FFCP PHASE1:Hg19::chr11:41481144..41481215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57689 | |EntrezGene=57689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29317 | |HGNC=29317 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534577_5end | |association_with_transcript=0bp_to_ENST00000534577_5end | ||
|cluster_id=chr11:41481144..41481215,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_LRRC4C_5end | |description=CAGE_peak_1_at_LRRC4C_5end | ||
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|ontology_enrichment_celltype=CL:0000047!7.05e-11!8;CL:0000540!2.82e-08!6;CL:0000031!2.82e-08!6;CL:0000404!2.82e-08!6;CL:0002319!1.05e-07!25 | |ontology_enrichment_celltype=CL:0000047!7.05e-11!8;CL:0000540!2.82e-08!6;CL:0000031!2.82e-08!6;CL:0000404!2.82e-08!6;CL:0002319!1.05e-07!25 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.57e-20;82!UBERON:0006241;6.51e-10;3!UBERON:0003057;6.51e-10;3!UBERON:0006215;2.38e-09;3!UBERON:0010122;6.99e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;1.57e-20;82!UBERON:0006241;6.51e-10;3!UBERON:0003057;6.51e-10;3!UBERON:0006215;2.38e-09;3!UBERON:0010122;6.99e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.47e-80!82;UBERON:0001049!6.59e-78!57;UBERON:0005068!6.59e-78!57;UBERON:0006241!6.59e-78!57;UBERON:0007135!6.59e-78!57;UBERON:0005743!8.11e-78!86;UBERON:0000073!1.69e-68!94;UBERON:0001016!1.69e-68!94;UBERON:0002616!5.26e-65!59;UBERON:0002780!3.22e-62!41;UBERON:0001890!3.22e-62!41;UBERON:0006240!3.22e-62!41;UBERON:0000955!4.18e-62!69;UBERON:0006238!4.18e-62!69;UBERON:0003080!1.99e-60!42;UBERON:0003075!1.54e-57!86;UBERON:0007284!1.54e-57!86;UBERON:0002346!3.85e-56!90;UBERON:0002020!3.12e-52!34;UBERON:0003528!3.12e-52!34;UBERON:0007023!7.00e-52!115;UBERON:0001893!8.43e-52!34;UBERON:0002791!2.93e-50!33;UBERON:0001869!6.93e-49!32;UBERON:0003056!1.47e-43!61;UBERON:0000153!1.34e-38!129;UBERON:0007811!1.34e-38!129;UBERON:0000956!1.32e-37!25;UBERON:0000203!1.32e-37!25;UBERON:0004121!2.19e-37!169;UBERON:0000924!2.99e-37!173;UBERON:0006601!2.99e-37!173;UBERON:0000033!6.13e-37!123;UBERON:0002619!4.44e-34!22;UBERON:0001950!3.93e-31!20;UBERON:0000025!3.25e-19!194;UBERON:0003076!8.72e-18!15;UBERON:0003057!8.72e-18!15;UBERON:0002420!5.99e-16!9;UBERON:0007245!5.99e-16!9;UBERON:0010009!5.99e-16!9;UBERON:0010011!5.99e-16!9;UBERON:0000454!5.99e-16!9;UBERON:0002308!7.74e-16!9;UBERON:0000125!7.74e-16!9;UBERON:0004111!1.78e-14!241;UBERON:0000477!4.42e-14!286;UBERON:0004733!5.45e-13!12;UBERON:0002028!5.45e-13!12;UBERON:0007277!5.45e-13!12;UBERON:0000475!7.26e-13!365;UBERON:0009663!1.30e-12!7;UBERON:0000483!4.39e-12!309;UBERON:0004732!8.62e-12!13;UBERON:0000119!8.90e-12!312;UBERON:0001894!1.59e-11!7;UBERON:0006222!1.59e-11!7;UBERON:0001871!6.22e-11!7;UBERON:0000200!9.04e-11!6;UBERON:0002298!2.54e-10!8;UBERON:0000064!1.14e-09!219;UBERON:0002021!1.38e-09!5;UBERON:0000349!1.82e-09!5;UBERON:0001872!2.89e-09!5;UBERON:0000062!3.76e-09!511;UBERON:0002680!6.06e-09!9;UBERON:0001895!6.06e-09!9;UBERON:0010092!6.06e-09!9;UBERON:0000369!4.07e-08!4;UBERON:0002435!4.07e-08!4;UBERON:0000204!4.07e-08!4;UBERON:0010082!4.07e-08!4;UBERON:0000481!7.88e-08!347;UBERON:0003296!8.17e-07!4;UBERON:0010133!8.17e-07!4;UBERON:0000467!9.73e-07!625 | |ontology_enrichment_uberon=UBERON:0001017!6.47e-80!82;UBERON:0001049!6.59e-78!57;UBERON:0005068!6.59e-78!57;UBERON:0006241!6.59e-78!57;UBERON:0007135!6.59e-78!57;UBERON:0005743!8.11e-78!86;UBERON:0000073!1.69e-68!94;UBERON:0001016!1.69e-68!94;UBERON:0002616!5.26e-65!59;UBERON:0002780!3.22e-62!41;UBERON:0001890!3.22e-62!41;UBERON:0006240!3.22e-62!41;UBERON:0000955!4.18e-62!69;UBERON:0006238!4.18e-62!69;UBERON:0003080!1.99e-60!42;UBERON:0003075!1.54e-57!86;UBERON:0007284!1.54e-57!86;UBERON:0002346!3.85e-56!90;UBERON:0002020!3.12e-52!34;UBERON:0003528!3.12e-52!34;UBERON:0007023!7.00e-52!115;UBERON:0001893!8.43e-52!34;UBERON:0002791!2.93e-50!33;UBERON:0001869!6.93e-49!32;UBERON:0003056!1.47e-43!61;UBERON:0000153!1.34e-38!129;UBERON:0007811!1.34e-38!129;UBERON:0000956!1.32e-37!25;UBERON:0000203!1.32e-37!25;UBERON:0004121!2.19e-37!169;UBERON:0000924!2.99e-37!173;UBERON:0006601!2.99e-37!173;UBERON:0000033!6.13e-37!123;UBERON:0002619!4.44e-34!22;UBERON:0001950!3.93e-31!20;UBERON:0000025!3.25e-19!194;UBERON:0003076!8.72e-18!15;UBERON:0003057!8.72e-18!15;UBERON:0002420!5.99e-16!9;UBERON:0007245!5.99e-16!9;UBERON:0010009!5.99e-16!9;UBERON:0010011!5.99e-16!9;UBERON:0000454!5.99e-16!9;UBERON:0002308!7.74e-16!9;UBERON:0000125!7.74e-16!9;UBERON:0004111!1.78e-14!241;UBERON:0000477!4.42e-14!286;UBERON:0004733!5.45e-13!12;UBERON:0002028!5.45e-13!12;UBERON:0007277!5.45e-13!12;UBERON:0000475!7.26e-13!365;UBERON:0009663!1.30e-12!7;UBERON:0000483!4.39e-12!309;UBERON:0004732!8.62e-12!13;UBERON:0000119!8.90e-12!312;UBERON:0001894!1.59e-11!7;UBERON:0006222!1.59e-11!7;UBERON:0001871!6.22e-11!7;UBERON:0000200!9.04e-11!6;UBERON:0002298!2.54e-10!8;UBERON:0000064!1.14e-09!219;UBERON:0002021!1.38e-09!5;UBERON:0000349!1.82e-09!5;UBERON:0001872!2.89e-09!5;UBERON:0000062!3.76e-09!511;UBERON:0002680!6.06e-09!9;UBERON:0001895!6.06e-09!9;UBERON:0010092!6.06e-09!9;UBERON:0000369!4.07e-08!4;UBERON:0002435!4.07e-08!4;UBERON:0000204!4.07e-08!4;UBERON:0010082!4.07e-08!4;UBERON:0000481!7.88e-08!347;UBERON:0003296!8.17e-07!4;UBERON:0010133!8.17e-07!4;UBERON:0000467!9.73e-07!625 | ||
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|short_description=p1@LRRC4C | |short_description=p1@LRRC4C | ||
}} | }} |
Latest revision as of 23:06, 17 September 2015
Short description: | p1@LRRC4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC4C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000534577_5end |
EntrezGene: | LRRC4C |
HGNC: | 29317 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data