FFCP PHASE1:Hg19::chr16:19897455..19897471,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:19897455..19897471,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr16:19897455..19897471,- | |||
|id=chr16:19897455..19897471,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;5.15e-21;2!CL:0002595;3.10e-09;5!CL:0002188;3.10e-09;5!CL:0000138;5.54e-08;6!CL:1000746;5.86e-07;7!CL:1000612;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.81e-21,2;CL:0002595,2.74e-09,5;CL:0002188,2.97e-09,5;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6;CL:1000746,5.70e-07,7;CL:1000612,5.70e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-42!57;UBERON:0005068!1.71e-42!57;UBERON:0006241!1.71e-42!57;UBERON:0007135!1.71e-42!57;UBERON:0007023!1.68e-39!115;UBERON:0002616!5.07e-38!59;UBERON:0002780!2.08e-37!41;UBERON:0001890!2.08e-37!41;UBERON:0006240!2.08e-37!41;UBERON:0003080!2.34e-36!42;UBERON:0000955!1.75e-35!69;UBERON:0006238!1.75e-35!69;UBERON:0001017!2.37e-32!82;UBERON:0005743!2.06e-30!86;UBERON:0002020!7.25e-29!34;UBERON:0003528!7.25e-29!34;UBERON:0001893!7.59e-29!34;UBERON:0003075!8.23e-29!86;UBERON:0007284!8.23e-29!86;UBERON:0000073!1.41e-28!94;UBERON:0001016!1.41e-28!94;UBERON:0002346!4.16e-27!90;UBERON:0002791!4.58e-27!33;UBERON:0001869!9.01e-25!32;UBERON:0003056!6.83e-23!61;UBERON:0000025!1.98e-20!194;UBERON:0002308!8.62e-19!9;UBERON:0000125!8.62e-19!9;UBERON:0000033!1.34e-18!123;UBERON:0004111!1.14e-17!241;UBERON:0000153!2.67e-17!129;UBERON:0007811!2.67e-17!129;UBERON:0000477!4.59e-16!286;UBERON:0000956!1.69e-14!25;UBERON:0000203!1.69e-14!25;UBERON:0002619!2.35e-14!22;UBERON:0009663!3.82e-14!7;UBERON:0004121!1.06e-13!169;UBERON:0001950!2.11e-13!20;UBERON:0000924!3.70e-13!173;UBERON:0006601!3.70e-13!173;UBERON:0000483!7.66e-13!309;UBERON:0000119!1.37e-12!312;UBERON:0002298!1.97e-11!8;UBERON:0002420!8.18e-11!9;UBERON:0007245!8.18e-11!9;UBERON:0010009!8.18e-11!9;UBERON:0010011!8.18e-11!9;UBERON:0000454!8.18e-11!9;UBERON:0001894!3.56e-10!7;UBERON:0006222!3.56e-10!7;UBERON:0004732!2.81e-09!13;UBERON:0006331!8.38e-09!3;UBERON:0000988!1.53e-08!3;UBERON:0003076!9.25e-08!15;UBERON:0003057!9.25e-08!15;UBERON:0004733!2.20e-07!12;UBERON:0002028!2.20e-07!12;UBERON:0007277!2.20e-07!12;UBERON:0000475!3.20e-07!365;UBERON:0000200!4.67e-07!6;UBERON:0005162!4.89e-07!2;UBERON:0000122!4.89e-07!2;UBERON:0001897!6.49e-07!2;UBERON:0001875!6.49e-07!2;UBERON:0006514!6.49e-07!2;UBERON:0000369!7.77e-07!4;UBERON:0002435!7.77e-07!4;UBERON:0000204!7.77e-07!4;UBERON:0010082!7.77e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0001875;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0002456;5.15e-21;2!UBERON:0006514;5.15e-21;2!UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0003834;3.10e-09;5!UBERON:0001533;3.10e-09;5!UBERON:0009663;5.86e-07;7!UBERON:0003513;5.86e-07;7!UBERON:0000074;5.86e-07;7!UBERON:0001229;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0002456,3.81e-21,2;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001875,6.96e-21,2;UBERON:0006514,6.96e-21,2;UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0001781,3.42e-11,4;UBERON:0003834,2.74e-09,5;UBERON:0001533,2.74e-09,5;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0003513,5.38e-07,7;UBERON:0010532,5.70e-07,7;UBERON:0000074,5.70e-07,7;UBERON:0001229,5.70e-07,7;UBERON:0001230,5.70e-07,7;UBERON:0003220,5.70e-07,7;UBERON:0005749,5.70e-07,7;UBERON:0004199,5.70e-07,7;UBERON:0004209,5.70e-07,7;UBERON:0004198,5.70e-07,7;UBERON:0009663,6.39e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,1.94970791705028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,6.44269724847952,0,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.478901577171454,0.205116364240755,0,0.553258019713743,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.203909198930495,0.394636641377094,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,0.620597975171371,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr16:19897455..19897471,- | |||
}} |
Latest revision as of 06:54, 25 July 2015
Short description: | p@chr16:19897455..19897471, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:19897455..19897471, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.81e-21 | 2 |
smooth muscle cell of the subclavian artery | 2.74e-09 | 5 |
glomerular endothelial cell | 2.97e-09 | 5 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
glomerular cell | 5.70e-07 | 7 |
kidney corpuscule cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
internal thoracic artery | 3.81e-21 | 2 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
globus pallidus | 6.96e-21 | 2 |
pallidum | 6.96e-21 | 2 |
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
layer of retina | 3.42e-11 | 4 |
thoracic segment blood vessel | 2.74e-09 | 5 |
subclavian artery | 2.74e-09 | 5 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
trunk blood vessel | 5.38e-07 | 7 |
primitive nephron | 5.70e-07 | 7 |
renal glomerulus | 5.70e-07 | 7 |
renal corpuscle | 5.70e-07 | 7 |
glomerular capsule | 5.70e-07 | 7 |
metanephric mesenchyme | 5.70e-07 | 7 |
glomerular tuft | 5.70e-07 | 7 |
S-shaped body | 5.70e-07 | 7 |
renal vesicle | 5.70e-07 | 7 |
comma-shaped body | 5.70e-07 | 7 |
telencephalic nucleus | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |