FFCP PHASE1:Hg19::chr17:72968837..72968868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283987 | |EntrezGene=283987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15736 | |HGNC=15736 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528902_5end | |association_with_transcript=0bp_to_ENST00000528902_5end | ||
|cluster_id=chr17:72968837..72968868,- | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_2_at_C17orf28_5end | |description=CAGE_peak_2_at_C17orf28_5end | ||
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|ontology_enrichment_celltype=CL:0000066!6.19e-12!254;CL:0002139!1.27e-09!24;CL:0000115!4.16e-09!35;CL:0002078!2.04e-08!44;CL:0000071!5.20e-08!18;CL:0002546!5.20e-08!18 | |ontology_enrichment_celltype=CL:0000066!6.19e-12!254;CL:0002139!1.27e-09!24;CL:0000115!4.16e-09!35;CL:0002078!2.04e-08!44;CL:0000071!5.20e-08!18;CL:0002546!5.20e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.86e-11;24!CL:0000071;3.90e-09;18!CL:0000115;7.13e-09;36!CL:1000449;4.30e-08;15!CL:1000497;3.78e-07;17!CL:0002518;3.78e-07;17!CL:0002681;4.37e-07;12!CL:0002584;4.37e-07;12 | |ontology_enrichment_celltype_v019=CL:0002139;5.86e-11;24!CL:0000071;3.90e-09;18!CL:0000115;7.13e-09;36!CL:1000449;4.30e-08;15!CL:1000497;3.78e-07;17!CL:0002518;3.78e-07;17!CL:0002681;4.37e-07;12!CL:0002584;4.37e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.87e-11,24;CL:0000115,9.94e-11,36;CL:0002078,2.12e-09,45;CL:0000071,3.82e-09,18;CL:0002546,3.82e-09,18;CL:0000066,7.00e-09,253;CL:1000449,3.25e-08,15;CL:1000497,2.39e-07,17;CL:0002518,2.39e-07,17;CL:0002681,3.87e-07,12;CL:0002584,3.87e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-10;82!CL:0002546;3.90e-09;18!UBERON:0002532;4.64e-07;206!UBERON:0010316;4.64e-07;206 | |ontology_enrichment_development_v019=UBERON:0006601;2.38e-10;82!CL:0002546;3.90e-09;18!UBERON:0002532;4.64e-07;206!UBERON:0010316;4.64e-07;206 | ||
|ontology_enrichment_disease=DOID:305!2.19e-10!106;DOID:299!4.53e-08!25;DOID:0050687!4.37e-07!143 | |ontology_enrichment_disease=DOID:305!2.19e-10!106;DOID:299!4.53e-08!25;DOID:0050687!4.37e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:299;9.46e-09;25 | |ontology_enrichment_disease_v019=DOID:299;9.46e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,1.17e-08,25;DOID:305,1.17e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.37e-38!115;UBERON:0001049!2.26e-26!57;UBERON:0005068!2.26e-26!57;UBERON:0006241!2.26e-26!57;UBERON:0007135!2.26e-26!57;UBERON:0004111!6.40e-26!241;UBERON:0005743!1.43e-24!86;UBERON:0000073!7.83e-24!94;UBERON:0001016!7.83e-24!94;UBERON:0001017!8.17e-24!82;UBERON:0000025!4.76e-23!194;UBERON:0003075!2.09e-22!86;UBERON:0007284!2.09e-22!86;UBERON:0003080!2.92e-22!42;UBERON:0002780!5.13e-22!41;UBERON:0001890!5.13e-22!41;UBERON:0006240!5.13e-22!41;UBERON:0000477!7.06e-22!286;UBERON:0002616!1.01e-21!59;UBERON:0000955!1.57e-21!69;UBERON:0006238!1.57e-21!69;UBERON:0002346!4.39e-21!90;UBERON:0001893!1.20e-18!34;UBERON:0002020!1.50e-18!34;UBERON:0003528!1.50e-18!34;UBERON:0002791!4.71e-18!33;UBERON:0003056!8.85e-18!61;UBERON:0001869!1.45e-17!32;UBERON:0000064!3.51e-17!219;UBERON:0000153!1.94e-16!129;UBERON:0007811!1.94e-16!129;UBERON:0000033!7.24e-16!123;UBERON:0000483!8.19e-16!309;UBERON:0000119!1.58e-15!312;UBERON:0004121!3.33e-15!169;UBERON:0000924!1.20e-14!173;UBERON:0006601!1.20e-14!173;UBERON:0000481!1.89e-14!347;UBERON:0002619!4.92e-14!22;UBERON:0000956!1.08e-13!25;UBERON:0000203!1.08e-13!25;UBERON:0001950!5.41e-13!20;UBERON:0005177!5.68e-10!107;UBERON:0000475!2.34e-09!365;UBERON:0000489!5.97e-09!32;UBERON:0000922!2.61e-08!612;UBERON:0000480!2.76e-08!626;UBERON:0004921!2.87e-08!129;UBERON:0004185!2.87e-08!129;UBERON:0000467!2.87e-08!625;UBERON:0000468!4.84e-08!659;UBERON:0001986!5.20e-08!18;UBERON:0004638!5.20e-08!18;UBERON:0004852!5.20e-08!18;UBERON:0001007!9.72e-08!155;UBERON:0001555!9.72e-08!155;UBERON:0007026!9.72e-08!155;UBERON:0000464!1.36e-07!104;UBERON:0004119!1.46e-07!169;UBERON:0000925!1.46e-07!169;UBERON:0006595!1.46e-07!169;UBERON:0002113!1.91e-07!27;UBERON:0003918!1.91e-07!27;UBERON:0005095!1.91e-07!27;UBERON:0007687!1.91e-07!27;UBERON:0001008!2.40e-07!45;UBERON:0002050!2.51e-07!605;UBERON:0005423!2.51e-07!605;UBERON:0000080!2.73e-07!18;UBERON:0002120!2.73e-07!18;UBERON:0004875!2.73e-07!18;UBERON:0005721!2.73e-07!18;UBERON:0005754!2.73e-07!18;UBERON:0007297!2.73e-07!18;UBERON:0000923!3.85e-07!604;UBERON:0005291!3.85e-07!604;UBERON:0006598!3.85e-07!604;UBERON:0002532!3.85e-07!604;UBERON:0000466!5.15e-07!126;UBERON:0006554!5.22e-07!44;UBERON:0000487!5.37e-07!22;UBERON:0003064!5.95e-07!37;UBERON:0003887!6.09e-07!21;UBERON:0000062!9.12e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!3.37e-38!115;UBERON:0001049!2.26e-26!57;UBERON:0005068!2.26e-26!57;UBERON:0006241!2.26e-26!57;UBERON:0007135!2.26e-26!57;UBERON:0004111!6.40e-26!241;UBERON:0005743!1.43e-24!86;UBERON:0000073!7.83e-24!94;UBERON:0001016!7.83e-24!94;UBERON:0001017!8.17e-24!82;UBERON:0000025!4.76e-23!194;UBERON:0003075!2.09e-22!86;UBERON:0007284!2.09e-22!86;UBERON:0003080!2.92e-22!42;UBERON:0002780!5.13e-22!41;UBERON:0001890!5.13e-22!41;UBERON:0006240!5.13e-22!41;UBERON:0000477!7.06e-22!286;UBERON:0002616!1.01e-21!59;UBERON:0000955!1.57e-21!69;UBERON:0006238!1.57e-21!69;UBERON:0002346!4.39e-21!90;UBERON:0001893!1.20e-18!34;UBERON:0002020!1.50e-18!34;UBERON:0003528!1.50e-18!34;UBERON:0002791!4.71e-18!33;UBERON:0003056!8.85e-18!61;UBERON:0001869!1.45e-17!32;UBERON:0000064!3.51e-17!219;UBERON:0000153!1.94e-16!129;UBERON:0007811!1.94e-16!129;UBERON:0000033!7.24e-16!123;UBERON:0000483!8.19e-16!309;UBERON:0000119!1.58e-15!312;UBERON:0004121!3.33e-15!169;UBERON:0000924!1.20e-14!173;UBERON:0006601!1.20e-14!173;UBERON:0000481!1.89e-14!347;UBERON:0002619!4.92e-14!22;UBERON:0000956!1.08e-13!25;UBERON:0000203!1.08e-13!25;UBERON:0001950!5.41e-13!20;UBERON:0005177!5.68e-10!107;UBERON:0000475!2.34e-09!365;UBERON:0000489!5.97e-09!32;UBERON:0000922!2.61e-08!612;UBERON:0000480!2.76e-08!626;UBERON:0004921!2.87e-08!129;UBERON:0004185!2.87e-08!129;UBERON:0000467!2.87e-08!625;UBERON:0000468!4.84e-08!659;UBERON:0001986!5.20e-08!18;UBERON:0004638!5.20e-08!18;UBERON:0004852!5.20e-08!18;UBERON:0001007!9.72e-08!155;UBERON:0001555!9.72e-08!155;UBERON:0007026!9.72e-08!155;UBERON:0000464!1.36e-07!104;UBERON:0004119!1.46e-07!169;UBERON:0000925!1.46e-07!169;UBERON:0006595!1.46e-07!169;UBERON:0002113!1.91e-07!27;UBERON:0003918!1.91e-07!27;UBERON:0005095!1.91e-07!27;UBERON:0007687!1.91e-07!27;UBERON:0001008!2.40e-07!45;UBERON:0002050!2.51e-07!605;UBERON:0005423!2.51e-07!605;UBERON:0000080!2.73e-07!18;UBERON:0002120!2.73e-07!18;UBERON:0004875!2.73e-07!18;UBERON:0005721!2.73e-07!18;UBERON:0005754!2.73e-07!18;UBERON:0007297!2.73e-07!18;UBERON:0000923!3.85e-07!604;UBERON:0005291!3.85e-07!604;UBERON:0006598!3.85e-07!604;UBERON:0002532!3.85e-07!604;UBERON:0000466!5.15e-07!126;UBERON:0006554!5.22e-07!44;UBERON:0000487!5.37e-07!22;UBERON:0003064!5.95e-07!37;UBERON:0003887!6.09e-07!21;UBERON:0000062!9.12e-07!511 | ||
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| ||
|short_description=p2@C17orf28 | |short_description=p2@C17orf28 | ||
}} | }} |
Latest revision as of 09:28, 17 September 2015
Short description: | p2@C17orf28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C17orf28_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000528902_5end |
EntrezGene: | C17orf28 |
HGNC: | 15736 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.87e-11 | 24 |
endothelial cell | 9.94e-11 | 36 |
meso-epithelial cell | 2.12e-09 | 45 |
blood vessel endothelial cell | 3.82e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.82e-09 | 18 |
epithelial cell | 7.00e-09 | 253 |
epithelial cell of nephron | 3.25e-08 | 15 |
kidney cell | 2.39e-07 | 17 |
kidney epithelial cell | 2.39e-07 | 17 |
kidney cortical cell | 3.87e-07 | 12 |
renal cortical epithelial cell | 3.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.17e-08 | 25 |
carcinoma | 1.17e-07 | 106 |