FFCP PHASE1:Hg19::chr7:45928079..45928095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3484 | |EntrezGene=3484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5469 | |HGNC=5469 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6H2 | |UniProt=C9J6H2 | ||
|association_with_transcript=0bp_to_ENST00000468955_5end | |association_with_transcript=0bp_to_ENST00000468955_5end | ||
|cluster_id=chr7:45928079..45928095,+ | |||
|coexpression_cluster_id=C1998 | |coexpression_cluster_id=C1998 | ||
|description=CAGE_peak_1_at_IGFBP1_5end | |description=CAGE_peak_1_at_IGFBP1_5end | ||
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|ontology_enrichment_celltype=CL:1000449!1.02e-10!16;CL:1000497!2.53e-10!18;CL:0002518!2.53e-10!18;CL:1000507!2.05e-09!12;CL:1000494!2.05e-09!12;CL:0002681!1.83e-08!13;CL:0002584!1.83e-08!13 | |ontology_enrichment_celltype=CL:1000449!1.02e-10!16;CL:1000497!2.53e-10!18;CL:0002518!2.53e-10!18;CL:1000507!2.05e-09!12;CL:1000494!2.05e-09!12;CL:0002681!1.83e-08!13;CL:0002584!1.83e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.62e-16;15!CL:1000507;1.01e-15;10!CL:1000494;1.01e-15;10!CL:1000497;3.71e-14;17!CL:0002518;3.71e-14;17!CL:0002681;9.51e-13;12!CL:0002584;9.51e-13;12!CL:0000182;1.49e-09;12!CL:0000327;1.13e-07;15!CL:0000669;1.29e-07;4!CL:0000499;5.00e-07;28 | |ontology_enrichment_celltype_v019=CL:1000449;1.62e-16;15!CL:1000507;1.01e-15;10!CL:1000494;1.01e-15;10!CL:1000497;3.71e-14;17!CL:0002518;3.71e-14;17!CL:0002681;9.51e-13;12!CL:0002584;9.51e-13;12!CL:0000182;1.49e-09;12!CL:0000327;1.13e-07;15!CL:0000669;1.29e-07;4!CL:0000499;5.00e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.86e-16,15;CL:1000507,1.16e-15,10;CL:1000494,1.16e-15,10;CL:1000497,4.18e-14,17;CL:0002518,4.18e-14,17;CL:0002681,1.01e-12,12;CL:0002584,1.01e-12,12;CL:0000182,1.53e-09,12;CL:0000066,9.59e-08,253;CL:0000327,1.08e-07,15;CL:0000669,1.29e-07,4;CL:0000499,4.73e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.58e-08;13 | |ontology_enrichment_development_v019=UBERON:0009497;2.58e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:299;1.02e-07;25 | |ontology_enrichment_disease_v019=DOID:299;1.02e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,8.47e-08,25;DOID:305,5.16e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.70e-11!347;UBERON:0000466!3.85e-11!126;UBERON:0006555!5.20e-11!17;UBERON:0005103!5.20e-11!17;UBERON:0000083!5.20e-11!17;UBERON:0009201!5.20e-11!17;UBERON:0004819!5.20e-11!17;UBERON:0006553!5.20e-11!17;UBERON:0003074!5.20e-11!17;UBERON:0003060!5.20e-11!17;UBERON:0005172!7.15e-11!55;UBERON:0005173!7.15e-11!55;UBERON:0004211!1.02e-10!16;UBERON:0001285!1.02e-10!16;UBERON:0007684!1.02e-10!16;UBERON:0003220!1.02e-10!16;UBERON:0004208!1.02e-10!16;UBERON:0000477!1.07e-10!286;UBERON:0003886!2.47e-10!63;UBERON:0003104!3.30e-10!238;UBERON:0009142!3.30e-10!238;UBERON:0000080!4.10e-10!18;UBERON:0002120!4.10e-10!18;UBERON:0004875!4.10e-10!18;UBERON:0005721!4.10e-10!18;UBERON:0005754!4.10e-10!18;UBERON:0007297!4.10e-10!18;UBERON:0005177!5.60e-10!107;UBERON:0000058!9.19e-10!26;UBERON:0009773!2.05e-09!12;UBERON:0001231!2.05e-09!12;UBERON:0004810!2.05e-09!12;UBERON:0002417!2.23e-09!61;UBERON:0000916!2.23e-09!61;UBERON:0003887!2.76e-09!21;UBERON:0003914!4.08e-09!118;UBERON:0002553!6.10e-09!70;UBERON:0004876!1.32e-08!20;UBERON:0001225!1.83e-08!13;UBERON:0008987!1.83e-08!13;UBERON:0001041!2.47e-08!98;UBERON:0000025!2.47e-08!194;UBERON:0001048!3.89e-08!168;UBERON:0009854!4.85e-08!23;UBERON:0000489!6.05e-08!32;UBERON:0009497!7.90e-08!25;UBERON:0000015!7.90e-08!25;UBERON:0002423!7.90e-08!25;UBERON:0006235!7.90e-08!25;UBERON:0004161!7.90e-08!25;UBERON:0002113!8.32e-08!27;UBERON:0003918!8.32e-08!27;UBERON:0005095!8.32e-08!27;UBERON:0007687!8.32e-08!27;UBERON:0008835!1.14e-07!22;UBERON:0003894!1.14e-07!22;UBERON:0001737!1.39e-07!9;UBERON:0000077!1.44e-07!130;UBERON:0000119!1.95e-07!312;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0000353!5.75e-07!17;UBERON:0003103!5.93e-07!69 | |ontology_enrichment_uberon=UBERON:0000481!3.70e-11!347;UBERON:0000466!3.85e-11!126;UBERON:0006555!5.20e-11!17;UBERON:0005103!5.20e-11!17;UBERON:0000083!5.20e-11!17;UBERON:0009201!5.20e-11!17;UBERON:0004819!5.20e-11!17;UBERON:0006553!5.20e-11!17;UBERON:0003074!5.20e-11!17;UBERON:0003060!5.20e-11!17;UBERON:0005172!7.15e-11!55;UBERON:0005173!7.15e-11!55;UBERON:0004211!1.02e-10!16;UBERON:0001285!1.02e-10!16;UBERON:0007684!1.02e-10!16;UBERON:0003220!1.02e-10!16;UBERON:0004208!1.02e-10!16;UBERON:0000477!1.07e-10!286;UBERON:0003886!2.47e-10!63;UBERON:0003104!3.30e-10!238;UBERON:0009142!3.30e-10!238;UBERON:0000080!4.10e-10!18;UBERON:0002120!4.10e-10!18;UBERON:0004875!4.10e-10!18;UBERON:0005721!4.10e-10!18;UBERON:0005754!4.10e-10!18;UBERON:0007297!4.10e-10!18;UBERON:0005177!5.60e-10!107;UBERON:0000058!9.19e-10!26;UBERON:0009773!2.05e-09!12;UBERON:0001231!2.05e-09!12;UBERON:0004810!2.05e-09!12;UBERON:0002417!2.23e-09!61;UBERON:0000916!2.23e-09!61;UBERON:0003887!2.76e-09!21;UBERON:0003914!4.08e-09!118;UBERON:0002553!6.10e-09!70;UBERON:0004876!1.32e-08!20;UBERON:0001225!1.83e-08!13;UBERON:0008987!1.83e-08!13;UBERON:0001041!2.47e-08!98;UBERON:0000025!2.47e-08!194;UBERON:0001048!3.89e-08!168;UBERON:0009854!4.85e-08!23;UBERON:0000489!6.05e-08!32;UBERON:0009497!7.90e-08!25;UBERON:0000015!7.90e-08!25;UBERON:0002423!7.90e-08!25;UBERON:0006235!7.90e-08!25;UBERON:0004161!7.90e-08!25;UBERON:0002113!8.32e-08!27;UBERON:0003918!8.32e-08!27;UBERON:0005095!8.32e-08!27;UBERON:0007687!8.32e-08!27;UBERON:0008835!1.14e-07!22;UBERON:0003894!1.14e-07!22;UBERON:0001737!1.39e-07!9;UBERON:0000077!1.44e-07!130;UBERON:0000119!1.95e-07!312;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0000353!5.75e-07!17;UBERON:0003103!5.93e-07!69 | ||
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| ||
|short_description=p1@IGFBP1 | |short_description=p1@IGFBP1 | ||
}} | }} |
Latest revision as of 19:05, 18 September 2015
Short description: | p1@IGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFBP1_5end |
Coexpression cluster: | C1998_liver_chorionic_placenta_tubular_Hepatocyte_lung_hepatocellular |
Association with transcript: | 0bp_to_ENST00000468955_5end |
EntrezGene: | IGFBP1 |
HGNC: | 5469 |
UniProt: | C9J6H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.86e-16 | 15 |
kidney tubule cell | 1.16e-15 | 10 |
nephron tubule epithelial cell | 1.16e-15 | 10 |
kidney cell | 4.18e-14 | 17 |
kidney epithelial cell | 4.18e-14 | 17 |
kidney cortical cell | 1.01e-12 | 12 |
renal cortical epithelial cell | 1.01e-12 | 12 |
hepatocyte | 1.53e-09 | 12 |
epithelial cell | 9.59e-08 | 253 |
extracellular matrix secreting cell | 1.08e-07 | 15 |
pericyte cell | 1.29e-07 | 4 |
stromal cell | 4.73e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.47e-08 | 25 |
carcinoma | 5.16e-07 | 106 |