FFCP PHASE1:Hg19::chr7:100609627..100609654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=287bp_to_ENST00000480291_5end | |association_with_transcript=287bp_to_ENST00000480291_5end | ||
|cluster_id=chr7:100609627..100609654,+ | |||
|coexpression_cluster_id=C1459 | |coexpression_cluster_id=C1459 | ||
|description=CAGE_peak_3_at_MUC3A_5end,CAGE_peak_3_at_MUC3B_5end | |description=CAGE_peak_3_at_MUC3A_5end,CAGE_peak_3_at_MUC3B_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.42e-10!254;CL:0000039!1.27e-09!7;CL:0000586!1.27e-09!7;CL:0002322!2.26e-07!5 | |ontology_enrichment_celltype=CL:0000066!2.42e-10!254;CL:0000039!1.27e-09!7;CL:0000586!1.27e-09!7;CL:0002322!2.26e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.44e-15;7!CL:0000586;3.44e-15;7!CL:0002322;9.20e-15;5 | |ontology_enrichment_celltype_v019=CL:0000039;3.44e-15;7!CL:0000586;3.44e-15;7!CL:0002322;9.20e-15;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.85e-15,7;CL:0000586,2.85e-15,7;CL:0002322,8.83e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.54e-10;3!UBERON:0003353;9.54e-10;3!UBERON:0009117;3.64e-07;10!UBERON:0005564;3.64e-07;10 | |ontology_enrichment_development_v019=UBERON:0009847;9.54e-10;3!UBERON:0003353;9.54e-10;3!UBERON:0009117;3.64e-07;10!UBERON:0005564;3.64e-07;10 | ||
|ontology_enrichment_disease=DOID:305!6.15e-21!106;DOID:0050687!6.95e-20!143;DOID:14566!8.42e-13!239;DOID:162!1.51e-12!235;DOID:299!1.22e-11!25 | |ontology_enrichment_disease=DOID:305!6.15e-21!106;DOID:0050687!6.95e-20!143;DOID:14566!8.42e-13!239;DOID:162!1.51e-12!235;DOID:299!1.22e-11!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.98e-12,106;DOID:0050687,6.73e-12,143;DOID:162,3.53e-07,235;DOID:14566,7.26e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.86e-11!35;UBERON:0000160!1.60e-10!27;UBERON:0004921!6.94e-10!129;UBERON:0004185!6.94e-10!129;UBERON:0004119!1.10e-08!169;UBERON:0000925!1.10e-08!169;UBERON:0006595!1.10e-08!169;UBERON:0001007!1.26e-08!155;UBERON:0001555!1.26e-08!155;UBERON:0007026!1.26e-08!155;UBERON:0001737!1.06e-07!9;UBERON:0000077!6.92e-07!130;UBERON:0001046!9.09e-07!19 | |ontology_enrichment_uberon=UBERON:0005409!1.86e-11!35;UBERON:0000160!1.60e-10!27;UBERON:0004921!6.94e-10!129;UBERON:0004185!6.94e-10!129;UBERON:0004119!1.10e-08!169;UBERON:0000925!1.10e-08!169;UBERON:0006595!1.10e-08!169;UBERON:0001007!1.26e-08!155;UBERON:0001555!1.26e-08!155;UBERON:0007026!1.26e-08!155;UBERON:0001737!1.06e-07!9;UBERON:0000077!6.92e-07!130;UBERON:0001046!9.09e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.31e-20;22!UBERON:0000160;1.90e-19;17!UBERON:0000059;9.98e-14;11!UBERON:0004921;4.90e-13;33!UBERON:0004907;1.66e-10;5!UBERON:0003101;3.24e-09;22!UBERON:0000079;3.24e-09;22!UBERON:0001155;6.47e-09;9!UBERON:0000922;8.38e-09;49!UBERON:0001052;1.08e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005409;1.31e-20;22!UBERON:0000160;1.90e-19;17!UBERON:0000059;9.98e-14;11!UBERON:0004921;4.90e-13;33!UBERON:0004907;1.66e-10;5!UBERON:0003101;3.24e-09;22!UBERON:0000079;3.24e-09;22!UBERON:0001155;6.47e-09;9!UBERON:0000922;8.38e-09;49!UBERON:0001052;1.08e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-19,17;UBERON:0005409,6.92e-18,25;UBERON:0000059,9.63e-14,11;UBERON:0001046,1.87e-11,19;UBERON:0004907,1.58e-10,5;UBERON:0003101,3.67e-09,22;UBERON:0000079,3.67e-09,22;UBERON:0001155,6.02e-09,9;UBERON:0004921,1.66e-08,118;UBERON:0001007,4.40e-08,145;UBERON:0001555,4.40e-08,145;UBERON:0007026,4.40e-08,145;UBERON:0001052,1.05e-07,4;UBERON:0004119,9.29e-07,160;UBERON:0000925,9.29e-07,160;UBERON:0006595,9.29e-07,160 | |||
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| ||
|short_description=p3@MUC3A,p3@MUC3B | |short_description=p3@MUC3A,p3@MUC3B | ||
}} | }} |
Latest revision as of 15:17, 24 September 2015
Short description: | p3@MUC3A, p3@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MUC3A_5end, CAGE_peak_3_at_MUC3B_5end |
Coexpression cluster: | C1459_rectum_colon_amniotic_Intestinal_small_chorionic_pancreatic |
Association with transcript: | 287bp_to_ENST00000480291_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.85e-15 | 7 |
germ cell | 2.85e-15 | 7 |
embryonic stem cell | 8.83e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-19 | 17 |
gastrointestinal system | 6.92e-18 | 25 |
large intestine | 9.63e-14 | 11 |
hindgut | 1.87e-11 | 19 |
lower digestive tract | 1.58e-10 | 5 |
male organism | 3.67e-09 | 22 |
male reproductive system | 3.67e-09 | 22 |
colon | 6.02e-09 | 9 |
subdivision of digestive tract | 1.66e-08 | 118 |
digestive system | 4.40e-08 | 145 |
digestive tract | 4.40e-08 | 145 |
primitive gut | 4.40e-08 | 145 |
rectum | 1.05e-07 | 4 |
endoderm-derived structure | 9.29e-07 | 160 |
endoderm | 9.29e-07 | 160 |
presumptive endoderm | 9.29e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.98e-12 | 106 |
cell type cancer | 6.73e-12 | 143 |
cancer | 3.53e-07 | 235 |
disease of cellular proliferation | 7.26e-07 | 239 |