FFCP PHASE1:Hg19::chr20:33134619..33134677,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84557 | |EntrezGene=84557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6838 | |HGNC=6838 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000374837_5end | |association_with_transcript=0bp_to_ENST00000374837_5end | ||
|cluster_id=chr20:33134619..33134677,+ | |||
|description=CAGE_peak_4_at_MAP1LC3A_5end | |description=CAGE_peak_4_at_MAP1LC3A_5end | ||
|id=chr20:33134619..33134677,+ | |id=chr20:33134619..33134677,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.28e-08;2!CL:0000242;1.28e-08;2 | |ontology_enrichment_celltype_v019=CL:0000123;1.28e-08;2!CL:0000242;1.28e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.25e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.75e-13;3 | |ontology_enrichment_development_v019=UBERON:0006215;4.75e-13;3 | ||
|ontology_enrichment_disease=DOID:3119!8.13e-07!14 | |ontology_enrichment_disease=DOID:3119!8.13e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;9.85e-07;14 | |ontology_enrichment_disease_v019=DOID:3119;9.85e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,9.54e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005409;5.21e-22;22!UBERON:0000160;4.01e-20;17!UBERON:0003296;5.58e-17;4!UBERON:0010133;5.58e-17;4!UBERON:0004921;7.10e-15;33!UBERON:0004733;8.02e-15;12!UBERON:0002028;8.02e-15;12!UBERON:0004732;1.32e-13;13!UBERON:0002108;3.95e-13;4!UBERON:0002680;8.25e-11;9!UBERON:0001895;8.25e-11;9!UBERON:0002298;6.23e-10;6!UBERON:0001894;1.03e-09;7!UBERON:0001905;1.50e-09;2!UBERON:0002757;1.50e-09;2!UBERON:0010134;1.50e-09;2!UBERON:0005408;1.50e-09;2!UBERON:0001899;1.50e-09;2!UBERON:0000007;3.79e-09;2!UBERON:0000059;8.55e-09;11!UBERON:0003127;3.84e-08;2!UBERON:0001155;2.20e-07;9!UBERON:0001555;8.07e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0005409;5.21e-22;22!UBERON:0000160;4.01e-20;17!UBERON:0003296;5.58e-17;4!UBERON:0010133;5.58e-17;4!UBERON:0004921;7.10e-15;33!UBERON:0004733;8.02e-15;12!UBERON:0002028;8.02e-15;12!UBERON:0004732;1.32e-13;13!UBERON:0002108;3.95e-13;4!UBERON:0002680;8.25e-11;9!UBERON:0001895;8.25e-11;9!UBERON:0002298;6.23e-10;6!UBERON:0001894;1.03e-09;7!UBERON:0001905;1.50e-09;2!UBERON:0002757;1.50e-09;2!UBERON:0010134;1.50e-09;2!UBERON:0005408;1.50e-09;2!UBERON:0001899;1.50e-09;2!UBERON:0000007;3.79e-09;2!UBERON:0000059;8.55e-09;11!UBERON:0003127;3.84e-08;2!UBERON:0001155;2.20e-07;9!UBERON:0001555;8.07e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.69e-20,17;UBERON:0005409,3.42e-19,25;UBERON:0003296,5.81e-17,4;UBERON:0010133,5.81e-17,4;UBERON:0004733,8.02e-15,12;UBERON:0002028,8.02e-15,12;UBERON:0007277,8.02e-15,12;UBERON:0004732,1.32e-13,13;UBERON:0002108,3.83e-13,4;UBERON:0003076,1.17e-11,15;UBERON:0003057,1.17e-11,15;UBERON:0011216,1.23e-11,223;UBERON:0002680,8.69e-11,9;UBERON:0001895,8.69e-11,9;UBERON:0010092,8.69e-11,9;UBERON:0002298,6.23e-10,6;UBERON:0007023,6.56e-10,114;UBERON:0001894,1.06e-09,7;UBERON:0006222,1.06e-09,7;UBERON:0001905,1.53e-09,2;UBERON:0002757,1.53e-09,2;UBERON:0010134,1.53e-09,2;UBERON:0005408,1.53e-09,2;UBERON:0001899,1.53e-09,2;UBERON:0000007,3.87e-09,2;UBERON:0000059,8.00e-09,11;UBERON:0001007,3.22e-08,145;UBERON:0001555,3.22e-08,145;UBERON:0007026,3.22e-08,145;UBERON:0003127,3.91e-08,2;UBERON:0004921,4.83e-08,118;UBERON:0000073,6.18e-08,53;UBERON:0002616,6.18e-08,53;UBERON:0001049,2.17e-07,56;UBERON:0005068,2.17e-07,56;UBERON:0006241,2.17e-07,56;UBERON:0007135,2.17e-07,56;UBERON:0001155,2.18e-07,9;UBERON:0003075,4.42e-07,82;UBERON:0007284,4.42e-07,82;UBERON:0004119,5.51e-07,160;UBERON:0000925,5.51e-07,160;UBERON:0006595,5.51e-07,160 | |||
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|short_description=p4@MAP1LC3A | |short_description=p4@MAP1LC3A | ||
}} | }} |
Latest revision as of 07:05, 25 September 2015
Short description: | p4@MAP1LC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAP1LC3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374837_5end |
EntrezGene: | MAP1LC3A |
HGNC: | 6838 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 9.54e-07 | 14 |