FFCP PHASE1:Hg19::chr20:21686290..21686311,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:21686290..21686311,+
|short_description=p2@PAX1
|description=CAGE_peak_2_at_PAX1_5end
|association_with_transcript=0bp_to_ENST00000398485,NM_006192,uc002w...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5075 | |EntrezGene=5075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8615 | |HGNC=8615 | ||
|TSSclassifier=strong | |||
|UniProt=P15863 | |UniProt=P15863 | ||
|association_with_transcript=0bp_to_ENST00000398485,NM_006192,uc002wsj.2,uc010zsl.1_5end | |||
|cluster_id=chr20:21686290..21686311,+ | |||
|coexpression_cluster_id=C1479 | |||
|description=CAGE_peak_2_at_PAX1_5end | |||
|id=chr20:21686290..21686311,+ | |||
|ontology_enrichment_celltype=CL:0002564!4.86e-10!3;CL:0002602!2.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002564;7.03e-24;3!CL:0002602;4.53e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.35e-24,3;CL:0002602,4.54e-17,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.36e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!4.86e-10!3;UBERON:0003068!4.86e-10!3;UBERON:0002328!4.86e-10!3;UBERON:0004880!4.86e-10!3;UBERON:0001042!1.61e-07!10;UBERON:0009145!1.61e-07!10;UBERON:0000974!1.77e-07!10;UBERON:0009568!2.02e-07!2;UBERON:0002216!2.02e-07!2;UBERON:0002209!2.02e-07!2;UBERON:0002213!2.02e-07!2;UBERON:0004267!2.02e-07!2;UBERON:0006444!2.02e-07!2;UBERON:0001995!2.02e-07!2;UBERON:0004715!2.02e-07!2;UBERON:0001468!2.02e-07!2;UBERON:0001130!2.02e-07!2;UBERON:0001066!2.02e-07!2;UBERON:0000341!3.68e-07!2;UBERON:0006562!8.62e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.99e-39;5!UBERON:0002216;3.99e-39;5!UBERON:0011134;3.99e-39;5!UBERON:0002209;3.99e-39;5!UBERON:0002213;3.99e-39;5!UBERON:0007844;3.99e-39;5!UBERON:0011138;3.99e-39;5!UBERON:0001130;3.99e-39;5!UBERON:0001066;3.99e-39;5!UBERON:0001468;3.99e-39;5!UBERON:0004905;1.91e-24;8!UBERON:0000982;1.91e-24;8!UBERON:0004770;1.91e-24;8!UBERON:0002242;7.03e-24;3!UBERON:0006444;4.53e-17;2!UBERON:0001995;4.53e-17;2!UBERON:0004715;4.53e-17;2!UBERON:0002370;6.23e-17;2!UBERON:0005058;6.23e-17;2!UBERON:0009113;6.23e-17;2!UBERON:0000341;2.56e-16;2!UBERON:0000075;3.70e-12;16!UBERON:0002418;1.09e-11;3!UBERON:0004755;1.09e-11;3!UBERON:0004765;2.19e-10;26!UBERON:0002372;1.60e-09;1!UBERON:0001961;1.60e-09;1!UBERON:0001744;1.60e-09;1!UBERON:0001042;1.60e-09;1!UBERON:0001735;1.60e-09;1!UBERON:0002346;7.43e-09;4!UBERON:0000923;7.43e-09;4!UBERON:0010316;7.43e-09;4!UBERON:0005291;7.43e-09;4!UBERON:0001389;8.49e-09;1!UBERON:0000026;8.49e-09;1!UBERON:0008784;8.49e-09;1!UBERON:0006058;8.49e-09;1!UBERON:0003663;8.49e-09;1!UBERON:0004256;8.49e-09;1!UBERON:0004708;8.49e-09;1!UBERON:0002101;8.49e-09;1!UBERON:0004709;8.49e-09;1!UBERON:0002529;8.49e-09;1!UBERON:0010538;8.49e-09;1!UBERON:0003661;8.49e-09;1!UBERON:0010890;8.49e-09;1!UBERON:0002471;8.49e-09;1!UBERON:0001383;8.49e-09;1!UBERON:0010758;8.49e-09;1!UBERON:0010707;8.49e-09;1!UBERON:0000978;8.49e-09;1!UBERON:0002103;8.49e-09;1!UBERON:0001665;8.49e-09;1!UBERON:0003823;8.49e-09;1!UBERON:0000154;8.49e-09;1!UBERON:0010709;8.49e-09;1!UBERON:0004177;2.70e-07;5!UBERON:0005057;2.70e-07;5!UBERON:0002050;3.01e-07;5!UBERON:0005423;3.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.04e-39,5;UBERON:0002216,3.04e-39,5;UBERON:0011134,3.04e-39,5;UBERON:0002209,3.04e-39,5;UBERON:0002213,3.04e-39,5;UBERON:0005856,3.04e-39,5;UBERON:0005866,3.04e-39,5;UBERON:0005863,3.04e-39,5;UBERON:0007844,3.04e-39,5;UBERON:0011138,3.04e-39,5;UBERON:0001130,3.04e-39,5;UBERON:0001066,3.04e-39,5;UBERON:0001468,3.04e-39,5;UBERON:0004905,1.62e-24,8;UBERON:0000982,1.62e-24,8;UBERON:0004770,1.62e-24,8;UBERON:0002242,5.35e-24,3;UBERON:0003068,5.35e-24,3;UBERON:0002328,5.35e-24,3;UBERON:0004880,5.35e-24,3;UBERON:0006444,4.54e-17,2;UBERON:0001995,4.54e-17,2;UBERON:0004715,4.54e-17,2;UBERON:0000341,2.19e-16,2;UBERON:0001042,6.80e-13,10;UBERON:0009145,6.80e-13,10;UBERON:0000974,9.51e-13,10;UBERON:0000075,3.41e-12,16;UBERON:0006562,9.76e-12,11;UBERON:0002418,1.09e-11,3;UBERON:0004755,1.09e-11,3;UBERON:0002372,1.60e-09,1;UBERON:0001961,1.60e-09,1;UBERON:0001744,1.60e-09,1;UBERON:0001735,1.60e-09,1;UBERON:0002370,6.48e-09,4;UBERON:0005058,6.48e-09,4;UBERON:0009113,6.48e-09,4;UBERON:0003295,6.48e-09,4;UBERON:0005562,6.48e-09,4;UBERON:0005418,8.49e-09,1;UBERON:0001389,8.49e-09,1;UBERON:0000026,8.49e-09,1;UBERON:0008784,8.49e-09,1;UBERON:0006058,8.49e-09,1;UBERON:0003663,8.49e-09,1;UBERON:0004256,8.49e-09,1;UBERON:0004708,8.49e-09,1;UBERON:0002101,8.49e-09,1;UBERON:0004709,8.49e-09,1;UBERON:0002529,8.49e-09,1;UBERON:0010538,8.49e-09,1;UBERON:0003661,8.49e-09,1;UBERON:0010890,8.49e-09,1;UBERON:0002471,8.49e-09,1;UBERON:0001383,8.49e-09,1;UBERON:0004357,8.49e-09,1;UBERON:0004347,8.49e-09,1;UBERON:0005420,8.49e-09,1;UBERON:0005732,8.49e-09,1;UBERON:0010758,8.49e-09,1;UBERON:0010707,8.49e-09,1;UBERON:0000978,8.49e-09,1;UBERON:0002103,8.49e-09,1;UBERON:0001665,8.49e-09,1;UBERON:0003823,8.49e-09,1;UBERON:0000154,8.49e-09,1;UBERON:0010709,8.49e-09,1;UBERON:0005733,8.49e-09,1;UBERON:0005730,8.49e-09,1;UBERON:0008814,4.85e-07,18;UBERON:0009722,7.07e-07,11;UBERON:0007690,7.07e-07,11;UBERON:0001557,7.67e-07,19 | |||
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| ||
|short_description=p2@PAX1 | |||
}} | }} |
Latest revision as of 18:27, 24 September 2015
Short description: | p2@PAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAX1_5end |
Coexpression cluster: | C1479_tonsil_Nucleus_thymus_Anulus_neuroectodermal_vein_throat |
Association with transcript: | 0bp_to_ENST00000398485, NM_006192, uc002wsj.2, uc010zsl.1_5end |
EntrezGene: | PAX1 |
HGNC: | 8615 |
UniProt: | P15863 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.35e-24 | 3 |
annulus pulposus cell | 4.54e-17 | 2 |