FFCP PHASE1:Hg19::chr4:155548101..155548148,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:155548101..155548148,+
|short_description=p2@LRAT
|description=CAGE_peak_2_at_LRAT_5end
|association_with_transcript=0bp_to_ENST00000502525_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9227 | |EntrezGene=9227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6685 | |HGNC=6685 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC94 | |UniProt=D6RC94 | ||
|association_with_transcript=0bp_to_ENST00000502525_5end | |||
|cluster_id=chr4:155548101..155548148,+ | |||
|description=CAGE_peak_2_at_LRAT_5end | |||
|id=chr4:155548101..155548148,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.48e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.77e-12,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-26!115;UBERON:0001049!3.08e-24!57;UBERON:0005068!3.08e-24!57;UBERON:0006241!3.08e-24!57;UBERON:0007135!3.08e-24!57;UBERON:0002616!6.03e-21!59;UBERON:0005743!3.43e-20!86;UBERON:0003080!7.85e-20!42;UBERON:0003075!1.75e-19!86;UBERON:0007284!1.75e-19!86;UBERON:0002780!3.37e-19!41;UBERON:0001890!3.37e-19!41;UBERON:0006240!3.37e-19!41;UBERON:0001017!6.89e-19!82;UBERON:0002346!9.55e-18!90;UBERON:0000073!1.96e-17!94;UBERON:0001016!1.96e-17!94;UBERON:0000955!4.37e-16!69;UBERON:0006238!4.37e-16!69;UBERON:0003056!5.06e-16!61;UBERON:0002020!1.05e-15!34;UBERON:0003528!1.05e-15!34;UBERON:0001893!2.07e-15!34;UBERON:0002791!7.56e-15!33;UBERON:0001869!1.18e-13!32;UBERON:0000153!3.46e-12!129;UBERON:0007811!3.46e-12!129;UBERON:0000033!7.51e-12!123;UBERON:0004121!5.16e-11!169;UBERON:0000924!2.88e-10!173;UBERON:0006601!2.88e-10!173;UBERON:0000956!2.02e-09!25;UBERON:0000203!2.02e-09!25;UBERON:0002619!2.09e-09!22;UBERON:0002298!9.96e-09!8;UBERON:0002308!1.76e-08!9;UBERON:0000125!1.76e-08!9;UBERON:0000481!3.47e-08!347;UBERON:0002420!3.87e-08!9;UBERON:0007245!3.87e-08!9;UBERON:0010009!3.87e-08!9;UBERON:0010011!3.87e-08!9;UBERON:0000454!3.87e-08!9;UBERON:0001950!9.04e-08!20;UBERON:0000483!1.78e-07!309;UBERON:0000119!3.74e-07!312;UBERON:0000025!5.54e-07!194;UBERON:0001871!6.32e-07!7;UBERON:0000062!7.10e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;5.80e-12;6!UBERON:0000073;4.70e-11;53!UBERON:0002616;4.70e-11;53!UBERON:0000125;1.64e-10;9!UBERON:0002308;1.64e-10;9!UBERON:0002780;1.57e-09;41!UBERON:0001890;1.57e-09;41!UBERON:0001896;1.64e-09;3!UBERON:0005290;1.64e-09;3!UBERON:0004732;2.13e-09;13!UBERON:0002110;2.59e-08;3!UBERON:0002108;3.81e-08;4!UBERON:0002114;3.97e-08;2!UBERON:0004733;8.36e-08;12!UBERON:0002028;8.36e-08;12!UBERON:0003528;1.26e-07;34!UBERON:0002020;1.26e-07;34!UBERON:0002420;3.46e-07;9!UBERON:0007245;3.46e-07;9!UBERON:0010009;3.46e-07;9!UBERON:0010011;3.46e-07;9!UBERON:0000454;3.46e-07;9!UBERON:0001897;8.71e-07;2!UBERON:0010225;8.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.88e-20,56;UBERON:0005068,1.88e-20,56;UBERON:0006241,1.88e-20,56;UBERON:0007135,1.88e-20,56;UBERON:0000073,8.79e-18,53;UBERON:0002616,8.79e-18,53;UBERON:0001017,2.86e-17,81;UBERON:0001016,4.03e-16,89;UBERON:0003075,1.45e-14,82;UBERON:0007284,1.45e-14,82;UBERON:0002346,1.42e-13,86;UBERON:0010371,3.11e-13,104;UBERON:0007023,5.39e-13,114;UBERON:0000955,2.31e-12,68;UBERON:0006238,2.31e-12,68;UBERON:0002298,6.65e-12,6;UBERON:0002780,7.13e-12,41;UBERON:0001890,7.13e-12,41;UBERON:0003080,7.13e-12,41;UBERON:0006240,7.13e-12,41;UBERON:0011216,1.74e-11,223;UBERON:0003076,1.02e-10,15;UBERON:0003057,1.02e-10,15;UBERON:0000125,1.38e-10,9;UBERON:0002308,1.38e-10,9;UBERON:0010314,9.06e-10,132;UBERON:0003528,1.64e-09,34;UBERON:0002020,1.64e-09,34;UBERON:0001896,1.73e-09,3;UBERON:0005290,1.73e-09,3;UBERON:0010096,1.73e-09,3;UBERON:0004732,2.57e-09,13;UBERON:0003056,5.38e-09,61;UBERON:0004121,2.65e-08,171;UBERON:0000924,2.65e-08,171;UBERON:0006601,2.65e-08,171;UBERON:0002110,3.04e-08,3;UBERON:0006242,3.04e-08,3;UBERON:0002108,4.08e-08,4;UBERON:0001893,5.97e-08,34;UBERON:0002114,7.44e-08,2;UBERON:0004733,1.04e-07,12;UBERON:0002028,1.04e-07,12;UBERON:0007277,1.04e-07,12;UBERON:0000025,1.54e-07,192;UBERON:0002420,2.35e-07,9;UBERON:0007245,2.35e-07,9;UBERON:0010009,2.35e-07,9;UBERON:0010011,2.35e-07,9;UBERON:0000454,2.35e-07,9;UBERON:0002791,4.50e-07,32;UBERON:0001897,9.01e-07,2;UBERON:0010225,9.01e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.378139268656271,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,1.46368447355514,1.45782745153634,1.62671520017326,1.0366105501537,3.02785021050754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,4.91413608338813,2.95394953340702,0,0.860919069801795,0,0.98775256867763,0,0.100528972411631,1.20364978706088,0,0,0,0.463721619900307,0.70445216541493,0,0,0,0,0,0,0,0,0,1.6798212819886,0.141775097242386,2.50763863567975,1.74380363108377,1.15014803749563,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.514137463516618,0,0.285826432630578,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,1.74306691720059,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.200506470303285,0.276242966807689,0,0,0.786746489756545,0,0.0770153371044148,0,0,0.633309773357254,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0.512900250232778,0,0.650756789328606,0.721287081534056,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.170453254832202,0,0.165284915360978,0.192190067365106,1.14851441245126,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,1.29848776109822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.146508179271894,0,0,0,0,0,0,0.994147647766298,1.68803299692615,0.445234820091624,0,0.422250816255987,0,0.552567831062295,1.51159648712566,0,0,0,0.179736702294654,0,0,0,0,0,0,0.556608588971108,0,0,0.437299999980979,0.724999575434793,1.137934482855,0.762760950878299,1.18193840883968,0,0,0,4.42870692906919,0.723578631752448,0,0.442317039724898,1.18219047581419,0.438770794307945,0,0.139423744278603,0.769502585037971,0.113942055847001,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,5.06395354867265,0.489698424477443,0.706765357169704,0,1.99052386215701,0.442287822516696,0,0,0,0,3.37005664903385,0,2.10838001152805,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0.91821828489147,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0.832048038078832,0,1.56787835863004,0,1.39781334593624,0,0,0,0,0.193978032976839,0,0.90392296312213,0.137041924646751,0,0.189932387867636,1.17330829640882,1.60317640503067,4.26905989478705,0,0,0,0,0,0.248505071130865,0.471388069233591,0,0,0,0,1.80126086612937,2.19048606227189,1.27746588066972,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,3.97614844904652,3.81369537112412,1.60753148465019,1.65047323916681,1.24632101408756,0,0,0.364497339948148,0,1.26089131678717,0.629455057619977,0,0,0.767660789277781,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,2.78449243988357,0,3.23207390903876,3.04134984008187,0.684347351537318,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,1.91502377331055,0,0,0,0,0,0,0.610131324509816,1.001527445652,15.4820482836319,10.9819761021484,3.04272374412779,0,0,0,0.570930667089935,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0,0.318593534327405,0,0.310525913752519,0,1.86089200190596,0.521745061811734,0.901545653983311,0.761610424337591,2.44122439922797,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0.926089897295336,0,0.179088841081487,0,2.63140859494449,0.530067437837643,0,0,0.256241518587947,0,0,0.829550616910385,0,0,0.163565394255844,0.327609848846413,0.491545817507439,0,0,0.640150378164845,0,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,1.27707087245721,0,0.252071696221718,0.138314504928436,2.09918339321406,1.42769420259154,0,0.11796972334774,0,0.231051332300676,0,0,0,0.676892955143315,0.20170506870352,0,0,0,2.21784129325568,0.607838261565552,0,0.413373593002368,0.317079050969534,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,1.3451348888753,0,0.682986574053893,0,0.115233987555779,0,0.475788130837822,0.263091094251396,1.41832609060762,0,0.39246546425257,0.157115589916002,0.280272163313789,1.82631744101899,10.3645243784938,5.25526856675755,3.78825684136279,0,0,0.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| ||
|short_description=p2@LRAT | |||
}} | }} |
Latest revision as of 07:43, 16 September 2015
Short description: | p2@LRAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRAT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502525_5end |
EntrezGene: | LRAT |
HGNC: | 6685 |
UniProt: | D6RC94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.77e-12 | 5 |