FF:11311-117C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005177 | |||
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005177 | |||
|accession_numbers=CAGE;DRX008371;DRR009243;DRZ000668;DRZ002053;DRZ012018;DRZ013403 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037222;DRR041588;DRZ007230 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000623 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000623 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.50!572.71!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.22!224.47!STAT4;;chr17:45810594..45810608,+!p1@TBX21!2.12!129.81!TBX21;;chr2:145271342..145271377,-!p5@ZEB2!2.08!119.24!ZEB2;;chr19:45971246..45971265,+!p1@FOSB!2.01!1748.31!FOSB;;chr2:157189180..157189290,-!p1@NR4A2!1.97!456.91!NR4A2;;chr20:50159198..50159299,-!p1@NFATC2!1.96!128.95!NFATC2;;chr6:391743..391759,+!p1@IRF4!1.86!71.37!IRF4;;chr9:117150254..117150271,-!p1@AKNA!1.84!178.76!AKNA;;chr7:50343634..50343717,+!p2@IKZF1!1.84!67.71!IKZF1;;chr10:8096631..8096660,+!p1@GATA3!1.83!80.64!GATA3;;chr6:106546808..106546833,+!p3@PRDM1!1.81!79.57!PRDM1;;chr15:60884706..60884743,-!p1@RORA!1.79!295.63!RORA;;chr19:54041669..54041697,+!p2@ZNF331!1.77!58.22!ZNF331;;chr9:102584262..102584276,+!p1@NR4A3!1.76!122.91!NR4A3;;chr17:38020392..38020477,-!p1@IKZF3!1.76!57.14!IKZF3;;chr14:75745523..75745537,+!p1@FOS!1.75!6186.14!FOS;;chr14:75746722..75746777,+!p2@FOS!1.74!68.14!FOS;;chr10:8096772..8096787,+!p2@GATA3!1.73!61.24!GATA3;;chr19:54058073..54058088,+!p1@ZNF331!1.73!53.26!ZNF331;;chr1:26697243..26697258,-!p1@ZNF683!1.72!51.53!ZNF683;;chr3:63953435..63953499,+!p1@ATXN7!1.70!49.59!ATXN7;;chr8:123793988..123794016,+!p1@ZHX2!1.68!80.86!ZHX2;;chr20:56195474..56195506,-!p1@ZBP1!1.68!46.79!ZBP1;;chr14:64971288..64971316,-!p2@ZBTB25!1.66!134.55!ZBTB25;;chrX:106960285..106960299,-!p1@TSC22D3!1.65!1115.87!TSC22D3;;chr12:72056800..72056834,+!p1@THAP2!1.64!56.49!THAP2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.91!STAT4;;chr3:39195075..39195088,-!p1@CSRNP1!1.61!237.19!CSRNP1;;chr1:59249688..59249703,-!p3@JUN!1.61!225.55!JUN;;chr9:3525727..3525828,-!p2@RFX3!1.59!94.66!RFX3;;chr2:231090433..231090469,+!p1@SP140!1.57!36.23!SP140;;chr5:133450365..133450444,+!p1@TCF7!1.56!153.74!TCF7;;chrX:106960180..106960197,-!p2@TSC22D3!1.54!123.34!TSC22D3;;chr19:16435625..16435682,+!p1@KLF2!1.51!951.35!KLF2;;chr2:192015750..192015793,-!p2@STAT4!1.51!41.83!STAT4;;chrY:21906594..21906622,-!p1@KDM5D!1.51!31.70!KDM5D;;chr3:5020939..5020952,+!p2@BHLHE40!1.50!94.44!BHLHE40;;chr10:35484053..35484076,+!p1@CREM!1.49!73.31!CREM;;chrX:106960221..106960236,-!p3@TSC22D3!1.47!76.33!TSC22D3;;chr9:102584128..102584144,+!p3@NR4A3!1.47!53.04!NR4A3;;chr4:57522166..57522260,-!p2@HOPX!1.46!31.70!HOPX;;chr5:133451294..133451310,+!p2@TCF7!1.46!27.82!TCF7;;chr14:35873947..35873965,-!p1@NFKBIA!1.45!1634.46!NFKBIA;;chr1:59249707..59249727,-!p1@JUN!1.45!1075.98!JUN;;chr10:3824332..3824425,-!p4@KLF6!1.45!43.77!KLF6;;chr6:106546834..106546850,+!p4@PRDM1!1.45!27.38!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.45!27.38!ZNF683;;chr4:103422499..103422632,+!p1@NFKB1!1.43!521.60!NFKB1;;chr5:131826457..131826514,-!p1@IRF1!1.42!937.33!IRF1;;chr14:35874077..35874091,-!p8@NFKBIA!1.42!25.23!NFKBIA;;chr2:145277640..145277771,-!p1@ZEB2!1.41!316.97!ZEB2;;chr3:23986824..23986848,+!p2@NR1D2!1.41!132.61!NR1D2;;chr9:102584241..102584261,+!p4@NR4A3!1.41!37.73!NR4A3;;chr1:151030536..151030549,+!p8@MLLT11!1.40!24.37!MLLT11;;chr16:85932760..85932775,+!p1@IRF8!1.40!23.93!IRF8;;chr6:91006518..91006570,-!p1@BACH2!1.39!52.61!BACH2;;chr8:81397820..81397836,+!p2@ZBTB10!1.39!29.54!ZBTB10;;chr17:37934365..37934387,-!p2@IKZF3!1.39!23.72!IKZF3;;chr2:61108878..61108891,+!p5@REL!1.38!23.07!REL;;chr2:231090471..231090504,+!p2@SP140!1.38!22.86!SP140;;chr2:208394817..208394834,+!p3@CREB1!1.35!84.53!CREB1;;chr19:19729477..19729542,-!p1@PBX4!1.35!45.50!PBX4;;chr8:67525443..67525459,-!p2@MYBL1!1.34!30.83!MYBL1;;chr18:46475696..46475713,-!p1@SMAD7!1.34!23.50!SMAD7;;chr7:104654690..104654704,+!p2@MLL5!1.33!40.32!MLL5;;chr7:104654718..104654741,+!p3@MLL5!1.33!29.54!MLL5;;chr1:25291475..25291511,-!p2@RUNX3!1.33!20.48!RUNX3;;chr7:50343895..50343936,+!p5@IKZF1!1.32!19.84!IKZF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.31!47.65!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.31!21.56!KLF12;;chr2:68592406..68592424,+!p1@PLEK!1.31!19.41!PLEK;;chr8:60031619..60031676,-!p1@TOX!1.30!40.54!TOX;;chr8:81397876..81397898,+!p5@ZBTB10!1.30!22.43!ZBTB10;;chr8:123793252..123793266,+!p10@ZHX2!1.30!18.76!ZHX2;;chr2:61108695..61108753,+!p1@REL!1.29!123.99!REL;;chr8:81397846..81397860,+!p3@ZBTB10!1.29!23.07!ZBTB10;;chr19:54041645..54041661,+!p5@ZNF331!1.29!18.33!ZNF331;;chr3:18486354..18486377,-!p2@SATB1!1.28!22.43!SATB1;;chr11:67007548..67007610,+!p3@KDM2A!1.27!127.65!KDM2A;;chr1:10754477..10754517,-!p1@CASZ1!1.27!29.33!CASZ1;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.07!THAP2;;chr6:106546786..106546802,+!p6@PRDM1!1.27!17.47!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.26!3836.88!JUNB;;chr21:36421347..36421380,-!p8@RUNX1!1.25!16.82!RUNX1;;chr2:157189617..157189667,-!p4@NR4A2!1.25!16.60!NR4A2;;chr4:57522674..57522699,-!p5@HOPX!1.25!16.60!HOPX;;chr2:43453734..43453751,-!p1@ZFP36L2!1.24!1701.30!ZFP36L2;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!98.97!CSRNP1;;chr10:35416142..35416169,+!p3@CREM!1.24!42.91!CREM;;chr17:38497662..38497713,+!p4@RARA!1.24!18.98!RARA;;chr1:59249645..59249656,-!p4@JUN!1.23!40.11!JUN;;chr2:97202480..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| |expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.50!572.71!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.22!224.47!STAT4;;chr17:45810594..45810608,+!p1@TBX21!2.12!129.81!TBX21;;chr2:145271342..145271377,-!p5@ZEB2!2.08!119.24!ZEB2;;chr19:45971246..45971265,+!p1@FOSB!2.01!1748.31!FOSB;;chr2:157189180..157189290,-!p1@NR4A2!1.97!456.91!NR4A2;;chr20:50159198..50159299,-!p1@NFATC2!1.96!128.95!NFATC2;;chr6:391743..391759,+!p1@IRF4!1.86!71.37!IRF4;;chr9:117150254..117150271,-!p1@AKNA!1.84!178.76!AKNA;;chr7:50343634..50343717,+!p2@IKZF1!1.84!67.71!IKZF1;;chr10:8096631..8096660,+!p1@GATA3!1.83!80.64!GATA3;;chr6:106546808..106546833,+!p3@PRDM1!1.81!79.57!PRDM1;;chr15:60884706..60884743,-!p1@RORA!1.79!295.63!RORA;;chr19:54041669..54041697,+!p2@ZNF331!1.77!58.22!ZNF331;;chr9:102584262..102584276,+!p1@NR4A3!1.76!122.91!NR4A3;;chr17:38020392..38020477,-!p1@IKZF3!1.76!57.14!IKZF3;;chr14:75745523..75745537,+!p1@FOS!1.75!6186.14!FOS;;chr14:75746722..75746777,+!p2@FOS!1.74!68.14!FOS;;chr10:8096772..8096787,+!p2@GATA3!1.73!61.24!GATA3;;chr19:54058073..54058088,+!p1@ZNF331!1.73!53.26!ZNF331;;chr1:26697243..26697258,-!p1@ZNF683!1.72!51.53!ZNF683;;chr3:63953435..63953499,+!p1@ATXN7!1.70!49.59!ATXN7;;chr8:123793988..123794016,+!p1@ZHX2!1.68!80.86!ZHX2;;chr20:56195474..56195506,-!p1@ZBP1!1.68!46.79!ZBP1;;chr14:64971288..64971316,-!p2@ZBTB25!1.66!134.55!ZBTB25;;chrX:106960285..106960299,-!p1@TSC22D3!1.65!1115.87!TSC22D3;;chr12:72056800..72056834,+!p1@THAP2!1.64!56.49!THAP2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.91!STAT4;;chr3:39195075..39195088,-!p1@CSRNP1!1.61!237.19!CSRNP1;;chr1:59249688..59249703,-!p3@JUN!1.61!225.55!JUN;;chr9:3525727..3525828,-!p2@RFX3!1.59!94.66!RFX3;;chr2:231090433..231090469,+!p1@SP140!1.57!36.23!SP140;;chr5:133450365..133450444,+!p1@TCF7!1.56!153.74!TCF7;;chrX:106960180..106960197,-!p2@TSC22D3!1.54!123.34!TSC22D3;;chr19:16435625..16435682,+!p1@KLF2!1.51!951.35!KLF2;;chr2:192015750..192015793,-!p2@STAT4!1.51!41.83!STAT4;;chrY:21906594..21906622,-!p1@KDM5D!1.51!31.70!KDM5D;;chr3:5020939..5020952,+!p2@BHLHE40!1.50!94.44!BHLHE40;;chr10:35484053..35484076,+!p1@CREM!1.49!73.31!CREM;;chrX:106960221..106960236,-!p3@TSC22D3!1.47!76.33!TSC22D3;;chr9:102584128..102584144,+!p3@NR4A3!1.47!53.04!NR4A3;;chr4:57522166..57522260,-!p2@HOPX!1.46!31.70!HOPX;;chr5:133451294..133451310,+!p2@TCF7!1.46!27.82!TCF7;;chr14:35873947..35873965,-!p1@NFKBIA!1.45!1634.46!NFKBIA;;chr1:59249707..59249727,-!p1@JUN!1.45!1075.98!JUN;;chr10:3824332..3824425,-!p4@KLF6!1.45!43.77!KLF6;;chr6:106546834..106546850,+!p4@PRDM1!1.45!27.38!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.45!27.38!ZNF683;;chr4:103422499..103422632,+!p1@NFKB1!1.43!521.60!NFKB1;;chr5:131826457..131826514,-!p1@IRF1!1.42!937.33!IRF1;;chr14:35874077..35874091,-!p8@NFKBIA!1.42!25.23!NFKBIA;;chr2:145277640..145277771,-!p1@ZEB2!1.41!316.97!ZEB2;;chr3:23986824..23986848,+!p2@NR1D2!1.41!132.61!NR1D2;;chr9:102584241..102584261,+!p4@NR4A3!1.41!37.73!NR4A3;;chr1:151030536..151030549,+!p8@MLLT11!1.40!24.37!MLLT11;;chr16:85932760..85932775,+!p1@IRF8!1.40!23.93!IRF8;;chr6:91006518..91006570,-!p1@BACH2!1.39!52.61!BACH2;;chr8:81397820..81397836,+!p2@ZBTB10!1.39!29.54!ZBTB10;;chr17:37934365..37934387,-!p2@IKZF3!1.39!23.72!IKZF3;;chr2:61108878..61108891,+!p5@REL!1.38!23.07!REL;;chr2:231090471..231090504,+!p2@SP140!1.38!22.86!SP140;;chr2:208394817..208394834,+!p3@CREB1!1.35!84.53!CREB1;;chr19:19729477..19729542,-!p1@PBX4!1.35!45.50!PBX4;;chr8:67525443..67525459,-!p2@MYBL1!1.34!30.83!MYBL1;;chr18:46475696..46475713,-!p1@SMAD7!1.34!23.50!SMAD7;;chr7:104654690..104654704,+!p2@MLL5!1.33!40.32!MLL5;;chr7:104654718..104654741,+!p3@MLL5!1.33!29.54!MLL5;;chr1:25291475..25291511,-!p2@RUNX3!1.33!20.48!RUNX3;;chr7:50343895..50343936,+!p5@IKZF1!1.32!19.84!IKZF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.31!47.65!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.31!21.56!KLF12;;chr2:68592406..68592424,+!p1@PLEK!1.31!19.41!PLEK;;chr8:60031619..60031676,-!p1@TOX!1.30!40.54!TOX;;chr8:81397876..81397898,+!p5@ZBTB10!1.30!22.43!ZBTB10;;chr8:123793252..123793266,+!p10@ZHX2!1.30!18.76!ZHX2;;chr2:61108695..61108753,+!p1@REL!1.29!123.99!REL;;chr8:81397846..81397860,+!p3@ZBTB10!1.29!23.07!ZBTB10;;chr19:54041645..54041661,+!p5@ZNF331!1.29!18.33!ZNF331;;chr3:18486354..18486377,-!p2@SATB1!1.28!22.43!SATB1;;chr11:67007548..67007610,+!p3@KDM2A!1.27!127.65!KDM2A;;chr1:10754477..10754517,-!p1@CASZ1!1.27!29.33!CASZ1;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.07!THAP2;;chr6:106546786..106546802,+!p6@PRDM1!1.27!17.47!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.26!3836.88!JUNB;;chr21:36421347..36421380,-!p8@RUNX1!1.25!16.82!RUNX1;;chr2:157189617..157189667,-!p4@NR4A2!1.25!16.60!NR4A2;;chr4:57522674..57522699,-!p5@HOPX!1.25!16.60!HOPX;;chr2:43453734..43453751,-!p1@ZFP36L2!1.24!1701.30!ZFP36L2;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!98.97!CSRNP1;;chr10:35416142..35416169,+!p3@CREM!1.24!42.91!CREM;;chr17:38497662..38497713,+!p4@RARA!1.24!18.98!RARA;;chr1:59249645..59249656,-!p4@JUN!1.23!40.11!JUN;;chr2:97202480..97202499,+!p1@ARID5A!1.22!155.68!ARID5A;;chr4:38665769..38665801,+!p2@KLF3!1.22!138.00!KLF3;;chr1:91487774..91487802,-!p2@ZNF644!1.22!40.54!ZNF644;;chr1:25256175..25256228,-!p5@RUNX3!1.22!15.53!RUNX3;;chr10:3827389..3827408,-!p1@KLF6!1.21!1139.81!KLF6;;chr4:57522598..57522664,-!p3@HOPX!1.21!15.09!HOPX;;chr19:45972701..45972774,+!p2@FOSB!1.19!19.62!FOSB;;chr18:3449330..3449344,+!p10@TGIF1!1.19!18.98!TGIF1;;chr3:39195139..39195150,-!p3@CSRNP1!1.19!18.33!CSRNP1;;chr1:37940170..37940190,+!p1@ZC3H12A!1.18!172.29!ZC3H12A;;chr9:102584159..102584174,+!p2@NR4A3!1.18!25.66!NR4A3;;chr17:7388010..7388017,-!p5@ZBTB4!1.18!23.93!ZBTB4;;chr2:61108808..61108821,+!p3@REL!1.17!17.47!REL;;chr14:99738138..99738163,-!p1@BCL11B!1.17!13.80!BCL11B;;chr9:102584278..102584285,+!p5@NR4A3!1.17!13.80!NR4A3;;chr11:67007611..67007622,+!p6@KDM2A!1.16!18.11!KDM2A;;chr14:75988831..75988847,+!p2@BATF!1.16!13.37!BATF;;chr10:104154246..104154347,+!p3@NFKB2!1.15!79.14!NFKB2;;chr14:35872962..35873025,-!p3@NFKBIA!1.15!33.21!NFKBIA;;chr14:35872926..35872951,-!p4@NFKBIA!1.15!18.54!NFKBIA;;chr12:72056749..72056767,+!p6@THAP2!1.15!14.66!THAP2;;chr8:123794038..123794056,+!p5@ZHX2!1.15!13.15!ZHX2;;chr2:97203110..97203159,+!p4@ARID5A!1.15!13.15!ARID5A;;chr3:27763807..27763822,-!p1@EOMES!1.15!13.15!EOMES;;chr15:60884747..60884774,-!p3@RORA!1.14!31.48!RORA;;chr7:106809470..106809481,+!p2@HBP1!1.14!17.90!HBP1;;chr20:44600199..44600219,-!p3@ZNF335!1.14!17.47!ZNF335;;chr17:38020516..38020544,-!p5@IKZF3!1.14!12.94!IKZF3;;chr10:104154415..104154434,+!p5@NFKB2!1.14!12.94!NFKB2;;chr4:109087445..109087463,-!p1@LEF1!1.14!12.94!LEF1;;chr12:51158359..51158395,+!p4@ATF1!1.14!12.72!ATF1;;chr6:12009042..12009092,+!p6@HIVEP1!1.13!16.17!HIVEP1;;chr8:41909982..41910009,-!p2@KAT6A!1.13!14.02!KAT6A;;chr6:106546731..106546755,+!p5@PRDM1!1.13!12.51!PRDM1;;chrX:106960249..106960260,-!p5@TSC22D3!1.12!19.19!TSC22D3;;chr3:71355163..71355209,-!p5@FOXP1!1.12!16.82!FOXP1;;chr17:38020557..38020572,-!p4@IKZF3!1.12!12.29!IKZF3;;chr7:50344289..50344323,+!p1@IKZF1!1.12!12.29!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.12!12.08!FOXP1;;chr10:3827371..3827386,-!p2@KLF6!1.11!100.05!KLF6;;chr4:103498623..103498650,+!p9@NFKB1!1.11!11.86!NFKB1;;chr14:64971461..64971542,+!p1@ZBTB1!1.10!231.80!ZBTB1;;chr16:79634624..79634642,-!p1@MAF!1.10!46.14!MAF;;chr18:46477458..46477479,-!p4@SMAD7!1.09!11.21!SMAD7;;chr2:97202991..97203043,+!p3@ARID5A!1.09!11.21!ARID5A;;chr19:45504688..45504782,+!p1@RELB!1.08!66.84!RELB;;chr19:18392422..18392440,-!p1@JUND!1.07!1499.26!JUND;;chr2:145275162..145275202,-!p2@ZEB2!1.07!64.04!ZEB2;;chr6:91006575..91006602,-!p2@BACH2!1.06!15.74!BACH2;;chr14:69262947..69262986,-!p3@ZFP36L1!1.06!12.72!ZFP36L1;;chr7:137620650..137620677,-!p3@CREB3L2!1.06!10.57!CREB3L2;;chr8:102218439..102218455,-!p3@ZNF706!1.06!10.35!ZNF706;;chr4:57522513..57522548,-!p4@HOPX!1.06!10.35!HOPX;;chr11:128392085..128392232,-!p1@ETS1!1.05!342.85!ETS1;;chr15:31619326..31619390,+!p2@KLF13!1.05!117.95!KLF13;;chr5:172483347..172483407,+!p1@C5orf41!1.05!77.41!CREBRF;;chr15:31619140..31619152,+!p11@KLF13!1.05!10.13!KLF13;;chr10:35416223..35416234,+!p12@CREM!1.05!10.13!CREM;;chrY:2803415..2803468,+!p1@ZFY!1.05!10.13!ZFY;;chr1:59249732..59249749,-!p2@JUN!1.04!121.18!JUN;;chr13:41593425..41593480,-!p1@ELF1!1.04!64.69!ELF1;;chr22:38597987..38598021,+!p2@MAFF!1.04!62.32!MAFF;;chr19:12721790..12721810,+!p2@ZNF791!1.04!28.03!ZNF791;;chr1:45805693..45805718,+!p3@TOE1!1.04!21.78!TOE1;;chr10:3819310..3819325,-!p5@KLF6!1.04!13.37!KLF6;;chr12:57914286..57914304,-!p1@DDIT3!1.03!354.71!DDIT3;;chr8:67525473..67525518,-!p1@MYBL1!1.03!22.43!MYBL1;;chr11:85375237..85375277,-!p4@CREBZF!1.03!11.21!CREBZF;;chr16:89789271..89789291,+!p5@ZNF276!1.03!9.70!ZNF276;;chr17:45810816..45810838,+!p2@TBX21!1.03!9.70!TBX21;;chr2:174828545..174828644,-!p1@SP3!1.02!147.06!SP3;;chr19:45252008..45252024,+!p2@BCL3!1.02!31.48!BCL3;;chr13:74708029..74708077,-!p2@KLF12!1.02!27.38!KLF12;;chr19:47616992..47617011,-!p4@ZC3H4!1.02!20.48!ZC3H4;;chr16:79634595..79634620,-!p2@MAF!1.02!17.47!MAF;;chr3:101546827..101546847,+!p2@NFKBIZ!1.02!13.58!NFKBIZ;;chr7:50344144..50344157,+!p6@IKZF1!1.02!9.49!IKZF1;;chr10:35484090..35484104,+!p6@CREM!1.02!9.49!CREM;;chr11:13299319..13299424,+!p1@ARNTL!1.01!95.31!ARNTL;;chr9:73028332..73028385,-!p3@KLF9!1.01!32.34!KLF9;;chr7:17338324..17338341,+!p3@AHR!1.01!31.27!AHR;;chr14:64971438..64971450,+!p2@ZBTB1!1.01!21.99!ZBTB1;;chr20:56195525..56195556,-!p2@ZBP1!1.01!9.27!ZBP1;;chr9:3526360..3526421,-!p5@RFX3!1.00!17.03!RFX3;;chr4:109090075..109090095,-!p2@LEF1!1.00!9.06!LEF1;;chr19:16435423..16435484,+!p5@KLF2!1.00!9.06!KLF2;;chr6:151712673..151712709,-!p1@ZBTB2!0.99!51.97!ZBTB2;;chr3:150126904..150126958,+!p7@TSC22D2!0.99!15.74!TSC22D2;;chr5:142782823..142782854,-!p3@NR3C1!0.99!12.72!NR3C1;;chr14:35872494..35872511,-!p5@NFKBIA!0.99!11.64!NFKBIA;;chr2:214017168..214017189,-!p8@IKZF2!0.99!8.84!IKZF2;;chr19:54041603..54041615,+!p10@ZNF331!0.99!8.84!ZNF331;;chr3:5021113..5021180,+!p1@BHLHE40!0.98!614.11!BHLHE40;;chr6:143266297..1432663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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000623;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051 | |ffid_belonging_in_development=CL:0000134,CL:0000051 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 38: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Natural%2520Killer%2520Cells%252c%2520donor2.CNhs11957.11311-117C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Natural%2520Killer%2520Cells%252c%2520donor2.CNhs11957.11311-117C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Natural%2520Killer%2520Cells%252c%2520donor2.CNhs11957.11311-117C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Natural%2520Killer%2520Cells%252c%2520donor2.CNhs11957.11311-117C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Natural%2520Killer%2520Cells%252c%2520donor2.CNhs11957.11311-117C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11311-117C6 | |id=FF:11311-117C6 | ||
|is_a=EFO:0002091;;FF:0000119 | |is_a=EFO:0002091;;FF:0000119 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11957 | |||
|library_id_phase_based=2:CNhs11957 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11311 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10013.GTTTCG.11311 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11311 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10013.GTTTCG.11311 | |||
|name=Natural Killer Cells, donor2 | |name=Natural Killer Cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 46: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11957,LSID836,release011,COMPLETED | |profile_hcage=CNhs11957,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10013,,, | |profile_srnaseq=SRhi10013,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=117 | |rna_box=117 | ||
Line 61: | Line 82: | ||
|rna_tube_id=117C6 | |rna_tube_id=117C6 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10013.GTTTCG | |||
|sample_age=57 | |sample_age=57 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 83: | Line 106: | ||
|top_motifs=RORA:4.15651858328;T:3.70352324958;ATF4:3.66970768154;RFX2..5_RFXANK_RFXAP:3.5481318577;RUNX1..3:3.47038298513;CREB1:3.45525311346;PAX3,7:3.38917284335;ATF5_CREB3:3.33092805291;BPTF:2.98501587596;PITX1..3:2.97364388905;FOX{D1,D2}:2.96592390538;FOXP1:2.91730708309;NFKB1_REL_RELA:2.87506601897;FOXN1:2.51124031305;FOXO1,3,4:2.39132005603;ELF1,2,4:2.3837213114;DMAP1_NCOR{1,2}_SMARC:2.35166157424;ZBTB16:2.33473478236;PAX2:2.2811130744;RFX1:2.24102100516;ETS1,2:2.19189517297;FOX{F1,F2,J1}:2.11397797553;NKX2-1,4:2.0723335581;HMX1:2.05164485722;TBX4,5:2.01643870732;JUN:2.00118169184;TOPORS:1.85916048076;SPI1:1.7585223761;NKX6-1,2:1.73574882005;IKZF2:1.63529606383;TGIF1:1.62188185941;TLX2:1.54026349419;ATF6:1.39349830042;ZNF384:1.28054819895;IRF1,2:1.23189523634;ATF2:1.18648520394;SPIB:1.13334420694;FOX{I1,J2}:1.09760769471;BREu{core}:1.07875190175;HIF1A:1.03888330836;NANOG{mouse}:0.914716526608;LEF1_TCF7_TCF7L1,2:0.885068498108;PPARG:0.86834396739;FOSL2:0.755849156242;SMAD1..7,9:0.70596571432;EGR1..3:0.663321010975;FOS_FOS{B,L1}_JUN{B,D}:0.650264013258;MAFB:0.630982289417;EP300:0.600633504986;AIRE:0.600628617159;MYB:0.594001212882;PAX4:0.572483223935;CDX1,2,4:0.551317492613;HBP1_HMGB_SSRP1_UBTF:0.456044322495;ELK1,4_GABP{A,B1}:0.446250319862;PAX6:0.442571135295;TFDP1:0.381572022578;SREBF1,2:0.367909059392;RXRA_VDR{dimer}:0.34521345814;NFATC1..3:0.335530357783;BACH2:0.328600496937;FOXD3:0.30916545634;RREB1:0.282657881586;SOX2:0.26747947606;NKX3-1:0.25814082924;FOXP3:0.249457002819;FOXL1:0.228536830743;HMGA1,2:0.221083384826;GCM1,2:0.214347283464;STAT2,4,6:0.195854507317;NFIL3:0.18410192986;GATA6:0.183480128925;NFE2:0.143499432271;MYFfamily:0.127509906273;NFE2L1:0.0924848319046;HOX{A6,A7,B6,B7}:0.0889115752303;IRF7:-0.0193834572831;SOX5:-0.0224842294042;AHR_ARNT_ARNT2:-0.0823799675095;NFY{A,B,C}:-0.102939309832;PDX1:-0.159155796531;POU2F1..3:-0.193326923719;HES1:-0.224520198739;EVI1:-0.225561772231;DBP:-0.252688268492;FOXQ1:-0.255776013989;FOXM1:-0.26521706905;NFIX:-0.26747824847;TFAP4:-0.279689208073;NFE2L2:-0.294309985026;E2F1..5:-0.317798271484;SNAI1..3:-0.330861203689;CEBPA,B_DDIT3:-0.335625636665;MTE{core}:-0.349627975912;PBX1:-0.351431953024;NR5A1,2:-0.359556734301;CUX2:-0.37067892758;ZEB1:-0.385609125073;SRF:-0.39701031046;GLI1..3:-0.400019637883;HOXA9_MEIS1:-0.413736319655;MTF1:-0.418926536665;MED-1{core}:-0.436829979538;ZFP161:-0.555242138741;HNF4A_NR2F1,2:-0.56638865527;NRF1:-0.569790702558;STAT5{A,B}:-0.569982868138;SPZ1:-0.572614340063;MYOD1:-0.58448722168;TFAP2B:-0.585253987136;PATZ1:-0.615161902532;HLF:-0.628433433405;REST:-0.683242106167;PRRX1,2:-0.695058821721;NANOG:-0.730366257112;PAX5:-0.7512870846;TFAP2{A,C}:-0.752808176195;RBPJ:-0.777554109645;ALX4:-0.786980258749;ZIC1..3:-0.827519309257;ZBTB6:-0.832006290003;AR:-0.836106440641;LMO2:-0.847187927459;TAL1_TCF{3,4,12}:-0.85211219407;NHLH1,2:-0.853859848886;STAT1,3:-0.859137620624;bHLH_family:-0.898221613912;HNF1A:-0.908652109531;TFCP2:-0.91802017272;XBP1:-0.941301900207;MZF1:-0.945011028782;MAZ:-0.949245696094;ZNF423:-0.967234637754;OCT4_SOX2{dimer}:-1.01428072772;UFEwm:-1.01485789629;CRX:-1.02152258441;NR1H4:-1.02153824151;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.02912951523;RXR{A,B,G}:-1.05007216229;HSF1,2:-1.05010866278;NKX2-2,8:-1.05287699359;YY1:-1.05311195755;SOX{8,9,10}:-1.05626513862;SP1:-1.06590708063;HIC1:-1.06710377981;TEF:-1.09981985923;GATA4:-1.19764071778;POU1F1:-1.20724756815;MEF2{A,B,C,D}:-1.21471946916;FOXA2:-1.23283958302;GFI1:-1.2360710295;ESRRA:-1.24124665879;ALX1:-1.35362062522;HAND1,2:-1.38566521526;ZNF143:-1.39066722938;CDC5L:-1.3914062898;PAX8:-1.41642477211;POU6F1:-1.42189022527;ZNF148:-1.42767132531;SOX17:-1.42969924446;TP53:-1.45484139194;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.46487474224;TBP:-1.46731864321;ARID5B:-1.5066477982;MYBL2:-1.53387993299;HOX{A5,B5}:-1.54678723343;ZNF238:-1.62247196009;LHX3,4:-1.6535159443;XCPE1{core}:-1.65606600463;POU5F1:-1.73349123388;NR6A1:-1.7673186003;GTF2I:-1.79426404188;NKX2-3_NKX2-5:-1.82206607823;ONECUT1,2:-1.82748857802;POU3F1..4:-1.8834677753;GTF2A1,2:-1.88515029679;TEAD1:-1.90488272891;EN1,2:-1.91831591472;GFI1B:-2.08695011236;GZF1:-2.1061156402;TLX1..3_NFIC{dimer}:-2.15773851504;VSX1,2:-2.23330776665;PRDM1:-2.23777275743;ESR1:-2.34897518172;HOX{A4,D4}:-2.36637102338;EBF1:-2.37045995855;NKX3-2:-2.37223378396;KLF4:-2.41535145488;IKZF1:-2.44470329053;ADNP_IRX_SIX_ZHX:-2.82465441058;PAX1,9:-3.42913110453;NR3C1:-3.97627987022 | |top_motifs=RORA:4.15651858328;T:3.70352324958;ATF4:3.66970768154;RFX2..5_RFXANK_RFXAP:3.5481318577;RUNX1..3:3.47038298513;CREB1:3.45525311346;PAX3,7:3.38917284335;ATF5_CREB3:3.33092805291;BPTF:2.98501587596;PITX1..3:2.97364388905;FOX{D1,D2}:2.96592390538;FOXP1:2.91730708309;NFKB1_REL_RELA:2.87506601897;FOXN1:2.51124031305;FOXO1,3,4:2.39132005603;ELF1,2,4:2.3837213114;DMAP1_NCOR{1,2}_SMARC:2.35166157424;ZBTB16:2.33473478236;PAX2:2.2811130744;RFX1:2.24102100516;ETS1,2:2.19189517297;FOX{F1,F2,J1}:2.11397797553;NKX2-1,4:2.0723335581;HMX1:2.05164485722;TBX4,5:2.01643870732;JUN:2.00118169184;TOPORS:1.85916048076;SPI1:1.7585223761;NKX6-1,2:1.73574882005;IKZF2:1.63529606383;TGIF1:1.62188185941;TLX2:1.54026349419;ATF6:1.39349830042;ZNF384:1.28054819895;IRF1,2:1.23189523634;ATF2:1.18648520394;SPIB:1.13334420694;FOX{I1,J2}:1.09760769471;BREu{core}:1.07875190175;HIF1A:1.03888330836;NANOG{mouse}:0.914716526608;LEF1_TCF7_TCF7L1,2:0.885068498108;PPARG:0.86834396739;FOSL2:0.755849156242;SMAD1..7,9:0.70596571432;EGR1..3:0.663321010975;FOS_FOS{B,L1}_JUN{B,D}:0.650264013258;MAFB:0.630982289417;EP300:0.600633504986;AIRE:0.600628617159;MYB:0.594001212882;PAX4:0.572483223935;CDX1,2,4:0.551317492613;HBP1_HMGB_SSRP1_UBTF:0.456044322495;ELK1,4_GABP{A,B1}:0.446250319862;PAX6:0.442571135295;TFDP1:0.381572022578;SREBF1,2:0.367909059392;RXRA_VDR{dimer}:0.34521345814;NFATC1..3:0.335530357783;BACH2:0.328600496937;FOXD3:0.30916545634;RREB1:0.282657881586;SOX2:0.26747947606;NKX3-1:0.25814082924;FOXP3:0.249457002819;FOXL1:0.228536830743;HMGA1,2:0.221083384826;GCM1,2:0.214347283464;STAT2,4,6:0.195854507317;NFIL3:0.18410192986;GATA6:0.183480128925;NFE2:0.143499432271;MYFfamily:0.127509906273;NFE2L1:0.0924848319046;HOX{A6,A7,B6,B7}:0.0889115752303;IRF7:-0.0193834572831;SOX5:-0.0224842294042;AHR_ARNT_ARNT2:-0.0823799675095;NFY{A,B,C}:-0.102939309832;PDX1:-0.159155796531;POU2F1..3:-0.193326923719;HES1:-0.224520198739;EVI1:-0.225561772231;DBP:-0.252688268492;FOXQ1:-0.255776013989;FOXM1:-0.26521706905;NFIX:-0.26747824847;TFAP4:-0.279689208073;NFE2L2:-0.294309985026;E2F1..5:-0.317798271484;SNAI1..3:-0.330861203689;CEBPA,B_DDIT3:-0.335625636665;MTE{core}:-0.349627975912;PBX1:-0.351431953024;NR5A1,2:-0.359556734301;CUX2:-0.37067892758;ZEB1:-0.385609125073;SRF:-0.39701031046;GLI1..3:-0.400019637883;HOXA9_MEIS1:-0.413736319655;MTF1:-0.418926536665;MED-1{core}:-0.436829979538;ZFP161:-0.555242138741;HNF4A_NR2F1,2:-0.56638865527;NRF1:-0.569790702558;STAT5{A,B}:-0.569982868138;SPZ1:-0.572614340063;MYOD1:-0.58448722168;TFAP2B:-0.585253987136;PATZ1:-0.615161902532;HLF:-0.628433433405;REST:-0.683242106167;PRRX1,2:-0.695058821721;NANOG:-0.730366257112;PAX5:-0.7512870846;TFAP2{A,C}:-0.752808176195;RBPJ:-0.777554109645;ALX4:-0.786980258749;ZIC1..3:-0.827519309257;ZBTB6:-0.832006290003;AR:-0.836106440641;LMO2:-0.847187927459;TAL1_TCF{3,4,12}:-0.85211219407;NHLH1,2:-0.853859848886;STAT1,3:-0.859137620624;bHLH_family:-0.898221613912;HNF1A:-0.908652109531;TFCP2:-0.91802017272;XBP1:-0.941301900207;MZF1:-0.945011028782;MAZ:-0.949245696094;ZNF423:-0.967234637754;OCT4_SOX2{dimer}:-1.01428072772;UFEwm:-1.01485789629;CRX:-1.02152258441;NR1H4:-1.02153824151;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.02912951523;RXR{A,B,G}:-1.05007216229;HSF1,2:-1.05010866278;NKX2-2,8:-1.05287699359;YY1:-1.05311195755;SOX{8,9,10}:-1.05626513862;SP1:-1.06590708063;HIC1:-1.06710377981;TEF:-1.09981985923;GATA4:-1.19764071778;POU1F1:-1.20724756815;MEF2{A,B,C,D}:-1.21471946916;FOXA2:-1.23283958302;GFI1:-1.2360710295;ESRRA:-1.24124665879;ALX1:-1.35362062522;HAND1,2:-1.38566521526;ZNF143:-1.39066722938;CDC5L:-1.3914062898;PAX8:-1.41642477211;POU6F1:-1.42189022527;ZNF148:-1.42767132531;SOX17:-1.42969924446;TP53:-1.45484139194;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.46487474224;TBP:-1.46731864321;ARID5B:-1.5066477982;MYBL2:-1.53387993299;HOX{A5,B5}:-1.54678723343;ZNF238:-1.62247196009;LHX3,4:-1.6535159443;XCPE1{core}:-1.65606600463;POU5F1:-1.73349123388;NR6A1:-1.7673186003;GTF2I:-1.79426404188;NKX2-3_NKX2-5:-1.82206607823;ONECUT1,2:-1.82748857802;POU3F1..4:-1.8834677753;GTF2A1,2:-1.88515029679;TEAD1:-1.90488272891;EN1,2:-1.91831591472;GFI1B:-2.08695011236;GZF1:-2.1061156402;TLX1..3_NFIC{dimer}:-2.15773851504;VSX1,2:-2.23330776665;PRDM1:-2.23777275743;ESR1:-2.34897518172;HOX{A4,D4}:-2.36637102338;EBF1:-2.37045995855;NKX3-2:-2.37223378396;KLF4:-2.41535145488;IKZF1:-2.44470329053;ADNP_IRX_SIX_ZHX:-2.82465441058;PAX1,9:-3.42913110453;NR3C1:-3.97627987022 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11311-117C6;search_select_hide=table117:FF:11311-117C6 | |||
}} | }} |
Latest revision as of 16:32, 3 June 2020
Name: | Natural Killer Cells, donor2 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11957 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11957
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11957
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.994 |
10 | 10 | 0.00862 |
100 | 100 | 0.688 |
101 | 101 | 0.341 |
102 | 102 | 0.939 |
103 | 103 | 0.512 |
104 | 104 | 0.791 |
105 | 105 | 0.718 |
106 | 106 | 0.159 |
107 | 107 | 0.0806 |
108 | 108 | 0.613 |
109 | 109 | 0.894 |
11 | 11 | 0.835 |
110 | 110 | 0.417 |
111 | 111 | 0.554 |
112 | 112 | 0.832 |
113 | 113 | 0.178 |
114 | 114 | 0.94 |
115 | 115 | 0.385 |
116 | 116 | 0.175 |
117 | 117 | 0.0075 |
118 | 118 | 0.41 |
119 | 119 | 0.575 |
12 | 12 | 0.651 |
120 | 120 | 0.269 |
121 | 121 | 0.454 |
122 | 122 | 0.889 |
123 | 123 | 4.95687e-6 |
124 | 124 | 0.808 |
125 | 125 | 0.643 |
126 | 126 | 0.684 |
127 | 127 | 0.301 |
128 | 128 | 0.911 |
129 | 129 | 0.182 |
13 | 13 | 0.508 |
130 | 130 | 0.238 |
131 | 131 | 0.405 |
132 | 132 | 0.196 |
133 | 133 | 0.276 |
134 | 134 | 0.771 |
135 | 135 | 0.292 |
136 | 136 | 0.784 |
137 | 137 | 0.0754 |
138 | 138 | 0.842 |
139 | 139 | 0.202 |
14 | 14 | 0.453 |
140 | 140 | 0.737 |
141 | 141 | 0.725 |
142 | 142 | 0.248 |
143 | 143 | 0.0375 |
144 | 144 | 0.936 |
145 | 145 | 0.708 |
146 | 146 | 0.413 |
147 | 147 | 0.0301 |
148 | 148 | 0.415 |
149 | 149 | 0.184 |
15 | 15 | 0.325 |
150 | 150 | 0.975 |
151 | 151 | 0.366 |
152 | 152 | 0.994 |
153 | 153 | 0.483 |
154 | 154 | 0.102 |
155 | 155 | 0.0628 |
156 | 156 | 0.672 |
157 | 157 | 0.773 |
158 | 158 | 0.023 |
159 | 159 | 0.405 |
16 | 16 | 0.209 |
160 | 160 | 0.0524 |
161 | 161 | 0.639 |
162 | 162 | 0.0332 |
163 | 163 | 0.753 |
164 | 164 | 0.0758 |
165 | 165 | 0.766 |
166 | 166 | 0.422 |
167 | 167 | 0.106 |
168 | 168 | 0.504 |
169 | 169 | 0.304 |
17 | 17 | 0.7 |
18 | 18 | 0.725 |
19 | 19 | 0.0676 |
2 | 2 | 0.108 |
20 | 20 | 0.111 |
21 | 21 | 0.896 |
22 | 22 | 0.221 |
23 | 23 | 0.901 |
24 | 24 | 0.455 |
25 | 25 | 0.175 |
26 | 26 | 0.936 |
27 | 27 | 0.422 |
28 | 28 | 0.344 |
29 | 29 | 0.118 |
3 | 3 | 0.669 |
30 | 30 | 0.046 |
31 | 31 | 0.562 |
32 | 32 | 0.0186 |
33 | 33 | 0.503 |
34 | 34 | 0.297 |
35 | 35 | 0.373 |
36 | 36 | 0.114 |
37 | 37 | 0.45 |
38 | 38 | 0.633 |
39 | 39 | 0.519 |
4 | 4 | 0.974 |
40 | 40 | 0.928 |
41 | 41 | 0.159 |
42 | 42 | 0.506 |
43 | 43 | 0.546 |
44 | 44 | 0.597 |
45 | 45 | 0.0982 |
46 | 46 | 0.998 |
47 | 47 | 0.876 |
48 | 48 | 0.923 |
49 | 49 | 0.183 |
5 | 5 | 0.614 |
50 | 50 | 0.44 |
51 | 51 | 0.947 |
52 | 52 | 0.865 |
53 | 53 | 0.224 |
54 | 54 | 0.977 |
55 | 55 | 0.538 |
56 | 56 | 0.798 |
57 | 57 | 0.88 |
58 | 58 | 0.178 |
59 | 59 | 0.19 |
6 | 6 | 0.937 |
60 | 60 | 0.581 |
61 | 61 | 0.309 |
62 | 62 | 0.331 |
63 | 63 | 0.749 |
64 | 64 | 0.912 |
65 | 65 | 0.539 |
66 | 66 | 0.271 |
67 | 67 | 0.44 |
68 | 68 | 0.769 |
69 | 69 | 0.934 |
7 | 7 | 0.686 |
70 | 70 | 0.292 |
71 | 71 | 0.238 |
72 | 72 | 0.441 |
73 | 73 | 0.424 |
74 | 74 | 0.627 |
75 | 75 | 0.0412 |
76 | 76 | 0.0946 |
77 | 77 | 0.00238 |
78 | 78 | 0.859 |
79 | 79 | 0.535 |
8 | 8 | 0.267 |
80 | 80 | 0.086 |
81 | 81 | 0.887 |
82 | 82 | 0.694 |
83 | 83 | 0.787 |
84 | 84 | 0.066 |
85 | 85 | 0.704 |
86 | 86 | 0.0354 |
87 | 87 | 0.976 |
88 | 88 | 0.901 |
89 | 89 | 0.00379 |
9 | 9 | 0.764 |
90 | 90 | 0.911 |
91 | 91 | 0.748 |
92 | 92 | 0.971 |
93 | 93 | 0.834 |
94 | 94 | 0.325 |
95 | 95 | 0.156 |
96 | 96 | 0.837 |
97 | 97 | 0.266 |
98 | 98 | 0.608 |
99 | 99 | 6.69795e-6 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11957
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000623 (natural killer cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000119 (human natural killer cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)