FFCP PHASE1:Mm9::chr11:95218023..95218036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:95218023..95218036,- | |||
|description=CAGE_peak_at_chr11:95218023..95218036,- | |description=CAGE_peak_at_chr11:95218023..95218036,- | ||
|id=chr11:95218023..95218036,- | |id=chr11:95218023..95218036,- | ||
|ontology_enrichment_celltype=CL:0000542!1.07e-10!13;CL:0000051!1.07e-10!13;CL:0000838!3.71e-10!12;CL:0000988!1.55e-09!32;CL:0002032!1.55e-09!32;CL:0000037!1.55e-09!32;CL:0000566!1.55e-09!32;CL:0000837!1.55e-09!32;CL:0000084!1.72e-09!11;CL:0000827!1.72e-09!11;CL:0002031!9.35e-09!25;CL:0000791!1.18e-07!9;CL:0000789!1.18e-07!9;CL:0002420!1.18e-07!9;CL:0002419!1.18e-07!9;CL:0000790!1.18e-07!9;CL:0000738!2.17e-07!17;CL:0002087!2.17e-07!17;CL:0000624!9.49e-07!8 | |ontology_enrichment_celltype=CL:0000542!1.07e-10!13;CL:0000051!1.07e-10!13;CL:0000838!3.71e-10!12;CL:0000988!1.55e-09!32;CL:0002032!1.55e-09!32;CL:0000037!1.55e-09!32;CL:0000566!1.55e-09!32;CL:0000837!1.55e-09!32;CL:0000084!1.72e-09!11;CL:0000827!1.72e-09!11;CL:0002031!9.35e-09!25;CL:0000791!1.18e-07!9;CL:0000789!1.18e-07!9;CL:0002420!1.18e-07!9;CL:0002419!1.18e-07!9;CL:0000790!1.18e-07!9;CL:0000738!2.17e-07!17;CL:0002087!2.17e-07!17;CL:0000624!9.49e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.14e-09,25;CL:0000084,1.10e-08,11;CL:0000827,1.10e-08,11;CL:0000838,6.70e-08,12;CL:0000791,8.10e-08,9;CL:0000789,8.10e-08,9;CL:0002420,8.10e-08,9;CL:0002419,8.10e-08,9;CL:0000790,8.10e-08,9;CL:0000553,2.26e-07,6;CL:0000556,2.26e-07,6;CL:0000542,3.08e-07,13;CL:0000051,3.08e-07,13;CL:0000988,8.51e-07,32;CL:0002032,8.51e-07,32;CL:0000037,8.51e-07,32;CL:0000837,8.51e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.74e-08,3;DOID:4045,2.74e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.61e-15!29;UBERON:0002390!2.20e-14!45;UBERON:0003061!2.20e-14!45;UBERON:0002193!2.57e-14!48;UBERON:0003408!6.58e-13!24;UBERON:0002370!3.93e-12!23;UBERON:0000974!3.93e-12!23;UBERON:0004807!3.93e-12!23;UBERON:0005058!3.93e-12!23;UBERON:0003351!3.93e-12!23;UBERON:0009113!3.93e-12!23;UBERON:0003295!3.93e-12!23;UBERON:0009722!3.93e-12!23;UBERON:0005562!3.93e-12!23;UBERON:0007690!3.93e-12!23;UBERON:0006562!2.14e-11!24;UBERON:0001557!2.14e-11!24;UBERON:0001042!2.14e-11!24;UBERON:0008814!2.14e-11!24;UBERON:0009145!2.14e-11!24;UBERON:0001004!1.51e-10!42;UBERON:0000065!6.70e-10!41;UBERON:0002405!7.56e-10!70;UBERON:0000072!1.58e-09!27;UBERON:0005057!6.89e-09!51;UBERON:0003081!1.75e-08!88 | |ontology_enrichment_uberon=UBERON:0004177!1.61e-15!29;UBERON:0002390!2.20e-14!45;UBERON:0003061!2.20e-14!45;UBERON:0002193!2.57e-14!48;UBERON:0003408!6.58e-13!24;UBERON:0002370!3.93e-12!23;UBERON:0000974!3.93e-12!23;UBERON:0004807!3.93e-12!23;UBERON:0005058!3.93e-12!23;UBERON:0003351!3.93e-12!23;UBERON:0009113!3.93e-12!23;UBERON:0003295!3.93e-12!23;UBERON:0009722!3.93e-12!23;UBERON:0005562!3.93e-12!23;UBERON:0007690!3.93e-12!23;UBERON:0006562!2.14e-11!24;UBERON:0001557!2.14e-11!24;UBERON:0001042!2.14e-11!24;UBERON:0008814!2.14e-11!24;UBERON:0009145!2.14e-11!24;UBERON:0001004!1.51e-10!42;UBERON:0000065!6.70e-10!41;UBERON:0002405!7.56e-10!70;UBERON:0000072!1.58e-09!27;UBERON:0005057!6.89e-09!51;UBERON:0003081!1.75e-08!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.67e-16,48;UBERON:0002405,1.67e-16,48;UBERON:0002390,9.49e-16,45;UBERON:0003061,9.49e-16,45;UBERON:0004177,1.34e-15,29;UBERON:0005057,1.34e-15,29;UBERON:0002370,1.39e-12,23;UBERON:0000974,1.39e-12,23;UBERON:0004807,1.39e-12,23;UBERON:0005058,1.39e-12,23;UBERON:0003351,1.39e-12,23;UBERON:0009113,1.39e-12,23;UBERON:0003295,1.39e-12,23;UBERON:0009722,1.39e-12,23;UBERON:0005562,1.39e-12,23;UBERON:0007690,1.39e-12,23;UBERON:0000077,2.14e-12,35;UBERON:0006562,5.79e-12,24;UBERON:0003408,5.79e-12,24;UBERON:0001557,5.79e-12,24;UBERON:0001042,5.79e-12,24;UBERON:0008814,5.79e-12,24;UBERON:0009145,5.79e-12,24;UBERON:0000072,2.20e-10,27;UBERON:0000065,3.52e-10,41;UBERON:0001004,7.26e-10,42;UBERON:0007811,3.09e-07,36;UBERON:0003081,4.21e-07,87;UBERON:0001041,5.25e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,13.8161956082487,0.140788722151667,0.234064526321993,0.34243593645101,0,11.9840510951844,7.78041581529077,1.33243904726265,0.809901069559304,0,3.3123527362615,4.38766187538364,2.97072756258621,0.17008658030214,0.992909512008853,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,1.5626706890476,2.61761871986899,7.05877785637217,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,0.335565212115473,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.17875767294343,0,0,0,0,0,0,0,0,0.86759614151947,0.884610551949874,0,0.883366073841574,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,1.84753190166605,0,0,0,0,0,0,0,0.472905432318573,0,0.159454768657487,1.96635977658886,2.07221978239075,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0.241251699712623,0.358117032009409,0.492422699235184,0,0,2.39219233116994,0,0.185194527369712,0.753473828018764,1.50363650493128,1.83022538565218,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,14.220500428268,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,1.20195449519969,1.03382669022204,2.3222283488074,2.28620419965,3.42809029465258,3.8983152295901,4.42574471545516,11.2201826094306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,13.8161956082487,0.140788722151667,0.234064526321993,0.34243593645101,0,11.9840510951844,7.78041581529077,1.33243904726265,0.809901069559304,0,3.3123527362615,4.38766187538364,2.97072756258621,0.17008658030214,0.992909512008853,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,1.5626706890476,2.61761871986899,7.05877785637217,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,0.335565212115473,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.17875767294343,0,0,0,0,0,0,0,0,0.86759614151947,0.884610551949874,0,0.883366073841574,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,1.84753190166605,0,0,0,0,0,0,0,0.472905432318573,0,0.159454768657487,1.96635977658886,2.07221978239075,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0.241251699712623,0.358117032009409,0.492422699235184,0,0,2.39219233116994,0,0.185194527369712,0.753473828018764,1.50363650493128,1.83022538565218,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,14.220500428268,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,1.20195449519969,1.03382669022204,2.3222283488074,2.28620419965,3.42809029465258,3.8983152295901,4.42574471545516,11.2201826094306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:95218023..95218036,- | |short_description=p@chr11:95218023..95218036,- | ||
}} | }} |
Latest revision as of 09:48, 4 August 2015
Short description: | p@chr11:95218023..95218036, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:95218023..95218036, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.14e-09 | 25 |
T cell | 1.10e-08 | 11 |
pro-T cell | 1.10e-08 | 11 |
lymphoid lineage restricted progenitor cell | 6.70e-08 | 12 |
mature alpha-beta T cell | 8.10e-08 | 9 |
alpha-beta T cell | 8.10e-08 | 9 |
immature T cell | 8.10e-08 | 9 |
mature T cell | 8.10e-08 | 9 |
immature alpha-beta T cell | 8.10e-08 | 9 |
megakaryocyte progenitor cell | 2.26e-07 | 6 |
megakaryocyte | 2.26e-07 | 6 |
lymphocyte | 3.08e-07 | 13 |
common lymphoid progenitor | 3.08e-07 | 13 |
hematopoietic cell | 8.51e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.51e-07 | 32 |
hematopoietic stem cell | 8.51e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.51e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.67e-16 | 48 |
immune system | 1.67e-16 | 48 |
hematopoietic system | 9.49e-16 | 45 |
blood island | 9.49e-16 | 45 |
hemopoietic organ | 1.34e-15 | 29 |
immune organ | 1.34e-15 | 29 |
thymus | 1.39e-12 | 23 |
neck | 1.39e-12 | 23 |
respiratory system epithelium | 1.39e-12 | 23 |
hemolymphoid system gland | 1.39e-12 | 23 |
pharyngeal epithelium | 1.39e-12 | 23 |
thymic region | 1.39e-12 | 23 |
pharyngeal gland | 1.39e-12 | 23 |
entire pharyngeal arch endoderm | 1.39e-12 | 23 |
thymus primordium | 1.39e-12 | 23 |
early pharyngeal endoderm | 1.39e-12 | 23 |
mixed endoderm/mesoderm-derived structure | 2.14e-12 | 35 |
pharynx | 5.79e-12 | 24 |
gland of gut | 5.79e-12 | 24 |
upper respiratory tract | 5.79e-12 | 24 |
chordate pharynx | 5.79e-12 | 24 |
pharyngeal arch system | 5.79e-12 | 24 |
pharyngeal region of foregut | 5.79e-12 | 24 |
segment of respiratory tract | 2.20e-10 | 27 |
respiratory tract | 3.52e-10 | 41 |
respiratory system | 7.26e-10 | 42 |
craniocervical region | 3.09e-07 | 36 |
lateral plate mesoderm | 4.21e-07 | 87 |
foregut | 5.25e-07 | 80 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.74e-08 | 3 |
muscle cancer | 2.74e-08 | 3 |