FFCP PHASE1:Hg19::chr17:46724186..46724249,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=135bp_to_ENST00000433510_5end | |||
|cluster_id=chr17:46724186..46724249,- | |||
|description=CAGE_peak_1_at_ENST00000433510_5end | |||
|id=chr17:46724186..46724249,- | |||
|ontology_enrichment_celltype=CL:0000066!6.18e-16!254;CL:1000449!1.26e-11!16;CL:1000497!1.47e-11!18;CL:0002518!1.47e-11!18;CL:1000507!2.12e-10!12;CL:1000494!2.12e-10!12;CL:0002681!8.22e-09!13;CL:0002584!8.22e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.56e-17;17!CL:0002518;2.56e-17;17!CL:1000449;3.55e-17;15!CL:1000507;8.71e-17;10!CL:1000494;8.71e-17;10!CL:0002681;1.11e-12;12!CL:0002584;1.11e-12;12!CL:0000244;9.26e-09;4!CL:0000731;9.26e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.40e-25,253;CL:1000497,3.03e-17,17;CL:0002518,3.03e-17,17;CL:1000449,4.15e-17,15;CL:1000507,1.07e-16,10;CL:1000494,1.07e-16,10;CL:0002681,1.16e-12,12;CL:0002584,1.16e-12,12;CL:0000244,9.27e-09,4;CL:0000731,9.27e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.26e-10;29 | |||
|ontology_enrichment_disease=DOID:305!2.22e-26!106;DOID:0050687!7.55e-24!143;DOID:162!3.76e-16!235;DOID:14566!1.04e-15!239;DOID:299!1.56e-07!25;DOID:1749!4.14e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.12e-11;14!DOID:305;4.17e-09;106!DOID:299;5.25e-09;25!DOID:0050687;1.96e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.20e-33,106;DOID:0050687,3.91e-32,143;DOID:162,4.97e-24,235;DOID:14566,4.57e-23,239;DOID:1749,3.07e-11,14;DOID:299,5.50e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0006554!8.10e-16!44;UBERON:0001008!3.24e-15!45;UBERON:0000058!3.21e-14!26;UBERON:0003886!3.69e-14!63;UBERON:0002113!3.48e-13!27;UBERON:0003918!3.48e-13!27;UBERON:0005095!3.48e-13!27;UBERON:0007687!3.48e-13!27;UBERON:0000080!4.78e-13!18;UBERON:0002120!4.78e-13!18;UBERON:0004875!4.78e-13!18;UBERON:0005721!4.78e-13!18;UBERON:0005754!4.78e-13!18;UBERON:0007297!4.78e-13!18;UBERON:0003887!5.84e-13!21;UBERON:0000489!1.54e-12!32;UBERON:0006555!3.30e-12!17;UBERON:0005103!3.30e-12!17;UBERON:0000083!3.30e-12!17;UBERON:0009201!3.30e-12!17;UBERON:0004819!3.30e-12!17;UBERON:0006553!3.30e-12!17;UBERON:0003074!3.30e-12!17;UBERON:0003060!3.30e-12!17;UBERON:0004211!1.26e-11!16;UBERON:0001285!1.26e-11!16;UBERON:0007684!1.26e-11!16;UBERON:0003220!1.26e-11!16;UBERON:0004208!1.26e-11!16;UBERON:0002553!1.79e-11!70;UBERON:0002417!2.23e-11!61;UBERON:0000916!2.23e-11!61;UBERON:0004876!3.63e-11!20;UBERON:0003064!1.77e-10!37;UBERON:0009773!2.12e-10!12;UBERON:0001231!2.12e-10!12;UBERON:0004810!2.12e-10!12;UBERON:0000464!3.06e-10!104;UBERON:0001851!1.56e-09!16;UBERON:0001225!8.22e-09!13;UBERON:0008987!8.22e-09!13;UBERON:0005172!1.13e-08!55;UBERON:0005173!1.13e-08!55;UBERON:0000466!1.22e-08!126;UBERON:0001737!2.04e-08!9;UBERON:0005910!5.06e-08!6;UBERON:0009569!1.03e-07!113;UBERON:0000365!2.95e-07!5;UBERON:0005177!3.92e-07!107;UBERON:0004921!4.77e-07!129;UBERON:0004185!4.77e-07!129;UBERON:0004119!8.11e-07!169;UBERON:0000925!8.11e-07!169;UBERON:0006595!8.11e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.59e-21;30!UBERON:0001008;1.59e-21;30!UBERON:0006555;3.55e-17;15!UBERON:0004819;3.55e-17;15!UBERON:0001285;3.55e-17;15!UBERON:0007684;3.55e-17;15!UBERON:0004211;8.71e-17;10!UBERON:0009773;8.71e-17;10!UBERON:0001231;8.71e-17;10!UBERON:0004810;8.71e-17;10!UBERON:0002113;5.61e-15;24!UBERON:0011143;5.61e-15;24!UBERON:0001851;4.77e-14;15!UBERON:0000489;1.93e-13;29!UBERON:0001225;1.11e-12;12!UBERON:0008987;1.11e-12;12!UBERON:0001737;2.57e-12;9!UBERON:0001557;2.57e-12;9!UBERON:0005910;1.14e-11;6!UBERON:0000365;1.74e-10;5!UBERON:0005409;4.40e-10;22!UBERON:0000353;1.20e-09;15!UBERON:0000072;4.96e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.15e-17,15;UBERON:0009773,4.15e-17,15;UBERON:0001231,4.15e-17,15;UBERON:0001285,4.15e-17,15;UBERON:0007684,4.15e-17,15;UBERON:0004208,4.15e-17,15;UBERON:0004810,1.07e-16,10;UBERON:0006555,8.35e-16,16;UBERON:0004819,8.35e-16,16;UBERON:0002113,2.76e-15,26;UBERON:0003918,2.76e-15,26;UBERON:0011143,2.76e-15,26;UBERON:0005095,2.76e-15,26;UBERON:0007687,2.76e-15,26;UBERON:0006554,3.58e-15,47;UBERON:0001008,1.05e-14,48;UBERON:0001851,5.02e-14,15;UBERON:0000489,7.66e-14,31;UBERON:0001225,1.16e-12,12;UBERON:0008987,1.16e-12,12;UBERON:0002417,2.57e-12,60;UBERON:0000916,2.57e-12,60;UBERON:0001737,2.67e-12,9;UBERON:0005910,1.10e-11,6;UBERON:0004119,8.29e-11,160;UBERON:0000925,8.29e-11,160;UBERON:0006595,8.29e-11,160;UBERON:0000365,1.72e-10,5;UBERON:0005172,3.40e-10,54;UBERON:0005173,3.40e-10,54;UBERON:0005409,8.35e-10,25;UBERON:0004921,8.98e-10,118;UBERON:0005177,1.20e-09,101;UBERON:0000353,1.23e-09,15;UBERON:0001007,3.62e-09,145;UBERON:0001555,3.62e-09,145;UBERON:0007026,3.62e-09,145;UBERON:0009569,3.90e-08,112;UBERON:0008947,8.54e-08,38;UBERON:0003258,8.54e-08,38;UBERON:0001557,2.05e-07,19;UBERON:0000072,3.25e-07,47;UBERON:0000058,7.45e-07,19 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,2.23480547213644,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.14940825229924,0.472264687882075,0,0,0.154816123316076,0,1.50602959389125,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,0.80642697289893,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.412210116953756,0.257640540045629,0.744467425326359,5.06328996723799,4.96928726322113,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,4.49565840151407,4.55178663210875,3.37415441836875,4.52205288202815,5.01122721412534,3.55905928666645,3.10112008768378,2.74710051175484,3.8474715694639,0,0,0,0,0,0,0,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,4.37132061574756,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.533637789017222,0,0,0,0,0.61384789315225,0.841980283299221,0.768834895534206,2.55853624533352,2.2519548960105,0,0,0,0.246381468041427,0,0,3.50492403815704,2.20557117333613,0.828728900423067,0,0,0,13.0847887743149,9.01079444121653,14.1182958451834,13.1525302187935,6.22754610467967,2.27466768141793,0.680374821106063,6.90930931526846,4.62681758070868,6.50271450105247,9.53210570324221,8.15604073744123,7.47968408035852,12.3131115097198,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,4.02770547529675,2.53526042279017,0.286822704408103,0.687743287091848,0.35667105148125,0,0,0,0,0,0,0,0,0.564862804660675,34.0099244410272,23.5860065934676,34.144121822324,19.7562124177985,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,6.37104561550682,0,0,0,0,0,0,0,0,0,0,0,10.0253790836027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5912107983727,0,3.27673408723686,0,13.3543988999014,0,0,0,0,0,0,0,0,0,8.01223355040328,0.503865495708552,0,0,0,5.21236436654496,0.537063524026827,0,0.690503839458535,0,0,0,0,0,0,0,0,11.4931382768355,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,6.55291598109435,0.230850775511391,0,0,0,0,0,0.366390373607449,0,0,0,0,1.80476528493745,4.90156335794349,2.85296697858933,0,0,14.1368703233778,0,0.706765357169704,0,33.8389056566692,6.72277490225378,18.9419344929424,1.18608451472249,0.494255755786011,0.417687798021821,0,0,0,0,0,2.42780379534093,1.97292201424695,0,0,0,10.672962778429,8.08767892898528,0.664653872707185,0,0,0,0.284609546029793,14.976864685419,0,14.2088976250848,8.53180224487945,0.873633341210151,12.554980370428,1.25783230675811,1.90032224424082,1.31384731285135,0.0969890164884194,0,0,10.8263120470933,0,0,5.86654148204409,1.60317640503067,0.213452994739353,3.79638258206047,11.0949621208662,6.07043959679353,0,0,7.45515213392595,7.77790314235425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44496185301621,0,0,0,0.160753148465019,0,0,0,0,0,0,0.551639951094387,0.524545881349981,1.79520572082991,5.55790751931819,14.9693853909167,0,0,0,0,0,0,13.1703210718736,0,0,0,0,0,0,0,5.30369197441421,0,0.213574825135389,0,0,0,12.4495328095705,2.31405936923702,12.7668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,14.1159491818903,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,0,0.813741466409323,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,10.786710502809,0,0,0,4.39892701215285,0.734210113519403,0,0,0,1.76689145945881,0,0.168942440653073,6.40603796469867,2.76344273384959,0,0,0.194860308839388,0,0,7.20741667462108,7.86473308011902,12.467415278159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0.80057074828547,0,0,0,0,0,0,0,0,0,0,13.6425328716426,0,11.0057159113007,3.00366731990879,0,6.90359926060101,0,0,0.40341013740704,0,0,1.14640342257068,25.5791029155488,0,0,0,0.0634158101939068,0,0,0,2.63806866539431,2.42748612515231,0,0,0,0,0,4.83982747734273,0.171488009437418,0,0,0,0,0.078493092850514,0,7.28707624615851,13.6973808076424,0,10.0327854456281,0,0,8.25314120113689,6.95433089210318,0,0,0,0,0,0,0.340853619036631,6.35080575286394,0.22910686854405,5.58371494195776,10.5109283287518,0,12.2687792019054,0,0,0,0,0,11.6969731731053,0.198950775161368,0,13.4405837626362,0,6.49140227336696,2.39239890134628,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,1.79894080664872,8.21348117586025,0,0,0,0,0,1.89325874631822,0,0,0,0,0,0,0,0,3.92765353135455,0.101988829741982,0,1.10273879441814,0.250707539292375,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,15.7922341105291,4.69600321861948,0,15.5397599644395,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000433510 | |||
}} |
Latest revision as of 18:13, 25 July 2015
Short description: | p1@ENST00000433510 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000433510_5end |
Coexpression cluster: | NA |
Association with transcript: | 135bp_to_ENST00000433510_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.40e-25 | 253 |
kidney cell | 3.03e-17 | 17 |
kidney epithelial cell | 3.03e-17 | 17 |
epithelial cell of nephron | 4.15e-17 | 15 |
kidney tubule cell | 1.07e-16 | 10 |
nephron tubule epithelial cell | 1.07e-16 | 10 |
kidney cortical cell | 1.16e-12 | 12 |
renal cortical epithelial cell | 1.16e-12 | 12 |
transitional epithelial cell | 9.27e-09 | 4 |
urothelial cell | 9.27e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.20e-33 | 106 |
cell type cancer | 3.91e-32 | 143 |
cancer | 4.97e-24 | 235 |
disease of cellular proliferation | 4.57e-23 | 239 |
squamous cell carcinoma | 3.07e-11 | 14 |
adenocarcinoma | 5.50e-09 | 25 |