FFCP PHASE1:Hg19::chr22:30653669..30653690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:30653669..30653690,- | |||
|coexpression_cluster_id=C1262 | |coexpression_cluster_id=C1262 | ||
|description=CAGE_peak_at_chr22:30653669..30653690,- | |description=CAGE_peak_at_chr22:30653669..30653690,- | ||
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|ontology_enrichment_celltype=CL:0000066!7.66e-16!254;CL:1000497!5.33e-15!18;CL:0002518!5.33e-15!18;CL:1000449!4.49e-12!16;CL:1000507!1.71e-11!12;CL:1000494!1.71e-11!12;CL:0002274!1.49e-08!5;CL:0000457!1.49e-08!5;CL:0002191!1.49e-08!5;CL:0000097!1.49e-08!5;CL:0000831!1.49e-08!5;CL:0002028!1.49e-08!5;CL:0002149!6.80e-08!6;CL:0002255!6.80e-08!6;CL:0002681!7.30e-08!13;CL:0002584!7.30e-08!13 | |ontology_enrichment_celltype=CL:0000066!7.66e-16!254;CL:1000497!5.33e-15!18;CL:0002518!5.33e-15!18;CL:1000449!4.49e-12!16;CL:1000507!1.71e-11!12;CL:1000494!1.71e-11!12;CL:0002274!1.49e-08!5;CL:0000457!1.49e-08!5;CL:0002191!1.49e-08!5;CL:0000097!1.49e-08!5;CL:0000831!1.49e-08!5;CL:0002028!1.49e-08!5;CL:0002149!6.80e-08!6;CL:0002255!6.80e-08!6;CL:0002681!7.30e-08!13;CL:0002584!7.30e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.17e-25;17!CL:0002518;3.17e-25;17!CL:1000507;7.07e-24;10!CL:1000494;7.07e-24;10!CL:1000449;2.50e-19;15!CL:0002149;1.86e-15;6!CL:0002255;1.86e-15;6!CL:0002681;6.18e-11;12!CL:0002584;6.18e-11;12!CL:0000159;1.12e-08;2 | |ontology_enrichment_celltype_v019=CL:1000497;3.17e-25;17!CL:0002518;3.17e-25;17!CL:1000507;7.07e-24;10!CL:1000494;7.07e-24;10!CL:1000449;2.50e-19;15!CL:0002149;1.86e-15;6!CL:0002255;1.86e-15;6!CL:0002681;6.18e-11;12!CL:0002584;6.18e-11;12!CL:0000159;1.12e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.40e-25,17;CL:0002518,1.40e-25,17;CL:1000507,6.17e-24,10;CL:1000494,6.17e-24,10;CL:1000449,1.61e-19,15;CL:0002149,1.12e-15,6;CL:0002255,1.12e-15,6;CL:0000066,2.80e-15,253;CL:0002681,4.84e-11,12;CL:0002584,4.84e-11,12;CL:0000159,7.80e-09,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!5.23e-25!106;DOID:0050687!9.89e-24!143;DOID:162!1.19e-15!235;DOID:14566!6.20e-15!239;DOID:299!9.20e-13!25;DOID:3001!6.80e-08!6 | |ontology_enrichment_disease=DOID:305!5.23e-25!106;DOID:0050687!9.89e-24!143;DOID:162!1.19e-15!235;DOID:14566!6.20e-15!239;DOID:299!9.20e-13!25;DOID:3001!6.80e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:299;2.29e-16;25!DOID:3001;1.86e-15;6!DOID:120;7.98e-10;27!DOID:4468;4.34e-09;2!DOID:193;4.95e-09;29!DOID:4929;1.25e-08;2 | |ontology_enrichment_disease_v019=DOID:299;2.29e-16;25!DOID:3001;1.86e-15;6!DOID:120;7.98e-10;27!DOID:4468;4.34e-09;2!DOID:193;4.95e-09;29!DOID:4929;1.25e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-18,106;DOID:0050687,2.30e-18,143;DOID:299,1.48e-16,25;DOID:3001,1.12e-15,6;DOID:162,1.68e-12,235;DOID:14566,4.58e-12,239;DOID:120,7.45e-10,27;DOID:4468,4.53e-09,2;DOID:193,4.65e-09,29;DOID:4929,1.49e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!9.24e-16!26;UBERON:0004211!4.49e-12!16;UBERON:0001285!4.49e-12!16;UBERON:0007684!4.49e-12!16;UBERON:0003220!4.49e-12!16;UBERON:0004208!4.49e-12!16;UBERON:0002113!1.02e-11!27;UBERON:0003918!1.02e-11!27;UBERON:0005095!1.02e-11!27;UBERON:0007687!1.02e-11!27;UBERON:0009773!1.71e-11!12;UBERON:0001231!1.71e-11!12;UBERON:0004810!1.71e-11!12;UBERON:0006555!3.50e-11!17;UBERON:0005103!3.50e-11!17;UBERON:0000083!3.50e-11!17;UBERON:0009201!3.50e-11!17;UBERON:0004819!3.50e-11!17;UBERON:0006553!3.50e-11!17;UBERON:0003074!3.50e-11!17;UBERON:0003060!3.50e-11!17;UBERON:0003886!9.46e-11!63;UBERON:0000489!1.03e-10!32;UBERON:0005177!1.31e-10!107;UBERON:0000080!2.16e-10!18;UBERON:0002120!2.16e-10!18;UBERON:0004875!2.16e-10!18;UBERON:0005721!2.16e-10!18;UBERON:0005754!2.16e-10!18;UBERON:0007297!2.16e-10!18;UBERON:0001737!2.73e-09!9;UBERON:0004876!4.69e-09!20;UBERON:0000466!5.45e-09!126;UBERON:0002553!5.71e-09!70;UBERON:0000464!7.54e-09!104;UBERON:0002294!1.14e-08!7;UBERON:0001173!1.14e-08!7;UBERON:0004912!1.14e-08!7;UBERON:0006554!1.14e-08!44;UBERON:0003887!1.74e-08!21;UBERON:0001008!2.29e-08!45;UBERON:0000062!2.79e-08!511;UBERON:0002075!6.61e-08!18;UBERON:0001264!6.78e-08!10;UBERON:0003922!6.78e-08!10;UBERON:0003923!6.78e-08!10;UBERON:0003924!6.78e-08!10;UBERON:0003921!6.78e-08!10;UBERON:0001225!7.30e-08!13;UBERON:0008987!7.30e-08!13;UBERON:0001041!7.85e-08!98;UBERON:0002114!1.14e-07!12;UBERON:0001851!1.40e-07!16;UBERON:0002394!1.78e-07!4;UBERON:0003928!1.78e-07!4;UBERON:0005172!1.79e-07!55;UBERON:0005173!1.79e-07!55;UBERON:0003104!2.13e-07!238;UBERON:0009142!2.13e-07!238;UBERON:0003064!2.31e-07!37;UBERON:0001045!4.72e-07!11;UBERON:0000353!5.23e-07!17;UBERON:0000926!6.48e-07!448;UBERON:0004120!6.48e-07!448;UBERON:0006603!6.48e-07!448;UBERON:0000077!8.49e-07!130 | |ontology_enrichment_uberon=UBERON:0000058!9.24e-16!26;UBERON:0004211!4.49e-12!16;UBERON:0001285!4.49e-12!16;UBERON:0007684!4.49e-12!16;UBERON:0003220!4.49e-12!16;UBERON:0004208!4.49e-12!16;UBERON:0002113!1.02e-11!27;UBERON:0003918!1.02e-11!27;UBERON:0005095!1.02e-11!27;UBERON:0007687!1.02e-11!27;UBERON:0009773!1.71e-11!12;UBERON:0001231!1.71e-11!12;UBERON:0004810!1.71e-11!12;UBERON:0006555!3.50e-11!17;UBERON:0005103!3.50e-11!17;UBERON:0000083!3.50e-11!17;UBERON:0009201!3.50e-11!17;UBERON:0004819!3.50e-11!17;UBERON:0006553!3.50e-11!17;UBERON:0003074!3.50e-11!17;UBERON:0003060!3.50e-11!17;UBERON:0003886!9.46e-11!63;UBERON:0000489!1.03e-10!32;UBERON:0005177!1.31e-10!107;UBERON:0000080!2.16e-10!18;UBERON:0002120!2.16e-10!18;UBERON:0004875!2.16e-10!18;UBERON:0005721!2.16e-10!18;UBERON:0005754!2.16e-10!18;UBERON:0007297!2.16e-10!18;UBERON:0001737!2.73e-09!9;UBERON:0004876!4.69e-09!20;UBERON:0000466!5.45e-09!126;UBERON:0002553!5.71e-09!70;UBERON:0000464!7.54e-09!104;UBERON:0002294!1.14e-08!7;UBERON:0001173!1.14e-08!7;UBERON:0004912!1.14e-08!7;UBERON:0006554!1.14e-08!44;UBERON:0003887!1.74e-08!21;UBERON:0001008!2.29e-08!45;UBERON:0000062!2.79e-08!511;UBERON:0002075!6.61e-08!18;UBERON:0001264!6.78e-08!10;UBERON:0003922!6.78e-08!10;UBERON:0003923!6.78e-08!10;UBERON:0003924!6.78e-08!10;UBERON:0003921!6.78e-08!10;UBERON:0001225!7.30e-08!13;UBERON:0008987!7.30e-08!13;UBERON:0001041!7.85e-08!98;UBERON:0002114!1.14e-07!12;UBERON:0001851!1.40e-07!16;UBERON:0002394!1.78e-07!4;UBERON:0003928!1.78e-07!4;UBERON:0005172!1.79e-07!55;UBERON:0005173!1.79e-07!55;UBERON:0003104!2.13e-07!238;UBERON:0009142!2.13e-07!238;UBERON:0003064!2.31e-07!37;UBERON:0001045!4.72e-07!11;UBERON:0000353!5.23e-07!17;UBERON:0000926!6.48e-07!448;UBERON:0004120!6.48e-07!448;UBERON:0006603!6.48e-07!448;UBERON:0000077!8.49e-07!130 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0004810,6.17e-24,10;UBERON:0004211,1.61e-19,15;UBERON:0009773,1.61e-19,15;UBERON:0001231,1.61e-19,15;UBERON:0001285,1.61e-19,15;UBERON:0007684,1.61e-19,15;UBERON:0004208,1.61e-19,15;UBERON:0006555,3.45e-18,16;UBERON:0004819,3.45e-18,16;UBERON:0002113,7.05e-16,26;UBERON:0003918,7.05e-16,26;UBERON:0011143,7.05e-16,26;UBERON:0005095,7.05e-16,26;UBERON:0007687,7.05e-16,26;UBERON:0000489,1.84e-15,31;UBERON:0005177,3.97e-14,101;UBERON:0006554,1.18e-12,47;UBERON:0001008,2.52e-12,48;UBERON:0001225,4.84e-11,12;UBERON:0008987,4.84e-11,12;UBERON:0002075,1.25e-09,18;UBERON:0001264,1.42e-09,10;UBERON:0001851,1.08e-08,15;UBERON:0000353,1.08e-08,15;UBERON:0002100,6.22e-08,199;UBERON:0005172,9.17e-08,54;UBERON:0005173,9.17e-08,54;UBERON:0002417,9.68e-07,60;UBERON:0000916,9.68e-07,60 | |||
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| ||
|short_description=p@chr22:30653669..30653690,- | |short_description=p@chr22:30653669..30653690,- | ||
}} | }} |
Latest revision as of 20:05, 28 July 2015
Short description: | p@chr22:30653669..30653690, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30653669..30653690, - |
Coexpression cluster: | C1262_renal_clear_Renal_papillotubular_embryonic_mucinous_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.40e-25 | 17 |
kidney epithelial cell | 1.40e-25 | 17 |
kidney tubule cell | 6.17e-24 | 10 |
nephron tubule epithelial cell | 6.17e-24 | 10 |
epithelial cell of nephron | 1.61e-19 | 15 |
epithelial cell of uterus | 1.12e-15 | 6 |
stromal cell of endometrium | 1.12e-15 | 6 |
epithelial cell | 2.80e-15 | 253 |
kidney cortical cell | 4.84e-11 | 12 |
renal cortical epithelial cell | 4.84e-11 | 12 |
seromucus secreting cell | 7.80e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 6.17e-24 | 10 |
nephron epithelium | 1.61e-19 | 15 |
renal tubule | 1.61e-19 | 15 |
nephron tubule | 1.61e-19 | 15 |
nephron | 1.61e-19 | 15 |
uriniferous tubule | 1.61e-19 | 15 |
nephrogenic mesenchyme | 1.61e-19 | 15 |
excretory tube | 3.45e-18 | 16 |
kidney epithelium | 3.45e-18 | 16 |
kidney | 7.05e-16 | 26 |
kidney mesenchyme | 7.05e-16 | 26 |
upper urinary tract | 7.05e-16 | 26 |
kidney rudiment | 7.05e-16 | 26 |
kidney field | 7.05e-16 | 26 |
cavitated compound organ | 1.84e-15 | 31 |
trunk region element | 3.97e-14 | 101 |
urinary system structure | 1.18e-12 | 47 |
renal system | 2.52e-12 | 48 |
cortex of kidney | 4.84e-11 | 12 |
renal parenchyma | 4.84e-11 | 12 |
viscus | 1.25e-09 | 18 |
pancreas | 1.42e-09 | 10 |
cortex | 1.08e-08 | 15 |
parenchyma | 1.08e-08 | 15 |
trunk | 6.22e-08 | 199 |
abdomen element | 9.17e-08 | 54 |
abdominal segment element | 9.17e-08 | 54 |
abdominal segment of trunk | 9.68e-07 | 60 |
abdomen | 9.68e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-18 | 106 |
cell type cancer | 2.30e-18 | 143 |
adenocarcinoma | 1.48e-16 | 25 |
female reproductive endometrioid cancer | 1.12e-15 | 6 |
cancer | 1.68e-12 | 235 |
disease of cellular proliferation | 4.58e-12 | 239 |
female reproductive organ cancer | 7.45e-10 | 27 |
clear cell adenocarcinoma | 4.53e-09 | 2 |
reproductive organ cancer | 4.65e-09 | 29 |
tubular adenocarcinoma | 1.49e-08 | 2 |