FFCP PHASE1:Hg19::chr15:39888645..39888657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888645..39888657,+ | |||
|coexpression_cluster_id=C142 | |coexpression_cluster_id=C142 | ||
|description=CAGE_peak_at_chr15:39888645..39888657,+ | |description=CAGE_peak_at_chr15:39888645..39888657,+ | ||
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|ontology_enrichment_celltype=CL:0002371!7.33e-18!591;CL:0000144!2.56e-16!625;CL:0000055!4.07e-16!180;CL:0000057!2.51e-14!75;CL:0000548!1.33e-13!679;CL:0000004!1.33e-13!679;CL:0000255!1.33e-13!679;CL:0000012!4.35e-13!682;CL:0000222!1.35e-12!119;CL:0000220!1.60e-11!246;CL:0002321!4.08e-11!248;CL:0002139!1.65e-09!24;CL:0000115!2.64e-09!35;CL:0002078!2.18e-08!44;CL:0002334!3.55e-08!12;CL:0000213!1.04e-07!57;CL:0000215!1.04e-07!57;CL:0000003!2.33e-07!722;CL:0002620!2.64e-07!23;CL:0000063!9.78e-07!578 | |ontology_enrichment_celltype=CL:0002371!7.33e-18!591;CL:0000144!2.56e-16!625;CL:0000055!4.07e-16!180;CL:0000057!2.51e-14!75;CL:0000548!1.33e-13!679;CL:0000004!1.33e-13!679;CL:0000255!1.33e-13!679;CL:0000012!4.35e-13!682;CL:0000222!1.35e-12!119;CL:0000220!1.60e-11!246;CL:0002321!4.08e-11!248;CL:0002139!1.65e-09!24;CL:0000115!2.64e-09!35;CL:0002078!2.18e-08!44;CL:0002334!3.55e-08!12;CL:0000213!1.04e-07!57;CL:0000215!1.04e-07!57;CL:0000003!2.33e-07!722;CL:0002620!2.64e-07!23;CL:0000063!9.78e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.00e-13;24!CL:0000115;3.96e-10;36!CL:0002334;6.57e-09;12!CL:0002620;1.40e-08;23!CL:0000071;6.98e-08;18!CL:0002559;1.74e-07;5!CL:0002138;2.15e-07;6!CL:0000349;4.76e-07;19!CL:0002078;6.75e-07;45!CL:0002537;8.05e-07;5 | |ontology_enrichment_celltype_v019=CL:0002139;5.00e-13;24!CL:0000115;3.96e-10;36!CL:0002334;6.57e-09;12!CL:0002620;1.40e-08;23!CL:0000071;6.98e-08;18!CL:0002559;1.74e-07;5!CL:0002138;2.15e-07;6!CL:0000349;4.76e-07;19!CL:0002078;6.75e-07;45!CL:0002537;8.05e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.14e-17,76;CL:0002139,4.76e-13,24;CL:0000115,1.63e-11,36;CL:0002078,7.59e-10,45;CL:0002334,6.31e-09,12;CL:0002620,1.67e-08,23;CL:0000048,2.97e-08,427;CL:0000222,4.58e-08,121;CL:0000071,6.76e-08,18;CL:0002546,6.76e-08,18;CL:0000723,8.50e-08,433;CL:0002559,1.85e-07,5;CL:0005020,2.11e-07,6;CL:0002138,2.11e-07,6;CL:0005022,2.11e-07,6;CL:0000034,3.24e-07,441;CL:0000213,4.04e-07,58;CL:0000215,4.04e-07,58;CL:0000349,5.51e-07,19;CL:0002537,7.68e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;6.98e-08;18!CL:0005022;2.15e-07;6 | |ontology_enrichment_development_v019=CL:0002546;6.98e-08;18!CL:0005022;2.15e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.68e-07;5!DOID:450;2.68e-07;5!DOID:66;2.68e-07;5!DOID:423;2.68e-07;5!DOID:0080000;2.68e-07;5!DOID:11722;2.68e-07;5 | |ontology_enrichment_disease_v019=DOID:17;2.68e-07;5!DOID:450;2.68e-07;5!DOID:66;2.68e-07;5!DOID:423;2.68e-07;5!DOID:0080000;2.68e-07;5!DOID:11722;2.68e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.68e-07,5;DOID:450,1.68e-07,5;DOID:66,1.68e-07,5;DOID:423,1.68e-07,5;DOID:0080000,1.68e-07,5;DOID:11722,1.68e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.16e-14!79;UBERON:0007798!3.16e-14!79;UBERON:0004872!4.63e-14!84;UBERON:0000055!1.05e-13!69;UBERON:0001981!2.06e-12!60;UBERON:0007500!2.06e-12!60;UBERON:0004537!2.06e-12!60;UBERON:0006965!2.06e-12!60;UBERON:0004535!1.21e-10!110;UBERON:0003914!2.30e-10!118;UBERON:0003102!4.21e-10!95;UBERON:0001637!6.47e-10!42;UBERON:0003509!6.47e-10!42;UBERON:0004572!6.47e-10!42;UBERON:0001009!9.34e-10!113;UBERON:0000468!2.04e-08!659;UBERON:0000486!3.04e-08!82;UBERON:0000467!4.37e-08!625;UBERON:0000480!5.92e-08!626;UBERON:0000914!6.30e-08!83;UBERON:0002329!6.30e-08!83;UBERON:0003077!6.30e-08!83;UBERON:0003059!6.30e-08!83;UBERON:0007282!6.30e-08!83;UBERON:0009618!6.30e-08!83;UBERON:0007285!6.30e-08!83;UBERON:0005256!7.07e-08!143;UBERON:0000490!7.48e-08!138;UBERON:0002199!8.79e-08!45;UBERON:0002416!8.79e-08!45;UBERON:0002097!1.10e-07!40;UBERON:0004923!1.86e-07!57;UBERON:0002100!2.98e-07!216 | |ontology_enrichment_uberon=UBERON:0002049!3.16e-14!79;UBERON:0007798!3.16e-14!79;UBERON:0004872!4.63e-14!84;UBERON:0000055!1.05e-13!69;UBERON:0001981!2.06e-12!60;UBERON:0007500!2.06e-12!60;UBERON:0004537!2.06e-12!60;UBERON:0006965!2.06e-12!60;UBERON:0004535!1.21e-10!110;UBERON:0003914!2.30e-10!118;UBERON:0003102!4.21e-10!95;UBERON:0001637!6.47e-10!42;UBERON:0003509!6.47e-10!42;UBERON:0004572!6.47e-10!42;UBERON:0001009!9.34e-10!113;UBERON:0000468!2.04e-08!659;UBERON:0000486!3.04e-08!82;UBERON:0000467!4.37e-08!625;UBERON:0000480!5.92e-08!626;UBERON:0000914!6.30e-08!83;UBERON:0002329!6.30e-08!83;UBERON:0003077!6.30e-08!83;UBERON:0003059!6.30e-08!83;UBERON:0007282!6.30e-08!83;UBERON:0009618!6.30e-08!83;UBERON:0007285!6.30e-08!83;UBERON:0005256!7.07e-08!143;UBERON:0000490!7.48e-08!138;UBERON:0002199!8.79e-08!45;UBERON:0002416!8.79e-08!45;UBERON:0002097!1.10e-07!40;UBERON:0004923!1.86e-07!57;UBERON:0002100!2.98e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.87e-11;10!UBERON:0000158;5.87e-11;10!UBERON:0001637;1.60e-09;42!UBERON:0003509;1.60e-09;42!UBERON:0004572;1.60e-09;42!UBERON:0003688;1.76e-09;6!UBERON:0002358;1.76e-09;6!UBERON:0003684;1.76e-09;6!UBERON:0001178;1.76e-09;6!UBERON:0000305;1.22e-08;7!UBERON:0007500;1.53e-08;56!UBERON:0001981;1.53e-08;56!UBERON:0004537;1.53e-08;56!UBERON:0000055;1.83e-08;65!UBERON:0002097;5.44e-08;41!UBERON:0004638;6.98e-08;18!UBERON:0001986;6.98e-08;18!UBERON:0004852;6.98e-08;18!UBERON:0004457;1.40e-07;9!UBERON:0000042;1.40e-07;9!UBERON:0002073;1.74e-07;5!UBERON:0000487;2.77e-07;22!UBERON:0006914;5.03e-07;25!UBERON:0002049;6.52e-07;75!UBERON:0007798;6.52e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0005631;5.87e-11;10!UBERON:0000158;5.87e-11;10!UBERON:0001637;1.60e-09;42!UBERON:0003509;1.60e-09;42!UBERON:0004572;1.60e-09;42!UBERON:0003688;1.76e-09;6!UBERON:0002358;1.76e-09;6!UBERON:0003684;1.76e-09;6!UBERON:0001178;1.76e-09;6!UBERON:0000305;1.22e-08;7!UBERON:0007500;1.53e-08;56!UBERON:0001981;1.53e-08;56!UBERON:0004537;1.53e-08;56!UBERON:0000055;1.83e-08;65!UBERON:0002097;5.44e-08;41!UBERON:0004638;6.98e-08;18!UBERON:0001986;6.98e-08;18!UBERON:0004852;6.98e-08;18!UBERON:0004457;1.40e-07;9!UBERON:0000042;1.40e-07;9!UBERON:0002073;1.74e-07;5!UBERON:0000487;2.77e-07;22!UBERON:0006914;5.03e-07;25!UBERON:0002049;6.52e-07;75!UBERON:0007798;6.52e-07;75 | ||
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| ||
|short_description=p@chr15:39888645..39888657,+ | |short_description=p@chr15:39888645..39888657,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888645..39888657, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888645..39888657, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.14e-17 | 76 |
endothelial cell of vascular tree | 4.76e-13 | 24 |
endothelial cell | 1.63e-11 | 36 |
meso-epithelial cell | 7.59e-10 | 45 |
preadipocyte | 6.31e-09 | 12 |
skin fibroblast | 1.67e-08 | 23 |
multi fate stem cell | 2.97e-08 | 427 |
mesodermal cell | 4.58e-08 | 121 |
blood vessel endothelial cell | 6.76e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.76e-08 | 18 |
somatic stem cell | 8.50e-08 | 433 |
hair follicle cell | 1.85e-07 | 5 |
lymphangioblast | 2.11e-07 | 6 |
endothelial cell of lymphatic vessel | 2.11e-07 | 6 |
vascular lymphangioblast | 2.11e-07 | 6 |
stem cell | 3.24e-07 | 441 |
lining cell | 4.04e-07 | 58 |
barrier cell | 4.04e-07 | 58 |
extraembryonic cell | 5.51e-07 | 19 |
amnion mesenchymal stem cell | 7.68e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.68e-07 | 5 |
myotonic disease | 1.68e-07 | 5 |
muscle tissue disease | 1.68e-07 | 5 |
myopathy | 1.68e-07 | 5 |
muscular disease | 1.68e-07 | 5 |
myotonic dystrophy | 1.68e-07 | 5 |