FFCP PHASE1:Hg19::chr1:47655966..47655990,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:47655966..47655990,-
|short_description=p2@PDZK1IP1
|description=CAGE_peak_2_at_PDZK1IP1_5end
|association_with_transcript=-195bp_to_NM_005764,uc001cqw.2_5...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10158 | |EntrezGene=10158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16887 | |HGNC=16887 | ||
|TSSclassifier=strong | |||
|UniProt=Q13113 | |UniProt=Q13113 | ||
|association_with_transcript=-195bp_to_NM_005764,uc001cqw.2_5end | |||
|cluster_id=chr1:47655966..47655990,- | |||
|description=CAGE_peak_2_at_PDZK1IP1_5end | |||
|id=chr1:47655966..47655990,- | |||
|ontology_enrichment_celltype=CL:0000066!3.01e-14!254;CL:1000507!7.63e-12!12;CL:1000494!7.63e-12!12;CL:1000497!1.63e-10!18;CL:0002518!1.63e-10!18;CL:1000449!3.64e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.12e-44;10!CL:1000494;7.12e-44;10!CL:1000497;6.90e-38;17!CL:0002518;6.90e-38;17!CL:1000449;9.08e-29;15!CL:0000239;1.43e-17;3!CL:1000615;1.43e-17;3!CL:0002306;1.43e-17;3!CL:0002681;1.54e-16;12!CL:0002584;1.54e-16;12!CL:0002621;2.90e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.20e-43,10;CL:1000494,1.20e-43,10;CL:1000497,6.87e-38,17;CL:0002518,6.87e-38,17;CL:1000449,1.28e-28,15;CL:0000239,1.61e-17,3;CL:1000615,1.61e-17,3;CL:0002306,1.61e-17,3;CL:0002681,2.24e-16,12;CL:0002584,2.24e-16,12;CL:0002621,5.22e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.23e-09;10!UBERON:0007687;2.23e-09;10!UBERON:0006298;3.46e-07;1!UBERON:0008801;8.23e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.92e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.62e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.49e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!7.63e-12!12;UBERON:0001231!7.63e-12!12;UBERON:0004810!7.63e-12!12;UBERON:0001004!8.47e-10!72;UBERON:0004119!2.80e-09!169;UBERON:0000925!2.80e-09!169;UBERON:0006595!2.80e-09!169;UBERON:0003104!6.23e-09!238;UBERON:0009142!6.23e-09!238;UBERON:0002113!1.78e-08!27;UBERON:0003918!1.78e-08!27;UBERON:0005095!1.78e-08!27;UBERON:0007687!1.78e-08!27;UBERON:0000058!2.29e-08!26;UBERON:0004211!3.64e-08!16;UBERON:0001285!3.64e-08!16;UBERON:0007684!3.64e-08!16;UBERON:0003220!3.64e-08!16;UBERON:0004208!3.64e-08!16;UBERON:0000065!4.21e-08!53;UBERON:0001007!7.34e-08!155;UBERON:0001555!7.34e-08!155;UBERON:0007026!7.34e-08!155;UBERON:0004921!1.51e-07!129;UBERON:0004185!1.51e-07!129;UBERON:0006555!1.60e-07!17;UBERON:0005103!1.60e-07!17;UBERON:0000083!1.60e-07!17;UBERON:0009201!1.60e-07!17;UBERON:0004819!1.60e-07!17;UBERON:0006553!1.60e-07!17;UBERON:0003074!1.60e-07!17;UBERON:0003060!1.60e-07!17;UBERON:0000489!2.28e-07!32;UBERON:0005172!2.94e-07!55;UBERON:0005173!2.94e-07!55;UBERON:0000080!5.88e-07!18;UBERON:0002120!5.88e-07!18;UBERON:0004875!5.88e-07!18;UBERON:0005721!5.88e-07!18;UBERON:0005754!5.88e-07!18;UBERON:0007297!5.88e-07!18;UBERON:0000466!8.68e-07!126;UBERON:0003887!9.66e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.12e-44;10!UBERON:0009773;7.12e-44;10!UBERON:0001231;7.12e-44;10!UBERON:0004810;7.12e-44;10!UBERON:0002113;5.22e-37;24!UBERON:0011143;5.22e-37;24!UBERON:0006554;8.70e-34;30!UBERON:0001008;8.70e-34;30!UBERON:0000489;3.60e-30;29!UBERON:0006555;9.08e-29;15!UBERON:0004819;9.08e-29;15!UBERON:0001285;9.08e-29;15!UBERON:0007684;9.08e-29;15!UBERON:0006853;1.43e-17;3!UBERON:0007685;1.43e-17;3!UBERON:0004134;1.43e-17;3!UBERON:0001225;1.54e-16;12!UBERON:0008987;1.54e-16;12!UBERON:0000178;4.03e-13;15!UBERON:0001851;4.03e-13;15!UBERON:0000179;4.03e-13;15!UBERON:0000463;4.03e-13;15!UBERON:0000353;4.03e-13;15!UBERON:0005172;9.11e-13;52!UBERON:0005173;9.11e-13;52!UBERON:0001829;2.48e-12;2!UBERON:0002417;5.14e-10;58!UBERON:0000916;5.14e-10;58!UBERON:0001044;5.69e-09;6!UBERON:0003293;5.69e-09;6!UBERON:0003294;5.69e-09;6!UBERON:0010047;5.69e-09;6!UBERON:0003408;5.69e-09;6!UBERON:0000167;5.69e-09;6!UBERON:0001949;2.90e-08;3!UBERON:0001736;3.46e-07;1!UBERON:0000161;4.06e-07;19!UBERON:0000166;4.06e-07;19!UBERON:0001831;8.23e-07;1!UBERON:0001567;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.20e-43,10;UBERON:0002113,4.51e-34,26;UBERON:0003918,4.51e-34,26;UBERON:0011143,4.51e-34,26;UBERON:0005095,4.51e-34,26;UBERON:0007687,4.51e-34,26;UBERON:0004211,1.28e-28,15;UBERON:0009773,1.28e-28,15;UBERON:0001231,1.28e-28,15;UBERON:0001285,1.28e-28,15;UBERON:0007684,1.28e-28,15;UBERON:0004208,1.28e-28,15;UBERON:0000489,3.80e-28,31;UBERON:0006555,9.70e-27,16;UBERON:0004819,9.70e-27,16;UBERON:0006554,1.48e-20,47;UBERON:0001008,4.58e-20,48;UBERON:0005172,1.30e-17,54;UBERON:0005173,1.30e-17,54;UBERON:0006853,1.61e-17,3;UBERON:0007685,1.61e-17,3;UBERON:0004134,1.61e-17,3;UBERON:0001225,2.24e-16,12;UBERON:0008987,2.24e-16,12;UBERON:0002417,1.47e-15,60;UBERON:0000916,1.47e-15,60;UBERON:0000178,3.75e-13,15;UBERON:0000179,3.75e-13,15;UBERON:0000463,3.75e-13,15;UBERON:0001851,5.42e-13,15;UBERON:0000353,5.42e-13,15;UBERON:0001829,1.98e-12,2;UBERON:0003103,2.18e-11,68;UBERON:0001044,4.27e-09,6;UBERON:0003293,4.27e-09,6;UBERON:0003294,4.27e-09,6;UBERON:0010047,4.27e-09,6;UBERON:0000167,4.27e-09,6;UBERON:0005177,4.38e-08,101;UBERON:0001949,5.22e-08,3;UBERON:0001736,3.78e-07,1;UBERON:0006298,3.78e-07,1;UBERON:0009569,5.08e-07,112;UBERON:0001831,6.02e-07,1;UBERON:0001567,6.02e-07,1;UBERON:0008801,6.02e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.6019245761871,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.661763836394364,0,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,2.25599806453706,1.07821471946181,1.56869953835371,1.46139224653261,1.37217117560738,0,0,0,0,0.270946437543853,2.50844886927427,1.27438136522519,4.15538004464362,1.56712328305525,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0.384380134730212,0.382838137483752,0.30347334256665,0,0,0.6970372701606,1.23213432070436,0,1.73986598415015,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0,0,0,1.33029046061003,0,1.01489521846434,4.58782324285425,2.84823593587081,1.42939065274673,0.411362273086194,1.94541993357815,0,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.898683511473268,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.544692317594951,0,0.230850775511391,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0,0,0,0,6.32994193584081,1.46909527343233,0.424059214301822,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,0.685946781900644,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,8.5110163883134,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.429642228169954,0,0,0,0,0,0,0,0.857766365499703,0.521988583930423,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0,0.578742114812744,0.506827321959218,1.53744911152768,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.739280431085226,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0.280272163313789,0,4.31855182437243,1.9110067515482,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,1.72090943528111,0,0,0,0,0.93061915699296,0,0.111855431797792,0.098150233615243,0.487671699929078,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0,0.357107877211315,0,0,0,2.2936464170227,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0,0.653150243690884,0,0.134704106029175,0.286888821570705,0,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.6019245761871,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.661763836394364,0,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,2.25599806453706,1.07821471946181,1.56869953835371,1.46139224653261,1.37217117560738,0,0,0,0,0.270946437543853,2.50844886927427,1.27438136522519,4.15538004464362,1.56712328305525,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0.384380134730212,0.382838137483752,0.30347334256665,0,0,0.6970372701606,1.23213432070436,0,1.73986598415015,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0,0,0,1.33029046061003,0,1.01489521846434,4.58782324285425,2.84823593587081,1.42939065274673,0.411362273086194,1.94541993357815,0,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.898683511473268,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.544692317594951,0,0.230850775511391,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0,0,0,0,6.32994193584081,1.46909527343233,0.424059214301822,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,0.685946781900644,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,8.5110163883134,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.429642228169954,0,0,0,0,0,0,0,0.857766365499703,0.521988583930423,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0,0.578742114812744,0.506827321959218,1.53744911152768,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.739280431085226,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0.280272163313789,0,4.31855182437243,1.9110067515482,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,1.72090943528111,0,0,0,0,0.93061915699296,0,0.111855431797792,0.098150233615243,0.487671699929078,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0,0.357107877211315,0,0,0,2.2936464170227,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0,0.653150243690884,0,0.134704106029175,0.286888821570705,0,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@PDZK1IP1 | |||
}} | }} |
Latest revision as of 09:49, 18 September 2015
Short description: | p2@PDZK1IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDZK1IP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -195bp_to_NM_005764, uc001cqw.2_5end |
EntrezGene: | PDZK1IP1 |
HGNC: | 16887 |
UniProt: | Q13113 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.20e-43 | 10 |
nephron tubule epithelial cell | 1.20e-43 | 10 |
kidney cell | 6.87e-38 | 17 |
kidney epithelial cell | 6.87e-38 | 17 |
epithelial cell of nephron | 1.28e-28 | 15 |
brush border epithelial cell | 1.61e-17 | 3 |
kidney cortex tubule cell | 1.61e-17 | 3 |
epithelial cell of proximal tubule | 1.61e-17 | 3 |
kidney cortical cell | 2.24e-16 | 12 |
renal cortical epithelial cell | 2.24e-16 | 12 |
gingival epithelial cell | 5.22e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.49e-12 | 2 |