FFCP PHASE1:Hg19::chr17:73874688..73874699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91107 | |EntrezGene=91107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19020 | |HGNC=19020 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LD4 | |UniProt=Q96LD4 | ||
|association_with_transcript=-32bp_to_ENST00000254816,NM_033452,uc002jpw.2_5end | |association_with_transcript=-32bp_to_ENST00000254816,NM_033452,uc002jpw.2_5end | ||
|cluster_id=chr17:73874688..73874699,- | |||
|description=CAGE_peak_4_at_TRIM47_5end | |description=CAGE_peak_4_at_TRIM47_5end | ||
|id=chr17:73874688..73874699,- | |id=chr17:73874688..73874699,- | ||
|ontology_enrichment_celltype=CL:0000066!4.90e-25!254;CL:0002078!1.55e-15!44;CL:0000115!4.73e-15!35;CL:0000213!1.46e-14!57;CL:0000215!1.46e-14!57;CL:0000220!7.25e-11!246;CL:0002321!1.18e-10!248;CL:0002139!1.78e-09!24 | |ontology_enrichment_celltype=CL:0000066!4.90e-25!254;CL:0002078!1.55e-15!44;CL:0000115!4.73e-15!35;CL:0000213!1.46e-14!57;CL:0000215!1.46e-14!57;CL:0000220!7.25e-11!246;CL:0002321!1.18e-10!248;CL:0002139!1.78e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000115;7.41e-20;36!CL:0002078;3.75e-15;45!CL:0002139;8.31e-14;24!CL:0000213;6.53e-10;58!CL:0000215;6.53e-10;58!CL:0000071;4.88e-09;18!CL:1000497;8.12e-09;17!CL:0002518;8.12e-09;17!CL:0000235;8.76e-08;6!CL:1000449;3.70e-07;15 | |ontology_enrichment_celltype_v019=CL:0000115;7.41e-20;36!CL:0002078;3.75e-15;45!CL:0002139;8.31e-14;24!CL:0000213;6.53e-10;58!CL:0000215;6.53e-10;58!CL:0000071;4.88e-09;18!CL:1000497;8.12e-09;17!CL:0002518;8.12e-09;17!CL:0000235;8.76e-08;6!CL:1000449;3.70e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.14e-23,36;CL:0002078,1.09e-22,45;CL:0000066,4.55e-21,253;CL:0000213,1.49e-16,58;CL:0000215,1.49e-16,58;CL:0002139,1.54e-13,24;CL:1000497,1.07e-09,17;CL:0002518,1.07e-09,17;CL:0000071,7.91e-09,18;CL:0002546,7.91e-09,18;CL:1000449,6.41e-08,15;CL:0000235,1.57e-07,6;CL:0002681,2.88e-07,12;CL:0002584,2.88e-07,12;CL:0002188,6.83e-07,5;CL:0002321,9.37e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;4.88e-09;18 | |ontology_enrichment_development_v019=CL:0002546;4.88e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.35e-11!107;UBERON:0002050!1.47e-11!605;UBERON:0005423!1.47e-11!605;UBERON:0000480!2.00e-11!626;UBERON:0000923!2.23e-11!604;UBERON:0005291!2.23e-11!604;UBERON:0006598!2.23e-11!604;UBERON:0002532!2.23e-11!604;UBERON:0000922!2.92e-11!612;UBERON:0000467!3.39e-11!625;UBERON:0004111!4.35e-11!241;UBERON:0000477!7.54e-11!286;UBERON:0000468!9.53e-10!659;UBERON:0004119!1.74e-09!169;UBERON:0000925!1.74e-09!169;UBERON:0006595!1.74e-09!169;UBERON:0000466!5.27e-09!126;UBERON:0000481!7.97e-09!347;UBERON:0000464!1.26e-08!104;UBERON:0000483!3.85e-08!309;UBERON:0001008!5.87e-08!45;UBERON:0006554!6.75e-08!44;UBERON:0000119!8.62e-08!312;UBERON:0003104!9.56e-08!238;UBERON:0009142!9.56e-08!238;UBERON:0000077!2.47e-07!130;UBERON:0001007!3.91e-07!155;UBERON:0001555!3.91e-07!155;UBERON:0007026!3.91e-07!155;UBERON:0000926!5.30e-07!448;UBERON:0004120!5.30e-07!448;UBERON:0006603!5.30e-07!448;UBERON:0000025!6.72e-07!194;UBERON:0000062!7.96e-07!511;UBERON:0002100!8.79e-07!216;UBERON:0003064!9.39e-07!37;UBERON:0000489!9.95e-07!32 | |ontology_enrichment_uberon=UBERON:0005177!1.35e-11!107;UBERON:0002050!1.47e-11!605;UBERON:0005423!1.47e-11!605;UBERON:0000480!2.00e-11!626;UBERON:0000923!2.23e-11!604;UBERON:0005291!2.23e-11!604;UBERON:0006598!2.23e-11!604;UBERON:0002532!2.23e-11!604;UBERON:0000922!2.92e-11!612;UBERON:0000467!3.39e-11!625;UBERON:0004111!4.35e-11!241;UBERON:0000477!7.54e-11!286;UBERON:0000468!9.53e-10!659;UBERON:0004119!1.74e-09!169;UBERON:0000925!1.74e-09!169;UBERON:0006595!1.74e-09!169;UBERON:0000466!5.27e-09!126;UBERON:0000481!7.97e-09!347;UBERON:0000464!1.26e-08!104;UBERON:0000483!3.85e-08!309;UBERON:0001008!5.87e-08!45;UBERON:0006554!6.75e-08!44;UBERON:0000119!8.62e-08!312;UBERON:0003104!9.56e-08!238;UBERON:0009142!9.56e-08!238;UBERON:0000077!2.47e-07!130;UBERON:0001007!3.91e-07!155;UBERON:0001555!3.91e-07!155;UBERON:0007026!3.91e-07!155;UBERON:0000926!5.30e-07!448;UBERON:0004120!5.30e-07!448;UBERON:0006603!5.30e-07!448;UBERON:0000025!6.72e-07!194;UBERON:0000062!7.96e-07!511;UBERON:0002100!8.79e-07!216;UBERON:0003064!9.39e-07!37;UBERON:0000489!9.95e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.52e-10;30!UBERON:0001008;3.52e-10;30!UBERON:0004638;4.88e-09;18!UBERON:0001986;4.88e-09;18!UBERON:0004852;4.88e-09;18!UBERON:0000487;5.25e-08;22!UBERON:0000489;8.01e-08;29!UBERON:0006914;1.51e-07;25!UBERON:0000353;1.54e-07;15!UBERON:0006555;3.70e-07;15!UBERON:0004819;3.70e-07;15!UBERON:0001285;3.70e-07;15!UBERON:0007684;3.70e-07;15!UBERON:0002113;4.40e-07;24!UBERON:0011143;4.40e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0006554;3.52e-10;30!UBERON:0001008;3.52e-10;30!UBERON:0004638;4.88e-09;18!UBERON:0001986;4.88e-09;18!UBERON:0004852;4.88e-09;18!UBERON:0000487;5.25e-08;22!UBERON:0000489;8.01e-08;29!UBERON:0006914;1.51e-07;25!UBERON:0000353;1.54e-07;15!UBERON:0006555;3.70e-07;15!UBERON:0004819;3.70e-07;15!UBERON:0001285;3.70e-07;15!UBERON:0007684;3.70e-07;15!UBERON:0002113;4.40e-07;24!UBERON:0011143;4.40e-07;24 | ||
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|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,6.97801167972428,0.873765488520689,0.791300934685361,0.495065411840187,0.662794751455832,0,0,0,0,0.369363174230364,0.408001382488506,1.88072832886853,0.572471974262113,0.273748850145768,0.753255837568817,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,2.75826367343678,1.8072355126695,1.47901604066715,0,0,0.587200878669695,0,0,0,3.58264758783879,6.15397965436061,4.63636021741536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.557052284425868,0,0,0,1.15282187753108,0.910415432919148,0,0.552700035571697,0,0,0.267540828089713,0,0.453237370790265,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0,1.01392563272577,0.795285947051099,1.45990461090791,0.0945348171640679,0,0,0.982343066232845,2.91436230634034,0.370784442784429,0.97364218096405,0.870648686496336,1.46253756570752,0,0,0,1.19257444420023,1.72046919021225,1.04142150482278,1.13061588384802,1.25849830862972,3.57653454522088,1.04497483268405,1.03366703667732,2.49036383880697,1.33888245105868,2.41697590265488,1.52054421143703,2.68468263302986,0,1.62028389576352,0.892997282840798,0.44905874525234,0.675668882899933,3.06633274931766,2.84779697870439,1.64881569537367,0,0,1.3082821564276,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,1.77334191099179,0,1.06748995729705,0.98667019366864,1.24484414159907,0.942974704487816,0.653847612453835,0.302714855289863,0,0,0.624320153660641,0,0.896692083310806,0.117434498643765,0.485618833104395,0.702254033511242,0.61246251376468,0.491337269247072,0.206651562351531,0,0.247266929278557,0,2.87447256726495,0.336672227908132,0.125118519871964,0,0.877955241761676,0.612975591598039,1.65261864797256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0.773043412653187,0.545492241181669,1.43402297694502,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0,0.72995471815166,0,0.643240938192885,1.38134921352481,0.464367928031979,1.44375896333917,1.53798840051797,0,0.723033089650446,0.661763836394364,0.871517776369625,0,0.808987848960987,0.392442930250692,1.15424147083917,5.90524363699719,1.40241773803446,0,2.94017422771084,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0,1.09750285408626,0,0,0.462942225792648,0.651616610620649,1.03993478527958,0,0.463721619900307,0.117408694235822,2.16549671641611,2.77791307545966,1.90254152234598,0,0,4.43190610957315,3.51006397708857,2.82399208348584,0.93733833986777,1.34385702559088,0.850650583454319,0.447792613514241,0.871901815541886,1.53353071666084,0,2.28925928434388,5.39053100406007,3.31475892859011,7.19581870530366,0.190493682876507,1.90994212779139,0,1.71072446022705,0.308482478109971,0.901029173531752,0.285826432630578,0.112131084345361,0,0.1466765716419,0.258543431515556,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,1.08524321078289,1.64648067356154,2.28015329005615,0,0,0.301439377059586,0,0.299918973546171,1.2162378064119,2.00902836572851,2.10833939483032,0.718874566474748,0,1.42636905040718,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,1.01637849688985,0,0,0.670065061337395,1.91381625495949,0.749007023947182,0,0,0.858840442033979,0,0.542530047399471,1.24782516918484,0.178428988797162,0,1.05427273493442,0.601892199455438,0,0,0,0.553107505625109,0.781952530212746,1.17480694477644,0.686286847621712,0,0,0,1.81876542867756,1.66435439510497,0.30239029332968,0.248107807818777,0,0,0,0,0,0,1.07946785661859,1.24293207719189,0.574890092096664,0,0.464841513839837,0.120859449591622,2.6065841139427,0.552485933615378,0.229628896329213,0.728364672026868,0.655622074797121,1.80479845162965,0.462092022626489,1.56869953835371,1.46139224653261,0.844413031143006,5.68666920354483,1.36074964221213,1.94324324491925,9.25363516141736,0.270946437543853,1.50506932156456,1.78413391131527,0,3.35812132083267,0.219259876645935,0,3.84675187674584,0.984043937099117,1.62689197332152,1.03041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0.650060246036521,0,0.870036464629098,1.23238893691716,0.767518373630648,0.413509717453592,0.107420244868274,0.435050081742686,0.681813019328807,0.801288320820636,1.32227932288782,1.92190067365106,0.765676274967505,1.4162089319777,0,0,0,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,1.59101623962968,0.78494864019923,0,0.274537029736055,0.353437207037059,0.606547444719948,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.136499911407986,0.424216295861138,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0,0.92947049429925,0.563391205064483,0,0.589494246078727,0,0,1.68886108238131,0.658589785919804,0.379473173765715,1.39973888097993,0.288666338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| ||
|short_description=p4@TRIM47 | |short_description=p4@TRIM47 | ||
}} | }} |
Latest revision as of 13:13, 17 September 2015
Short description: | p4@TRIM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM47_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000254816, NM_033452, uc002jpw.2_5end |
EntrezGene: | TRIM47 |
HGNC: | 19020 |
UniProt: | Q96LD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.14e-23 | 36 |
meso-epithelial cell | 1.09e-22 | 45 |
epithelial cell | 4.55e-21 | 253 |
lining cell | 1.49e-16 | 58 |
barrier cell | 1.49e-16 | 58 |
endothelial cell of vascular tree | 1.54e-13 | 24 |
kidney cell | 1.07e-09 | 17 |
kidney epithelial cell | 1.07e-09 | 17 |
blood vessel endothelial cell | 7.91e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.91e-09 | 18 |
epithelial cell of nephron | 6.41e-08 | 15 |
macrophage | 1.57e-07 | 6 |
kidney cortical cell | 2.88e-07 | 12 |
renal cortical epithelial cell | 2.88e-07 | 12 |
glomerular endothelial cell | 6.83e-07 | 5 |
embryonic cell | 9.37e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.11e-13 | 101 |
urinary system structure | 4.98e-10 | 47 |
renal system | 1.18e-09 | 48 |
blood vessel endothelium | 7.91e-09 | 18 |
endothelium | 7.91e-09 | 18 |
cardiovascular system endothelium | 7.91e-09 | 18 |
cavitated compound organ | 8.98e-09 | 31 |
abdomen element | 1.31e-08 | 54 |
abdominal segment element | 1.31e-08 | 54 |
parenchyma | 3.43e-08 | 15 |
subdivision of trunk | 3.78e-08 | 112 |
kidney | 6.18e-08 | 26 |
kidney mesenchyme | 6.18e-08 | 26 |
upper urinary tract | 6.18e-08 | 26 |
kidney rudiment | 6.18e-08 | 26 |
kidney field | 6.18e-08 | 26 |
nephron epithelium | 6.41e-08 | 15 |
renal tubule | 6.41e-08 | 15 |
nephron tubule | 6.41e-08 | 15 |
nephron | 6.41e-08 | 15 |
uriniferous tubule | 6.41e-08 | 15 |
nephrogenic mesenchyme | 6.41e-08 | 15 |
simple squamous epithelium | 8.59e-08 | 22 |
abdominal segment of trunk | 1.57e-07 | 60 |
abdomen | 1.57e-07 | 60 |
squamous epithelium | 1.83e-07 | 25 |
cortex of kidney | 2.88e-07 | 12 |
renal parenchyma | 2.88e-07 | 12 |
excretory tube | 3.15e-07 | 16 |
kidney epithelium | 3.15e-07 | 16 |