FFCP PHASE1:Hg19::chr2:238499337..238499408,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:238499337..238499408,-
|short_description=p1@RAB17
|description=CAGE_peak_1_at_RAB17_5end
|association_with_transcript=0bp_to_ENST00000411462,ENST000004142...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64284 | |EntrezGene=64284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16523 | |HGNC=16523 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0T6,F8WBE9 | |UniProt=C9J0T6,F8WBE9 | ||
|association_with_transcript=0bp_to_ENST00000411462,ENST00000414278,ENST00000416106_5end | |||
|cluster_id=chr2:238499337..238499408,- | |||
|description=CAGE_peak_1_at_RAB17_5end | |||
|id=chr2:238499337..238499408,- | |||
|ontology_enrichment_celltype=CL:0000066!9.14e-22!254;CL:0000223!6.77e-08!59;CL:0000039!1.02e-07!7;CL:0000586!1.02e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.55e-08;7!CL:0000586;2.55e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-18,253;CL:0000039,3.13e-08,7;CL:0000586,3.13e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.32e-15;29!UBERON:0006595;1.15e-12;86!UBERON:0001041;1.40e-12;30!UBERON:0009497;4.54e-08;13 | |||
|ontology_enrichment_disease=DOID:305!8.80e-34!106;DOID:0050687!2.54e-29!143;DOID:162!2.83e-12!235;DOID:14566!1.64e-11!239;DOID:299!7.54e-11!25;DOID:1749!6.35e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;2.54e-14;25!DOID:305;1.03e-11;106!DOID:0050687;4.85e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.09e-37,106;DOID:0050687,1.31e-32,143;DOID:162,2.15e-15,235;DOID:14566,1.15e-14,239;DOID:299,2.39e-14,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.03e-24!129;UBERON:0004185!4.03e-24!129;UBERON:0001007!1.79e-23!155;UBERON:0001555!1.79e-23!155;UBERON:0007026!1.79e-23!155;UBERON:0004119!2.84e-22!169;UBERON:0000925!2.84e-22!169;UBERON:0006595!2.84e-22!169;UBERON:0000077!1.96e-19!130;UBERON:0001041!9.19e-17!98;UBERON:0000466!4.62e-14!126;UBERON:0005911!5.42e-12!82;UBERON:0001048!3.46e-11!168;UBERON:0000065!1.67e-10!53;UBERON:0001004!1.84e-10!72;UBERON:0007023!2.11e-10!115;UBERON:0008947!8.28e-10!38;UBERON:0003258!8.28e-10!38;UBERON:0002530!9.97e-10!59;UBERON:0000464!1.72e-09!104;UBERON:0005177!2.22e-09!107;UBERON:0000481!1.12e-08!347;UBERON:0003929!1.19e-08!54;UBERON:0005153!3.78e-08!37;UBERON:0009497!4.50e-08!25;UBERON:0000015!4.50e-08!25;UBERON:0002423!4.50e-08!25;UBERON:0006235!4.50e-08!25;UBERON:0004161!4.50e-08!25;UBERON:0001737!4.97e-08!9;UBERON:0005409!5.35e-08!35;UBERON:0000072!7.58e-08!46;UBERON:0009569!1.03e-07!113;UBERON:0000062!1.10e-07!511;UBERON:0009856!1.89e-07!26;UBERON:0000160!3.77e-07!27;UBERON:0001557!6.05e-07!19;UBERON:0007499!6.26e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.88e-13;22!UBERON:0004921;3.10e-11;33!UBERON:0002423;1.16e-10;25!UBERON:0000160;1.32e-10;17!UBERON:0001737;1.48e-10;9!UBERON:0001557;1.48e-10;9!UBERON:0002365;6.56e-08;31!UBERON:0002330;6.56e-08;31!UBERON:0000058;1.91e-07;10!UBERON:0002294;2.70e-07;7!UBERON:0001173;2.70e-07;7!UBERON:0000065;8.86e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.93e-25,118;UBERON:0001007,1.44e-23,145;UBERON:0001555,1.44e-23,145;UBERON:0007026,1.44e-23,145;UBERON:0004119,1.17e-20,160;UBERON:0000925,1.17e-20,160;UBERON:0006595,1.17e-20,160;UBERON:0001041,3.45e-16,87;UBERON:0005911,2.19e-12,82;UBERON:0005177,2.24e-11,101;UBERON:0005409,8.94e-11,25;UBERON:0009497,1.18e-10,25;UBERON:0000015,1.18e-10,25;UBERON:0002423,1.18e-10,25;UBERON:0006235,1.18e-10,25;UBERON:0004161,1.18e-10,25;UBERON:0001737,1.24e-10,9;UBERON:0000160,1.29e-10,17;UBERON:0008947,2.15e-10,38;UBERON:0003258,2.15e-10,38;UBERON:0011216,5.80e-10,223;UBERON:0009569,6.44e-10,112;UBERON:0001048,7.16e-10,160;UBERON:0003929,5.85e-09,54;UBERON:0002530,6.77e-09,59;UBERON:0009854,9.07e-09,23;UBERON:0009856,9.78e-09,26;UBERON:0005172,1.11e-08,54;UBERON:0005173,1.11e-08,54;UBERON:0002365,4.21e-08,31;UBERON:0002330,4.21e-08,31;UBERON:0008835,4.79e-08,22;UBERON:0003894,4.79e-08,22;UBERON:0007499,4.87e-08,25;UBERON:0005153,1.45e-07,37;UBERON:0002417,3.12e-07,60;UBERON:0000916,3.12e-07,60;UBERON:0001004,7.56e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,4.97720486891308,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.853815942907168,0,1.16193942869518,0.518305275076852,2.27088765788066,0,0,0,0,0,0,2.24782920075703,2.86593973132773,1.20505514941741,1.7647035637183,1.52515610864684,2.13543557199987,2.69662616320329,2.94332197688019,3.07797725557112,0,0,0,0,25.3510069643662,28.5019892836512,20.6776467338491,0,7.87126006675927,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,3.95102198979638,3.43394464837949,0,0,0,0,0,0,0.895585227028483,1.74380363108377,1.15014803749563,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,2.70308752059526,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37242642508896,0,0.460404944679482,0,0,0,1.80479845162965,1.00119938235739,0,1.46139224653261,0,0,0,0,0,0,0,1.27438136522519,3.3243040357149,0.223874754722178,0,0,0,0.984043937099117,0,13.3953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1089684916599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67276215673701,0,0,0.111443384277478,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,1.19548792950642,1.10513566212459,18.6430233412164,0,0,0,4.76302261080832,8.41399520975363,0,0.690503839458535,0,0,0,0.185536196323703,0,8.5941161158127,11.4572599995016,3.62499787717397,1.0241410345695,7.37335585849022,13.0013224972365,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,2.1787692703798,0,0.615602068030377,0,14.9866537852239,9.15527972979676,17.7095216232873,0,0.549585560411174,0,0,0,0,0,0,0,0,0,4.00896322603251,2.28525931422807,5.37141671448975,0,10.9478812418636,14.7724132720576,14.0536933334734,0,0,0,0.943615861729479,0,0,0,2.73930466504926,0.971121518136371,13.4158696968793,13.308978765353,0,0.063186579628488,0,0,0,0,0,0,4.83836228250648,0,6.42171031839984,0.587954384486266,2.43765778425127,8.73633341210151,0.171986032471617,0,0,0,0.290967049465258,0,1.58186518546373,0,0,0.126621591911757,3.12882212375685,1.28254112402454,5.33632486848381,0,9.50996753217099,0,0,2.3048767678104,0,5.89235086541989,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,6.98975697164723,2.36349546921671,2.06039645952916,2.56133466645903,0.492137407573744,0,0,0.681017030557878,28.2925541298434,15.5419563354874,14.9558521690507,0,0,0,0,14.8154729722493,6.81909645754975,0,0,2.1110671705139,0,0,0,0,0,0,1.19730191562487,0,0,0.226624183040251,13.4828054983836,6.62534444561107,0,0,0.171086837884329,12.6866704017001,9.71765454366022,4.71612915298998,11.1844544943743,0,0,0,3.19170628885091,0,0,0,0,7.69565071626148,0,0,0,2.86704597845036,5.65738162837947,0.745156835296601,0,0,1.81978941049977,9.99128667407386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,5.36103978437314,0,0,0.463044948647668,0,0,1.54400723580486,4.16639694199544,0,0.964570191354574,0.506827321959218,1.02496607435179,0.345430341731199,0,0.138258436151731,0,0,0,0,0,8.02986068762783,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,4.41664733254615,0,0.550285795565037,4.96760364446454,0,0,0,0.451261970095544,0,17.193308247128,18.8572820026624,0.163771917510097,5.61853127624772,0,0.781078098613847,0,0.0634158101939068,0,11.5134131040008,0,0,4.72720982266503,0,0.336283722218824,0.606965604236632,5.46389259243114,6.03176117105944,0,0,0.0679697329768317,0.0657727735628491,1.06374456795571,1.22354542081276,1.88383422841234,0,6.16598759290336,1.82631744101899,0,0,1.57248397188644,0,4.99838129082939,0,0,0,0,0,15.48818491753,0,0,21.5927395597374,2.97838929107265,0,0,12.9752300885439,15.9003378456694,14.7520689228546,0,0,0,0,0,0.397901550322736,0,4.63078936359736,0,22.644426535001,23.4609440648152,16.8290861588047,31.511258856222,0.245148321753905,41.2433957427845,0,0,0,0,0,0.128915775947154,0,1.42843150884526,0.352894871715692,4.49351653459342,9.49437304720472,13.3031492187317,0,0,0.135982980381829,0,10.580536810308,0,0,0,0,0,0.253397002022874,0.203977659483963,6.14600032110789,15.0707635237146,1.0028301571695,0.606229585745915,0,0,0,1.0661699095049,4.04709533488359,0.258355639344024,0.31037357147929,0,25.5225104695441,8.48892193624521,0.653150243690884,0,0.942928742204225,4.37505452895326,0.665320713092027,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| ||
|short_description=p1@RAB17 | |||
}} | }} |
Latest revision as of 04:10, 16 September 2015
Short description: | p1@RAB17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000411462, ENST00000414278, ENST00000416106_5end |
EntrezGene: | RAB17 |
HGNC: | 16523 |
UniProt: | C9J0T6F8WBE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-18 | 253 |
germ line cell | 3.13e-08 | 7 |
germ cell | 3.13e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.09e-37 | 106 |
cell type cancer | 1.31e-32 | 143 |
cancer | 2.15e-15 | 235 |
disease of cellular proliferation | 1.15e-14 | 239 |
adenocarcinoma | 2.39e-14 | 25 |