FFCP PHASE1:Hg19::chr19:40434104..40434122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:40434104..40434122,- | |||
|coexpression_cluster_id=C346 | |coexpression_cluster_id=C346 | ||
|description=CAGE_peak_at_chr19:40434104..40434122,- | |description=CAGE_peak_at_chr19:40434104..40434122,- | ||
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|ontology_enrichment_celltype=CL:0000453!3.90e-23!5;CL:0000990!9.64e-13!8;CL:0001014!6.85e-11!2;CL:0001016!6.85e-11!2;CL:0000451!2.26e-10!10 | |ontology_enrichment_celltype=CL:0000453!3.90e-23!5;CL:0000990!9.64e-13!8;CL:0001014!6.85e-11!2;CL:0001016!6.85e-11!2;CL:0000451!2.26e-10!10 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.56e-34;2!CL:0001016;1.56e-34;2!CL:0000453;1.84e-14;5!CL:0000840;3.26e-12;5!CL:0000990;1.90e-08;8!CL:0000451;4.57e-07;10 | |ontology_enrichment_celltype_v019=CL:0001014;1.56e-34;2!CL:0001016;1.56e-34;2!CL:0000453;1.84e-14;5!CL:0000840;3.26e-12;5!CL:0000990;1.90e-08;8!CL:0000451;4.57e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.56e-34,2;CL:0001016,1.56e-34,2;CL:0000453,1.84e-14,5;CL:0000840,3.26e-12,5;CL:0001029,3.26e-12,5;CL:0000990,1.90e-08,8;CL:0000451,4.57e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.66e-18;1!UBERON:0001045;7.37e-18;1 | |ontology_enrichment_development_v019=UBERON:0006242;2.66e-18;1!UBERON:0001045;7.37e-18;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-18!115;UBERON:0003127!1.68e-10!2;UBERON:0000160!1.54e-09!27;UBERON:0005409!6.89e-09!35;UBERON:0001155!9.03e-09!9;UBERON:0000059!3.56e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!1.04e-18!115;UBERON:0003127!1.68e-10!2;UBERON:0000160!1.54e-09!27;UBERON:0005409!6.89e-09!35;UBERON:0001155!9.03e-09!9;UBERON:0000059!3.56e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.05e-32;17!UBERON:0001155;1.43e-29;9!UBERON:0005409;1.35e-25;22!UBERON:0000059;2.77e-24;11!UBERON:0001154;7.37e-18;1!UBERON:0001153;7.37e-18;1!UBERON:0009854;7.37e-18;1!UBERON:0004921;1.14e-15;33!UBERON:0002108;3.37e-14;4!UBERON:0003127;1.86e-09;2!UBERON:0000341;1.86e-09;2!UBERON:0002110;5.80e-07;3!UBERON:0001555;6.17e-07;54!UBERON:0002114;8.15e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.05e-32;17!UBERON:0001155;1.43e-29;9!UBERON:0005409;1.35e-25;22!UBERON:0000059;2.77e-24;11!UBERON:0001154;7.37e-18;1!UBERON:0001153;7.37e-18;1!UBERON:0009854;7.37e-18;1!UBERON:0004921;1.14e-15;33!UBERON:0002108;3.37e-14;4!UBERON:0003127;1.86e-09;2!UBERON:0000341;1.86e-09;2!UBERON:0002110;5.80e-07;3!UBERON:0001555;6.17e-07;54!UBERON:0002114;8.15e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.40e-33,17;UBERON:0001155,1.33e-29,9;UBERON:0000059,2.61e-24,11;UBERON:0005409,1.14e-22,25;UBERON:0001154,1.03e-17,1;UBERON:0001153,1.03e-17,1;UBERON:0001045,1.03e-17,1;UBERON:0002108,3.15e-14,4;UBERON:0003127,1.86e-09,2;UBERON:0000341,2.02e-09,2;UBERON:0002110,5.80e-07,3;UBERON:0006242,5.80e-07,3;UBERON:0002114,7.70e-07,2 | |||
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| ||
|short_description=p@chr19:40434104..40434122,- | |short_description=p@chr19:40434104..40434122,- | ||
}} | }} |
Latest revision as of 07:45, 26 July 2015
Short description: | p@chr19:40434104..40434122, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:40434104..40434122, - |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.56e-34 | 2 |
immature CD1a-positive Langerhans cell | 1.56e-34 | 2 |
Langerhans cell | 1.84e-14 | 5 |
immature conventional dendritic cell | 3.26e-12 | 5 |
common dendritic progenitor | 3.26e-12 | 5 |
conventional dendritic cell | 1.90e-08 | 8 |
dendritic cell | 4.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.40e-33 | 17 |
colon | 1.33e-29 | 9 |
large intestine | 2.61e-24 | 11 |
gastrointestinal system | 1.14e-22 | 25 |
vermiform appendix | 1.03e-17 | 1 |
caecum | 1.03e-17 | 1 |
midgut | 1.03e-17 | 1 |
small intestine | 3.15e-14 | 4 |
open tracheal system trachea | 1.86e-09 | 2 |
throat | 2.02e-09 | 2 |
gallbladder | 5.80e-07 | 3 |
gall bladder primordium | 5.80e-07 | 3 |
duodenum | 7.70e-07 | 2 |