 6.60e-19 | 5 |
capillary endothelial cell | 3.95e-17 | 3 |
endothelial cell of umbilical vein | 3.95e-17 | 3 |
embryonic cell | 2.31e-14 | 250 |
epithelial cell | 2.78e-14 | 253 |
glomerular cell | 1.51e-13 | 7 |
kidney corpuscule cell | 1.51e-13 | 7 |
thoracic aorta endothelial cell | 7.44e-13 | 2 |
endothelial cell of sinusoid | 2.49e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-12 | 2 |
kidney cortical cell | 6.18e-08 | 12 |
renal cortical epithelial cell | 6.18e-08 | 12 |