FFCP PHASE1:Hg19::chr1:1567498..1567520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8510 | |EntrezGene=8510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7171 | |HGNC=7171 | ||
|TSSclassifier=strong | |||
|UniProt=D6REP6 | |UniProt=D6REP6 | ||
|association_with_transcript=-21bp_to_ENST00000472264_5end | |association_with_transcript=-21bp_to_ENST00000472264_5end | ||
|cluster_id=chr1:1567498..1567520,+ | |||
|coexpression_cluster_id=C2532 | |coexpression_cluster_id=C2532 | ||
|description=CAGE_peak_2_at_MMP23B_5end | |description=CAGE_peak_2_at_MMP23B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.00e-09;5!CL:0002504;2.64e-07;3!CL:1000279;2.64e-07;3!CL:1000280;2.64e-07;3 | |ontology_enrichment_celltype_v019=CL:0002322;2.00e-09;5!CL:0002504;2.64e-07;3!CL:1000279;2.64e-07;3!CL:1000280;2.64e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.81e-10,5;CL:0002504,2.65e-07,3;CL:1000279,2.65e-07,3;CL:1000280,2.65e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.71e-07;65 | |ontology_enrichment_development_v019=UBERON:0006603;5.71e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!1.32e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.28e-09;17!UBERON:0000922;3.58e-09;49!UBERON:0005409;9.03e-09;22!UBERON:0000059;2.63e-08;11!UBERON:0001155;1.20e-07;9!UBERON:0003978;3.69e-07;3!UBERON:0000946;3.69e-07;3!UBERON:0004921;4.03e-07;33!UBERON:0004151;9.17e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.28e-09;17!UBERON:0000922;3.58e-09;49!UBERON:0005409;9.03e-09;22!UBERON:0000059;2.63e-08;11!UBERON:0001155;1.20e-07;9!UBERON:0003978;3.69e-07;3!UBERON:0000946;3.69e-07;3!UBERON:0004921;4.03e-07;33!UBERON:0004151;9.17e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-09,17;UBERON:0000059,2.29e-08,11;UBERON:0001155,1.05e-07,9;UBERON:0005409,1.68e-07,25;UBERON:0003978,3.86e-07,3;UBERON:0009751,3.86e-07,3;UBERON:0000946,3.86e-07,3;UBERON:0002523,3.86e-07,3;UBERON:0005983,3.86e-07,3;UBERON:0002165,3.86e-07,3;UBERON:0002062,3.86e-07,3;UBERON:0007280,3.86e-07,3 | |||
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| ||
|short_description=p2@MMP23B | |short_description=p2@MMP23B | ||
}} | }} |
Latest revision as of 18:08, 17 September 2015
Short description: | p2@MMP23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP23B_5end |
Coexpression cluster: | C2532_Mesenchymal_Hepatic_umbilical_ovary_amniotic_diaphragm_Preadipocyte |
Association with transcript: | -21bp_to_ENST00000472264_5end |
EntrezGene: | MMP23B |
HGNC: | 7171 |
UniProt: | D6REP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.81e-10 | 5 |
enteric smooth muscle cell | 2.65e-07 | 3 |
smooth muscle cell of large intestine | 2.65e-07 | 3 |
smooth muscle cell of colon | 2.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-09 | 17 |
large intestine | 2.29e-08 | 11 |
colon | 1.05e-07 | 9 |
gastrointestinal system | 1.68e-07 | 25 |
valve | 3.86e-07 | 3 |
cardiac mesenchyme | 3.86e-07 | 3 |
cardial valve | 3.86e-07 | 3 |
tunica intima | 3.86e-07 | 3 |
heart layer | 3.86e-07 | 3 |
endocardium | 3.86e-07 | 3 |
endocardial cushion | 3.86e-07 | 3 |
presumptive endocardium | 3.86e-07 | 3 |