FFCP PHASE1:Hg19::chr11:8816375..8816402,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQA9 | |UniProt=E9PQA9 | ||
|association_with_transcript=0bp_to_ENST00000530580_5end | |association_with_transcript=0bp_to_ENST00000530580_5end | ||
|cluster_id=chr11:8816375..8816402,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_12_at_ST5_5end | |description=CAGE_peak_12_at_ST5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!3.60e-16!12;CL:0000417!3.60e-16!12;CL:0000668!3.60e-16!12;CL:0000414!3.60e-16!12;CL:0000412!3.60e-16!12;CL:0000182!3.60e-16!12;CL:0000223!3.70e-07!59 | |ontology_enrichment_celltype=CL:0000181!3.60e-16!12;CL:0000417!3.60e-16!12;CL:0000668!3.60e-16!12;CL:0000414!3.60e-16!12;CL:0000412!3.60e-16!12;CL:0000182!3.60e-16!12;CL:0000223!3.70e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.39e-33;12!CL:0002563;2.76e-07;4 | |ontology_enrichment_celltype_v019=CL:0000182;8.39e-33;12!CL:0002563;2.76e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.93e-33,12;CL:0000223,2.30e-13,58;CL:0002563,2.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.81e-37;13!UBERON:0004161;1.95e-35;11!UBERON:0003104;1.49e-14;31!UBERON:0001041;3.04e-12;30!CL:0000223;8.83e-09;58!UBERON:0006595;1.61e-08;86!UBERON:0006242;1.85e-07;1!UBERON:0001045;2.62e-07;1 | |ontology_enrichment_development_v019=UBERON:0009497;1.81e-37;13!UBERON:0004161;1.95e-35;11!UBERON:0003104;1.49e-14;31!UBERON:0001041;3.04e-12;30!CL:0000223;8.83e-09;58!UBERON:0006595;1.61e-08;86!UBERON:0006242;1.85e-07;1!UBERON:0001045;2.62e-07;1 | ||
|ontology_enrichment_disease=DOID:3119!3.17e-07!14;DOID:3493!6.30e-07!2 | |ontology_enrichment_disease=DOID:3119!3.17e-07!14;DOID:3493!6.30e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.20e-18!25;UBERON:0000015!1.20e-18!25;UBERON:0002423!1.20e-18!25;UBERON:0006235!1.20e-18!25;UBERON:0004161!1.20e-18!25;UBERON:0009854!1.16e-17!23;UBERON:0005409!1.05e-15!35;UBERON:0008835!1.26e-15!22;UBERON:0003894!1.26e-15!22;UBERON:0002107!2.69e-15!19;UBERON:0006925!2.69e-15!19;UBERON:0008836!2.69e-15!19;UBERON:0009856!2.77e-15!26;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0007499!1.95e-13!25;UBERON:0005057!1.35e-12!26;UBERON:0001007!5.50e-12!155;UBERON:0001555!5.50e-12!155;UBERON:0007026!5.50e-12!155;UBERON:0005172!7.67e-12!55;UBERON:0005173!7.67e-12!55;UBERON:0000160!2.71e-11!27;UBERON:0004119!3.43e-11!169;UBERON:0000925!3.43e-11!169;UBERON:0006595!3.43e-11!169;UBERON:0003929!3.75e-11!54;UBERON:0002417!2.88e-10!61;UBERON:0000916!2.88e-10!61;UBERON:0000059!1.41e-09!11;UBERON:0002368!8.53e-09!35;UBERON:0002365!1.62e-08!31;UBERON:0002330!1.62e-08!31;UBERON:0001155!1.62e-08!9;UBERON:0000077!2.40e-08!130;UBERON:0000949!1.25e-07!45;UBERON:0000466!1.33e-07!126;UBERON:0005177!3.28e-07!107;UBERON:0005911!5.67e-07!82;UBERON:0007023!7.79e-07!115 | |ontology_enrichment_uberon=UBERON:0009497!1.20e-18!25;UBERON:0000015!1.20e-18!25;UBERON:0002423!1.20e-18!25;UBERON:0006235!1.20e-18!25;UBERON:0004161!1.20e-18!25;UBERON:0009854!1.16e-17!23;UBERON:0005409!1.05e-15!35;UBERON:0008835!1.26e-15!22;UBERON:0003894!1.26e-15!22;UBERON:0002107!2.69e-15!19;UBERON:0006925!2.69e-15!19;UBERON:0008836!2.69e-15!19;UBERON:0009856!2.77e-15!26;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0007499!1.95e-13!25;UBERON:0005057!1.35e-12!26;UBERON:0001007!5.50e-12!155;UBERON:0001555!5.50e-12!155;UBERON:0007026!5.50e-12!155;UBERON:0005172!7.67e-12!55;UBERON:0005173!7.67e-12!55;UBERON:0000160!2.71e-11!27;UBERON:0004119!3.43e-11!169;UBERON:0000925!3.43e-11!169;UBERON:0006595!3.43e-11!169;UBERON:0003929!3.75e-11!54;UBERON:0002417!2.88e-10!61;UBERON:0000916!2.88e-10!61;UBERON:0000059!1.41e-09!11;UBERON:0002368!8.53e-09!35;UBERON:0002365!1.62e-08!31;UBERON:0002330!1.62e-08!31;UBERON:0001155!1.62e-08!9;UBERON:0000077!2.40e-08!130;UBERON:0000949!1.25e-07!45;UBERON:0000466!1.33e-07!126;UBERON:0005177!3.28e-07!107;UBERON:0005911!5.67e-07!82;UBERON:0007023!7.79e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;3.03e-34;25!UBERON:0002107;5.09e-32;19!UBERON:0006925;5.09e-32;19!UBERON:0005409;1.63e-30;22!UBERON:0000160;2.38e-26;17!UBERON:0002365;1.64e-18;31!UBERON:0002330;1.64e-18;31!UBERON:0004921;5.52e-18;33!UBERON:0001155;8.06e-17;9!UBERON:0002368;4.28e-16;33!UBERON:0001007;3.68e-14;81!UBERON:0000059;9.78e-14;11!UBERON:0000949;7.23e-12;43!UBERON:0002108;7.45e-12;4!UBERON:0005172;5.34e-08;52!UBERON:0005173;5.34e-08;52!UBERON:0001154;2.62e-07;1!UBERON:0001153;2.62e-07;1!UBERON:0009854;2.62e-07;1!UBERON:0001242;2.76e-07;4!UBERON:0001262;2.76e-07;4!UBERON:0004786;2.76e-07;4!UBERON:0004808;2.76e-07;4!UBERON:0001277;2.76e-07;4!UBERON:0002530;5.41e-07;57!UBERON:0001555;5.79e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0002423;3.03e-34;25!UBERON:0002107;5.09e-32;19!UBERON:0006925;5.09e-32;19!UBERON:0005409;1.63e-30;22!UBERON:0000160;2.38e-26;17!UBERON:0002365;1.64e-18;31!UBERON:0002330;1.64e-18;31!UBERON:0004921;5.52e-18;33!UBERON:0001155;8.06e-17;9!UBERON:0002368;4.28e-16;33!UBERON:0001007;3.68e-14;81!UBERON:0000059;9.78e-14;11!UBERON:0000949;7.23e-12;43!UBERON:0002108;7.45e-12;4!UBERON:0005172;5.34e-08;52!UBERON:0005173;5.34e-08;52!UBERON:0001154;2.62e-07;1!UBERON:0001153;2.62e-07;1!UBERON:0009854;2.62e-07;1!UBERON:0001242;2.76e-07;4!UBERON:0001262;2.76e-07;4!UBERON:0004786;2.76e-07;4!UBERON:0004808;2.76e-07;4!UBERON:0001277;2.76e-07;4!UBERON:0002530;5.41e-07;57!UBERON:0001555;5.79e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.76e-37,23;UBERON:0009497,3.36e-34,25;UBERON:0000015,3.36e-34,25;UBERON:0002423,3.36e-34,25;UBERON:0006235,3.36e-34,25;UBERON:0004161,3.36e-34,25;UBERON:0008835,5.59e-33,22;UBERON:0003894,5.59e-33,22;UBERON:0009856,1.01e-32,26;UBERON:0002107,6.00e-32,19;UBERON:0006925,6.00e-32,19;UBERON:0008836,6.00e-32,19;UBERON:0007499,8.82e-29,25;UBERON:0005409,7.91e-27,25;UBERON:0000160,2.04e-26,17;UBERON:0004921,2.44e-23,118;UBERON:0003929,2.51e-23,54;UBERON:0001007,5.01e-20,145;UBERON:0001555,5.01e-20,145;UBERON:0007026,5.01e-20,145;UBERON:0002365,6.61e-19,31;UBERON:0002330,6.61e-19,31;UBERON:0004119,1.02e-17,160;UBERON:0000925,1.02e-17,160;UBERON:0006595,1.02e-17,160;UBERON:0001155,8.20e-17,9;UBERON:0002368,1.52e-16,35;UBERON:0000949,3.65e-15,45;UBERON:0005911,2.54e-14,82;UBERON:0000059,9.91e-14,11;UBERON:0005172,3.06e-12,54;UBERON:0005173,3.06e-12,54;UBERON:0002108,6.30e-12,4;UBERON:0011216,3.43e-11,223;UBERON:0002530,4.53e-11,59;UBERON:0002417,8.14e-11,60;UBERON:0000916,8.14e-11,60;UBERON:0001041,8.94e-10,87;UBERON:0001242,2.63e-07,4;UBERON:0001262,2.63e-07,4;UBERON:0004786,2.63e-07,4;UBERON:0004808,2.63e-07,4;UBERON:0001277,2.63e-07,4;UBERON:0001154,2.98e-07,1;UBERON:0001153,2.98e-07,1;UBERON:0001045,2.98e-07,1;UBERON:0005177,8.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,11.7939266001315,9.45263850690247,0,6.76436411987125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07609688284813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,7.93415789687461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37879826913334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,2.43282702530686,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.10513566212459,6.55025144421118,0,0.123084805461069,0,0,1.79021174675609,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80600442875399,0,2.98578579323551,3.00755719311353,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,2.13452994739353,0,1.72908500584927,0,6.00582492516876,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.446342914883745,0.268733889946905,0,1.16495949527454,4.49064139151175,5.10978321963232,6.74035438541849,1.08270229666224,0.169346664131569,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1379697595343,9.27548222385549,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47059807863165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.196300467230486,2.8041122745922,0,0,0,0,0,0,0,0,0,0,6.86850007160707,1.74847648403166,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,8.03370027071169,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,11.7939266001315,9.45263850690247,0,6.76436411987125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07609688284813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,7.93415789687461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37879826913334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,2.43282702530686,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.10513566212459,6.55025144421118,0,0.123084805461069,0,0,1.79021174675609,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80600442875399,0,2.98578579323551,3.00755719311353,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,2.13452994739353,0,1.72908500584927,0,6.00582492516876,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.446342914883745,0.268733889946905,0,1.16495949527454,4.49064139151175,5.10978321963232,6.74035438541849,1.08270229666224,0.169346664131569,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1379697595343,9.27548222385549,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47059807863165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.196300467230486,2.8041122745922,0,0,0,0,0,0,0,0,0,0,6.86850007160707,1.74847648403166,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,8.03370027071169,0,0,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@ST5 | |short_description=p12@ST5 | ||
}} | }} |
Latest revision as of 23:50, 24 September 2015
Short description: | p12@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ST5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000530580_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PQA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.93e-33 | 12 |
endodermal cell | 2.30e-13 | 58 |
intestinal epithelial cell | 2.63e-07 | 4 |