FFCP PHASE1:Hg19::chr17:38501500..38501517,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5914 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9864 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000475125_5end | |||
|cluster_id=chr17:38501500..38501517,+ | |||
|description=CAGE_peak_13_at_RARA_5end | |||
|id=chr17:38501500..38501517,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;2.82e-14;7!CL:1000612;2.82e-14;7!CL:0000623;1.29e-12;3!CL:0000650;1.09e-08;2!CL:1000500;1.09e-08;2!CL:1000618;1.09e-08;2!CL:1001318;1.09e-08;2!CL:0002173;1.09e-08;2!CL:0002681;3.42e-08;12!CL:0002584;3.42e-08;12!CL:0002188;4.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,6.12e-14,7;CL:1000612,6.12e-14,7;CL:0000623,3.64e-13,3;CL:0000825,3.64e-13,3;CL:0000650,1.68e-08,2;CL:1000500,1.68e-08,2;CL:1000618,1.68e-08,2;CL:1001318,1.68e-08,2;CL:0002173,1.68e-08,2;CL:0002681,5.27e-08,12;CL:0002584,5.27e-08,12;CL:0002188,7.10e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!1.36e-08!61;UBERON:0000916!1.36e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.82e-14;7!UBERON:0001229;2.82e-14;7!UBERON:0003688;1.74e-10;6!UBERON:0002358;1.74e-10;6!UBERON:0003684;1.74e-10;6!UBERON:0001178;1.74e-10;6!UBERON:0000353;4.90e-09;15!UBERON:0003567;1.09e-08;2!UBERON:0003838;1.09e-08;2!UBERON:0003586;1.09e-08;2!UBERON:0005169;1.09e-08;2!UBERON:0002321;1.09e-08;2!UBERON:0005215;1.09e-08;2!UBERON:0002303;1.09e-08;2!UBERON:0002319;1.09e-08;2!UBERON:0001225;3.42e-08;12!UBERON:0008987;3.42e-08;12!UBERON:0004457;5.24e-07;9!UBERON:0000042;5.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,6.12e-14,7;UBERON:0000074,6.12e-14,7;UBERON:0001229,6.12e-14,7;UBERON:0001230,6.12e-14,7;UBERON:0003220,6.12e-14,7;UBERON:0005749,6.12e-14,7;UBERON:0004199,6.12e-14,7;UBERON:0004209,6.12e-14,7;UBERON:0004198,6.12e-14,7;UBERON:0005103,3.67e-12,8;UBERON:0000083,3.67e-12,8;UBERON:0009201,3.67e-12,8;UBERON:0006553,3.67e-12,8;UBERON:0003074,3.67e-12,8;UBERON:0003060,3.67e-12,8;UBERON:0000080,8.90e-11,9;UBERON:0002120,8.90e-11,9;UBERON:0004875,8.90e-11,9;UBERON:0005721,8.90e-11,9;UBERON:0005754,8.90e-11,9;UBERON:0007297,8.90e-11,9;UBERON:0003688,2.91e-10,6;UBERON:0002358,2.91e-10,6;UBERON:0003684,2.91e-10,6;UBERON:0001178,2.91e-10,6;UBERON:0000058,3.20e-09,19;UBERON:0000353,7.18e-09,15;UBERON:0004876,9.23e-09,11;UBERON:0003567,1.68e-08,2;UBERON:0003838,1.68e-08,2;UBERON:0003586,1.68e-08,2;UBERON:0005169,1.68e-08,2;UBERON:0002321,1.68e-08,2;UBERON:0005215,1.68e-08,2;UBERON:0002303,1.68e-08,2;UBERON:0002319,1.68e-08,2;UBERON:0002417,4.52e-08,60;UBERON:0000916,4.52e-08,60;UBERON:0001225,5.27e-08,12;UBERON:0008987,5.27e-08,12;UBERON:0003887,5.27e-08,12 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.986680828671798,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0,0.245733936501509,2.09340350391728,0.218441372130172,0,0,0,0,1.20538905604795,1.46062018077475,0.487932798790507,0.123121058076788,0.612002073732759,0,0.572471974262113,0,0.251085279189606,0.0764134057479513,0,0.0787107813136792,1.96682138424452,0.383829398097213,0.77408061658038,0.919421224478927,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81446068902259,0.267440195783507,0.724122019413995,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.790513071238134,0.327447688744282,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.825354125820202,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,2.22000793575444,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.487185025805993,0,0.368199594569197,0.161646056818812,0,0.201504196455281,0.508681776931463,0,0,0.286804595389004,0,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,0,0.591534000199219,0,0.723033089650446,0.110293972732394,0.217879444092406,0.237270619111097,0.539325232640658,0.392442930250692,0,1.4763109092493,0,1.2347220339942,1.47008711385542,0,0,0,0,1.72183813960359,0,0,1.1240175325762,0,0,0,0,1.44331342025273,0.34779121492523,0.70445216541493,0,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.190493682876507,0,1.17217447210047,0,0.719792448923265,0.901029173531752,0.857479297891735,0.224262168690721,0.87192013766656,0.22001485746285,0.646358578788889,0,0,1.06375246633948,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0.710783897485092,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,1.77327684181734,1.72502059887614,2.95188983443421,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.413536052245775,0,0.74709290462411,0.606255142892519,1.66435439510497,0.907170879989041,1.48864684691266,1.84154367945675,0.561320188866147,0.640695746278505,1.53512174720011,1.28683136914886,0,0,0,0,0,0,1.81289174387433,0.40101294060657,0.184161977871793,0.459257792658427,0.182091168006717,0.393373244878272,0,0.385076685522074,0,0,0.422206515571503,1.13733384070897,0.170093705276516,0.647747748306418,3.08454505380579,1.62567862526312,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.984043937099117,1.62689197332152,0.412164046590889,0,0,0,0.650060246036521,0,0.386682873168488,0,0,0,0,0,0.170453254832202,1.69160867728801,0,0.384380134730212,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0.55597265731176,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.573645408816206,0.88424136911809,0,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,0,0,0,0,0,0.199579371432817,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0.222617410045812,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0,1.61763032065188,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0.544692317594951,0,0.307801034015188,0.227884111694002,0.922255617552241,0.359030577639089,0.217294743844016,1.27600463892768,0.641183153813036,0,0,0,0.332423363800313,0,0.19606253431774,0.167821586975843,0,0.158936578980379,0.421996129056054,0,2.12029607150911,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0.0967563312890851,0.146178634172371,0,0.193978032976839,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0.160317640503067,0.213452994739353,0.599428828746391,0,0.114536596165916,0,0.432164393964449,0.248505071130865,0,0.271808412147228,0.732219924186332,0.305994652908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| |||
|short_description=p13@RARA | |||
}} |
Latest revision as of 01:19, 20 September 2015
Short description: | p13@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RARA_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000475125_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 6.12e-14 | 7 |
kidney corpuscule cell | 6.12e-14 | 7 |
natural killer cell | 3.64e-13 | 3 |
pro-NK cell | 3.64e-13 | 3 |
mesangial cell | 1.68e-08 | 2 |
kidney interstitial cell | 1.68e-08 | 2 |
juxtaglomerular complex cell | 1.68e-08 | 2 |
renal interstitial pericyte | 1.68e-08 | 2 |
extraglomerular mesangial cell | 1.68e-08 | 2 |
kidney cortical cell | 5.27e-08 | 12 |
renal cortical epithelial cell | 5.27e-08 | 12 |
glomerular endothelial cell | 7.10e-08 | 5 |