FFCP PHASE1:Hg19::chr15:33602959..33602980,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6263 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10485 | |||
|TSSclassifier=strong | |||
|UniProt=C9K0H7 | |||
|association_with_transcript=-182bp_to_ENST00000415757_5end | |||
|cluster_id=chr15:33602959..33602980,+ | |||
|coexpression_cluster_id=C2332 | |||
|description=CAGE_peak_4_at_RYR3_5end | |||
|id=chr15:33602959..33602980,+ | |||
|ontology_enrichment_celltype=CL:0002274!6.07e-07!5;CL:0000457!6.07e-07!5;CL:0002191!6.07e-07!5;CL:0000097!6.07e-07!5;CL:0000831!6.07e-07!5;CL:0002028!6.07e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.26e-08,5;CL:0002028,4.26e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.68e-19;82!UBERON:0010122;1.85e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.21e-73!57;UBERON:0005068!3.21e-73!57;UBERON:0006241!3.21e-73!57;UBERON:0007135!3.21e-73!57;UBERON:0001017!1.73e-65!82;UBERON:0005743!6.17e-64!86;UBERON:0007023!1.05e-62!115;UBERON:0002616!7.30e-61!59;UBERON:0000073!1.84e-60!94;UBERON:0001016!1.84e-60!94;UBERON:0002780!1.42e-54!41;UBERON:0001890!1.42e-54!41;UBERON:0006240!1.42e-54!41;UBERON:0000955!5.67e-54!69;UBERON:0006238!5.67e-54!69;UBERON:0003080!5.20e-53!42;UBERON:0003075!4.55e-51!86;UBERON:0007284!4.55e-51!86;UBERON:0002346!4.62e-48!90;UBERON:0002020!2.07e-46!34;UBERON:0003528!2.07e-46!34;UBERON:0001893!5.72e-46!34;UBERON:0002791!2.73e-44!33;UBERON:0001869!1.35e-42!32;UBERON:0003056!8.30e-37!61;UBERON:0002619!2.64e-32!22;UBERON:0000153!6.14e-32!129;UBERON:0007811!6.14e-32!129;UBERON:0000956!2.37e-30!25;UBERON:0000203!2.37e-30!25;UBERON:0000033!2.91e-30!123;UBERON:0004121!3.82e-29!169;UBERON:0001950!9.25e-29!20;UBERON:0000924!4.73e-28!173;UBERON:0006601!4.73e-28!173;UBERON:0003076!2.22e-20!15;UBERON:0003057!2.22e-20!15;UBERON:0002308!7.76e-18!9;UBERON:0000125!7.76e-18!9;UBERON:0002420!1.08e-17!9;UBERON:0007245!1.08e-17!9;UBERON:0010009!1.08e-17!9;UBERON:0010011!1.08e-17!9;UBERON:0000454!1.08e-17!9;UBERON:0004733!2.24e-15!12;UBERON:0002028!2.24e-15!12;UBERON:0007277!2.24e-15!12;UBERON:0009663!4.43e-14!7;UBERON:0004732!5.45e-14!13;UBERON:0002298!1.75e-12!8;UBERON:0000025!9.14e-12!194;UBERON:0000200!1.91e-11!6;UBERON:0000349!1.40e-10!5;UBERON:0002680!4.54e-10!9;UBERON:0001895!4.54e-10!9;UBERON:0010092!4.54e-10!9;UBERON:0001894!8.44e-10!7;UBERON:0006222!8.44e-10!7;UBERON:0004111!1.61e-09!241;UBERON:0002021!1.84e-09!5;UBERON:0001872!2.13e-09!5;UBERON:0000064!2.28e-09!219;UBERON:0001871!1.05e-08!7;UBERON:0000369!1.30e-08!4;UBERON:0002435!1.30e-08!4;UBERON:0000204!1.30e-08!4;UBERON:0010082!1.30e-08!4;UBERON:0000477!9.93e-08!286;UBERON:0000475!1.24e-07!365;UBERON:0000483!2.05e-07!309;UBERON:0001896!2.49e-07!3;UBERON:0005290!2.49e-07!3;UBERON:0010096!2.49e-07!3;UBERON:0000119!3.32e-07!312;UBERON:0006331!4.01e-07!3;UBERON:0000988!4.09e-07!3;UBERON:0005383!7.06e-07!3;UBERON:0005382!7.06e-07!3;UBERON:0002240!8.89e-07!3;UBERON:0002771!9.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.90e-47;34!UBERON:0002020;4.90e-47;34!UBERON:0001893;7.46e-47;34!UBERON:0002780;1.33e-45;41!UBERON:0001890;1.33e-45;41!UBERON:0000073;1.95e-45;53!UBERON:0002616;1.95e-45;53!UBERON:0002791;6.73e-44;32!UBERON:0001869;8.23e-43;32!UBERON:0000125;1.03e-33;9!UBERON:0002308;1.03e-33;9!UBERON:0002420;3.00e-33;9!UBERON:0007245;3.00e-33;9!UBERON:0010009;3.00e-33;9!UBERON:0010011;3.00e-33;9!UBERON:0000454;3.00e-33;9!UBERON:0002619;5.50e-33;22!UBERON:0000956;9.17e-29;25!UBERON:0000203;9.17e-29;25!UBERON:0000955;5.48e-28;68!UBERON:0001017;4.96e-27;75!UBERON:0001950;5.47e-27;20!UBERON:0009663;3.11e-26;7!UBERON:0002298;8.21e-24;6!UBERON:0001016;2.06e-23;83!UBERON:0004733;2.91e-20;12!UBERON:0002028;2.91e-20;12!UBERON:0000349;3.57e-19;5!UBERON:0004732;1.36e-18;13!UBERON:0002784;7.09e-16;4!UBERON:0000369;2.57e-15;4!UBERON:0002435;2.57e-15;4!UBERON:0000204;2.57e-15;4!UBERON:0007023;1.58e-13;114!UBERON:0001896;6.23e-13;3!UBERON:0005290;6.23e-13;3!UBERON:0000988;1.24e-12;3!UBERON:0005383;6.77e-12;3!UBERON:0005382;6.77e-12;3!UBERON:0002680;6.39e-11;9!UBERON:0001895;6.39e-11;9!UBERON:0011216;2.99e-10;132!UBERON:0000200;3.55e-10;6!UBERON:0001905;2.60e-09;2!UBERON:0002757;2.60e-09;2!UBERON:0010134;2.60e-09;2!UBERON:0005408;2.60e-09;2!UBERON:0001899;2.60e-09;2!UBERON:0001875;2.99e-09;2!UBERON:0006514;2.99e-09;2!UBERON:0002148;3.30e-09;2!UBERON:0006331;3.30e-09;2!UBERON:0009662;3.30e-09;2!UBERON:0001894;4.30e-09;7!UBERON:0001871;7.04e-09;6!UBERON:0001876;9.88e-09;2!UBERON:0001954;9.88e-09;2!UBERON:0003022;9.88e-09;2!UBERON:0002421;9.88e-09;2!UBERON:0002600;9.88e-09;2!UBERON:0001873;1.85e-08;2!UBERON:0001897;2.75e-08;2!UBERON:0010225;2.75e-08;2!UBERON:0001872;4.73e-07;5!UBERON:0002021;4.73e-07;5!UBERON:0010314;7.33e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.19e-88,56;UBERON:0005068,2.19e-88,56;UBERON:0006241,2.19e-88,56;UBERON:0007135,2.19e-88,56;UBERON:0000073,2.23e-83,53;UBERON:0002616,2.23e-83,53;UBERON:0001017,1.74e-71,81;UBERON:0000955,8.26e-70,68;UBERON:0006238,8.26e-70,68;UBERON:0001016,9.20e-67,89;UBERON:0002780,1.89e-63,41;UBERON:0001890,1.89e-63,41;UBERON:0003080,1.89e-63,41;UBERON:0006240,1.89e-63,41;UBERON:0003075,7.43e-58,82;UBERON:0007284,7.43e-58,82;UBERON:0003528,2.37e-56,34;UBERON:0002020,2.37e-56,34;UBERON:0001893,1.16e-55,34;UBERON:0002346,8.89e-55,86;UBERON:0002791,1.09e-49,32;UBERON:0001869,1.29e-49,32;UBERON:0007023,6.94e-47,114;UBERON:0010371,7.90e-44,104;UBERON:0003056,1.11e-40,61;UBERON:0010314,9.92e-35,132;UBERON:0000125,9.62e-34,9;UBERON:0002308,9.62e-34,9;UBERON:0002420,1.84e-33,9;UBERON:0007245,1.84e-33,9;UBERON:0010009,1.84e-33,9;UBERON:0010011,1.84e-33,9;UBERON:0000454,1.84e-33,9;UBERON:0002619,7.19e-33,22;UBERON:0004121,1.04e-30,171;UBERON:0000924,1.04e-30,171;UBERON:0006601,1.04e-30,171;UBERON:0000956,1.16e-28,25;UBERON:0000203,1.16e-28,25;UBERON:0001950,7.43e-27,20;UBERON:0009663,2.73e-26,7;UBERON:0011216,2.54e-25,223;UBERON:0003076,9.03e-25,15;UBERON:0003057,9.03e-25,15;UBERON:0002298,9.82e-24,6;UBERON:0004733,3.49e-20,12;UBERON:0002028,3.49e-20,12;UBERON:0007277,3.49e-20,12;UBERON:0000025,1.01e-19,192;UBERON:0000349,2.31e-19,5;UBERON:0004732,1.60e-18,13;UBERON:0002784,5.65e-16,4;UBERON:0000369,1.77e-15,4;UBERON:0002435,1.77e-15,4;UBERON:0000204,1.77e-15,4;UBERON:0010082,1.77e-15,4;UBERON:0004111,4.96e-15,240;UBERON:0001896,5.89e-13,3;UBERON:0005290,5.89e-13,3;UBERON:0010096,5.89e-13,3;UBERON:0000988,1.56e-12,3;UBERON:0005383,4.56e-12,3;UBERON:0005382,4.56e-12,3;UBERON:0002680,7.63e-11,9;UBERON:0001895,7.63e-11,9;UBERON:0010092,7.63e-11,9;UBERON:0000483,1.11e-10,306;UBERON:0000119,1.72e-10,309;UBERON:0000200,3.92e-10,6;UBERON:0001905,2.45e-09,2;UBERON:0002757,2.45e-09,2;UBERON:0010134,2.45e-09,2;UBERON:0005408,2.45e-09,2;UBERON:0001899,2.45e-09,2;UBERON:0001875,3.38e-09,2;UBERON:0006514,3.38e-09,2;UBERON:0002148,3.51e-09,2;UBERON:0006331,3.51e-09,2;UBERON:0009662,3.51e-09,2;UBERON:0001894,3.79e-09,7;UBERON:0006222,3.79e-09,7;UBERON:0001871,6.28e-09,6;UBERON:0001876,6.85e-09,2;UBERON:0001954,8.98e-09,2;UBERON:0003022,8.98e-09,2;UBERON:0002421,8.98e-09,2;UBERON:0002600,8.98e-09,2;UBERON:0001873,1.54e-08,2;UBERON:0010122,1.54e-08,2;UBERON:0001897,2.33e-08,2;UBERON:0010225,2.33e-08,2;UBERON:0001872,4.99e-07,5;UBERON:0002021,5.33e-07,5;UBERON:0000923,5.70e-07,560;UBERON:0010316,5.70e-07,560;UBERON:0005291,5.70e-07,560;UBERON:0006598,5.70e-07,560;UBERON:0010317,5.70e-07,560;UBERON:0002532,5.70e-07,560;UBERON:0002050,7.62e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,8.08579650609011,7.49423757768199,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,4.22961015263549,0,0.293016358543788,0,0,0,0,0,0,3.97659059106519,2.95405774462077,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,1.20598527610407,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,3.37670028151142,4.5774520895125,3.09621927807429,0.591095237907095,0.87754158861589,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,1.82832850090172,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0,0,1.48282492557489,0,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,2.02594547058812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,4.10716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.94989877723569,0,0.137539436597234,0,0,0,2.18698403968889,0,0.0788057072991982,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0,0,5.17131825446202,4.49590845925146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,3.254964198369,6.30750115259078,5.76831067991632,3.60159137060024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.24802287837608,1.41696576325585,2.23487402680012,0.82046545696302,0.756215088665154,1.24483054435592,2.09918339321406,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,1.82351478469666,0.781078098613847,2.68692835451539,1.39514782426595,0.546974809018219,0,0,0,0,10.7140367175657,4.70797211106354,0,0.455324382702595,0,0,0,2.10706172228178,1.18390992413128,0,0,0.078493092850514,2.82808061848803,0,1.82631744101899,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,0.307988420568741,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,4.90771167787363,2.67341760294377,0.8453114551668,0,0,0.257831551894309,0,0,0,0,0,0,2.15009374727177,0,1.29183831362738,0,0,0,0,0,0,0.109265571963696,0,0,0,0.18378979906969,0.250707539292375,0.303114792872958,0,1.65833887891756,2.48239190068549,0.213233981900981,0,0.129177819672012,0.372448285775147,0,0,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.488965776731466,0,1.33151354837103,0,0 | |||
|short_description=p4@RYR3 | |||
}} |
Latest revision as of 05:54, 17 September 2015
Short description: | p4@RYR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RYR3_5end |
Coexpression cluster: | C2332_pineal_Mast_medulla_acute_locus_caudate_hippocampus |
Association with transcript: | -182bp_to_ENST00000415757_5end |
EntrezGene: | RYR3 |
HGNC: | 10485 |
UniProt: | C9K0H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.26e-08 | 5 |
basophil mast progenitor cell | 4.26e-08 | 5 |