FFCP PHASE1:Hg19::chr2:21230697..21230704,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:21230697..21230704,-
|short_description=p59@APOB
|description=CAGE_peak_59_at_APOB_5end
|association_with_transcript=-124bp_to_X03045_5end
|EntrezGene=338...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-124bp_to_X03045_5end | |||
|cluster_id=chr2:21230697..21230704,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_59_at_APOB_5end | |||
|id=chr2:21230697..21230704,- | |||
|ontology_enrichment_celltype=CL:0000181!1.17e-37!12;CL:0000417!1.17e-37!12;CL:0000668!1.17e-37!12;CL:0000414!1.17e-37!12;CL:0000412!1.17e-37!12;CL:0000182!1.17e-37!12;CL:0000223!6.80e-10!59;CL:0002617!2.12e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.05e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.04e-59,12;CL:0000223,2.42e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.16e-29;11!UBERON:0009497;8.16e-25;13!UBERON:0001041;5.36e-11;30!UBERON:0003104;1.48e-10;31!CL:0000223;3.26e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.75e-32!19;UBERON:0006925!4.75e-32!19;UBERON:0008836!4.75e-32!19;UBERON:0008835!1.28e-27!22;UBERON:0003894!1.28e-27!22;UBERON:0009854!2.12e-26!23;UBERON:0007499!2.99e-24!25;UBERON:0009497!2.99e-24!25;UBERON:0000015!2.99e-24!25;UBERON:0002423!2.99e-24!25;UBERON:0006235!2.99e-24!25;UBERON:0004161!2.99e-24!25;UBERON:0005057!2.67e-23!26;UBERON:0009856!2.67e-23!26;UBERON:0002365!1.84e-19!31;UBERON:0002330!1.84e-19!31;UBERON:0002368!3.53e-17!35;UBERON:0003929!3.95e-14!54;UBERON:0000949!3.08e-13!45;UBERON:0004921!2.21e-12!129;UBERON:0004185!2.21e-12!129;UBERON:0000160!5.54e-11!27;UBERON:0005172!1.01e-10!55;UBERON:0005173!1.01e-10!55;UBERON:0001007!4.66e-10!155;UBERON:0001555!4.66e-10!155;UBERON:0007026!4.66e-10!155;UBERON:0002530!5.90e-10!59;UBERON:0002417!1.31e-09!61;UBERON:0000916!1.31e-09!61;UBERON:0004119!4.25e-09!169;UBERON:0000925!4.25e-09!169;UBERON:0006595!4.25e-09!169;UBERON:0005911!5.06e-09!82;UBERON:0005409!1.58e-08!35;UBERON:0002108!4.65e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.89e-51;19!UBERON:0006925;9.89e-51;19!UBERON:0002423;1.44e-38;25!UBERON:0002108;5.91e-36;4!UBERON:0002365;1.79e-30;31!UBERON:0002330;1.79e-30;31!UBERON:0002368;1.05e-25;33!UBERON:0000949;9.91e-21;43!UBERON:0001007;3.64e-12;81!UBERON:0005172;6.61e-12;52!UBERON:0005173;6.61e-12;52!UBERON:0002530;7.62e-11;57!UBERON:0000160;1.61e-10;17!UBERON:0002417;4.44e-10;58!UBERON:0000916;4.44e-10;58!UBERON:0005409;2.30e-08;22!UBERON:0002114;6.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.83e-51,19;UBERON:0006925,6.83e-51,19;UBERON:0008836,6.83e-51,19;UBERON:0008835,5.82e-44,22;UBERON:0003894,5.82e-44,22;UBERON:0009854,4.72e-42,23;UBERON:0007499,1.08e-38,25;UBERON:0009497,1.08e-38,25;UBERON:0000015,1.08e-38,25;UBERON:0002423,1.08e-38,25;UBERON:0006235,1.08e-38,25;UBERON:0004161,1.08e-38,25;UBERON:0009856,3.33e-37,26;UBERON:0002108,1.08e-35,4;UBERON:0002365,3.34e-31,31;UBERON:0002330,3.34e-31,31;UBERON:0002368,1.24e-27,35;UBERON:0000949,1.79e-21,45;UBERON:0003929,7.12e-18,54;UBERON:0005172,7.12e-18,54;UBERON:0005173,7.12e-18,54;UBERON:0002530,2.40e-16,59;UBERON:0004921,3.14e-16,118;UBERON:0002417,4.53e-16,60;UBERON:0000916,4.53e-16,60;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160;UBERON:0005911,1.06e-11,82;UBERON:0001041,5.14e-11,87;UBERON:0000160,1.90e-10,17;UBERON:0005177,1.89e-09,101;UBERON:0009569,1.72e-08,112;UBERON:0011216,2.87e-08,223;UBERON:0003914,4.10e-08,117;UBERON:0002114,7.76e-08,2;UBERON:0005256,9.10e-08,122;UBERON:0005409,2.04e-07,25 | |||
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|short_description=p59@APOB | |||
}} | }} |
Latest revision as of 23:09, 19 September 2015
Short description: | p59@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_59_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -124bp_to_X03045_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.04e-59 | 12 |
endodermal cell | 2.42e-12 | 58 |