FFCP PHASE1:Hg19::chr16:87636085..87636144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57338 | |EntrezGene=57338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14203 | |HGNC=14203 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9A3,B3KP13,Q8WXH2 | |UniProt=F8W9A3,B3KP13,Q8WXH2 | ||
|association_with_transcript=-354bp_to_ENST00000301008,NM_020655,uc002fkd.2_5end | |association_with_transcript=-354bp_to_ENST00000301008,NM_020655,uc002fkd.2_5end | ||
|cluster_id=chr16:87636085..87636144,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_JPH3_5end | |description=CAGE_peak_1_at_JPH3_5end | ||
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|ontology_enrichment_celltype=CL:0000540!7.63e-07!6;CL:0000031!7.63e-07!6;CL:0000404!7.63e-07!6 | |ontology_enrichment_celltype=CL:0000540!7.63e-07!6;CL:0000031!7.63e-07!6;CL:0000404!7.63e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.35e-09;5!CL:0000540;9.57e-08;6!CL:0000404;9.57e-08;6 | |ontology_enrichment_celltype_v019=CL:0002322;7.35e-09;5!CL:0000540;9.57e-08;6!CL:0000404;9.57e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.92e-09,5;CL:0000540,9.17e-08,6;CL:0000031,9.17e-08,6;CL:0000404,9.17e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.64e-19;82!CL:0000031;9.57e-08;6!UBERON:0006238;2.56e-07;10!UBERON:0006215;9.41e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;2.64e-19;82!CL:0000031;9.57e-08;6!UBERON:0006238;2.56e-07;10!UBERON:0006215;9.41e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.73e-50!82;UBERON:0005743!1.28e-49!86;UBERON:0001049!9.31e-46!57;UBERON:0005068!9.31e-46!57;UBERON:0006241!9.31e-46!57;UBERON:0007135!9.31e-46!57;UBERON:0000073!1.58e-45!94;UBERON:0001016!1.58e-45!94;UBERON:0000955!4.95e-42!69;UBERON:0006238!4.95e-42!69;UBERON:0002616!1.09e-37!59;UBERON:0002780!1.53e-37!41;UBERON:0001890!1.53e-37!41;UBERON:0006240!1.53e-37!41;UBERON:0003080!2.83e-36!42;UBERON:0002346!2.01e-33!90;UBERON:0003075!3.01e-33!86;UBERON:0007284!3.01e-33!86;UBERON:0002020!6.49e-31!34;UBERON:0003528!6.49e-31!34;UBERON:0001893!1.12e-30!34;UBERON:0002791!1.26e-29!33;UBERON:0001869!3.04e-29!32;UBERON:0003056!3.81e-25!61;UBERON:0007023!8.79e-25!115;UBERON:0002619!2.48e-24!22;UBERON:0000956!5.61e-22!25;UBERON:0000203!5.61e-22!25;UBERON:0001950!5.76e-22!20;UBERON:0000033!4.90e-20!123;UBERON:0000924!1.10e-19!173;UBERON:0006601!1.10e-19!173;UBERON:0000153!1.59e-19!129;UBERON:0007811!1.59e-19!129;UBERON:0004121!3.51e-19!169;UBERON:0000062!2.46e-11!511;UBERON:0002420!9.80e-11!9;UBERON:0007245!9.80e-11!9;UBERON:0010009!9.80e-11!9;UBERON:0010011!9.80e-11!9;UBERON:0000454!9.80e-11!9;UBERON:0003076!1.78e-10!15;UBERON:0003057!1.78e-10!15;UBERON:0002308!2.14e-10!9;UBERON:0000125!2.14e-10!9;UBERON:0000922!7.98e-10!612;UBERON:0000025!1.69e-09!194;UBERON:0000064!1.75e-09!219;UBERON:0000468!2.68e-09!659;UBERON:0009663!1.93e-08!7;UBERON:0001894!3.25e-08!7;UBERON:0006222!3.25e-08!7;UBERON:0000200!4.67e-08!6;UBERON:0004733!5.41e-08!12;UBERON:0002028!5.41e-08!12;UBERON:0007277!5.41e-08!12;UBERON:0001871!5.80e-08!7;UBERON:0001737!1.60e-07!9;UBERON:0000923!1.94e-07!604;UBERON:0005291!1.94e-07!604;UBERON:0006598!1.94e-07!604;UBERON:0002532!1.94e-07!604;UBERON:0000467!2.07e-07!625;UBERON:0000349!2.34e-07!5;UBERON:0002050!2.34e-07!605;UBERON:0005423!2.34e-07!605;UBERON:0000480!2.50e-07!626;UBERON:0004732!3.70e-07!13;UBERON:0001872!4.36e-07!5;UBERON:0002021!4.52e-07!5;UBERON:0004111!9.41e-07!241 | |ontology_enrichment_uberon=UBERON:0001017!4.73e-50!82;UBERON:0005743!1.28e-49!86;UBERON:0001049!9.31e-46!57;UBERON:0005068!9.31e-46!57;UBERON:0006241!9.31e-46!57;UBERON:0007135!9.31e-46!57;UBERON:0000073!1.58e-45!94;UBERON:0001016!1.58e-45!94;UBERON:0000955!4.95e-42!69;UBERON:0006238!4.95e-42!69;UBERON:0002616!1.09e-37!59;UBERON:0002780!1.53e-37!41;UBERON:0001890!1.53e-37!41;UBERON:0006240!1.53e-37!41;UBERON:0003080!2.83e-36!42;UBERON:0002346!2.01e-33!90;UBERON:0003075!3.01e-33!86;UBERON:0007284!3.01e-33!86;UBERON:0002020!6.49e-31!34;UBERON:0003528!6.49e-31!34;UBERON:0001893!1.12e-30!34;UBERON:0002791!1.26e-29!33;UBERON:0001869!3.04e-29!32;UBERON:0003056!3.81e-25!61;UBERON:0007023!8.79e-25!115;UBERON:0002619!2.48e-24!22;UBERON:0000956!5.61e-22!25;UBERON:0000203!5.61e-22!25;UBERON:0001950!5.76e-22!20;UBERON:0000033!4.90e-20!123;UBERON:0000924!1.10e-19!173;UBERON:0006601!1.10e-19!173;UBERON:0000153!1.59e-19!129;UBERON:0007811!1.59e-19!129;UBERON:0004121!3.51e-19!169;UBERON:0000062!2.46e-11!511;UBERON:0002420!9.80e-11!9;UBERON:0007245!9.80e-11!9;UBERON:0010009!9.80e-11!9;UBERON:0010011!9.80e-11!9;UBERON:0000454!9.80e-11!9;UBERON:0003076!1.78e-10!15;UBERON:0003057!1.78e-10!15;UBERON:0002308!2.14e-10!9;UBERON:0000125!2.14e-10!9;UBERON:0000922!7.98e-10!612;UBERON:0000025!1.69e-09!194;UBERON:0000064!1.75e-09!219;UBERON:0000468!2.68e-09!659;UBERON:0009663!1.93e-08!7;UBERON:0001894!3.25e-08!7;UBERON:0006222!3.25e-08!7;UBERON:0000200!4.67e-08!6;UBERON:0004733!5.41e-08!12;UBERON:0002028!5.41e-08!12;UBERON:0007277!5.41e-08!12;UBERON:0001871!5.80e-08!7;UBERON:0001737!1.60e-07!9;UBERON:0000923!1.94e-07!604;UBERON:0005291!1.94e-07!604;UBERON:0006598!1.94e-07!604;UBERON:0002532!1.94e-07!604;UBERON:0000467!2.07e-07!625;UBERON:0000349!2.34e-07!5;UBERON:0002050!2.34e-07!605;UBERON:0005423!2.34e-07!605;UBERON:0000480!2.50e-07!626;UBERON:0004732!3.70e-07!13;UBERON:0001872!4.36e-07!5;UBERON:0002021!4.52e-07!5;UBERON:0004111!9.41e-07!241 | ||
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| ||
|short_description=p1@JPH3 | |short_description=p1@JPH3 | ||
}} | }} |
Latest revision as of 07:51, 18 September 2015
Short description: | p1@JPH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JPH3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -354bp_to_ENST00000301008, NM_020655, uc002fkd.2_5end |
EntrezGene: | JPH3 |
HGNC: | 14203 |
UniProt: | F8W9A3B3KP13Q8WXH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.92e-09 | 5 |
neuron | 9.17e-08 | 6 |
neuroblast | 9.17e-08 | 6 |
electrically signaling cell | 9.17e-08 | 6 |